G169804


Basic Information

Item Value
gene id G169804
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 15136299 ~ 15456202 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU251472
GTCAAGCAGCCTAAGGTATCAAGATTTTCTCTTAAAAAATCCTAAATCAATTAGTTTTGTTGATACGATGCTattcacacaaaatataataataataataataataataatgttgccAACTATTTAACAATTTCAGCAAAAAAAGGACAGCCTGCATctttttattacatgttttaaataatgataacaatgTCTTTAAAATTATAGTACAGGGAAGGAAAAGGAAATACAGGTAATGTCTCacacaaggaaaaaaaacttacagcagCACAAATACAAGATTTGCCATACAGAAAAGCTAACTGAAAAATACAGACATAAATAAATTGCTGAACTATCTCCCATGGAGAGGGAAATCCCATTCACAtttgcacgcacacacagacacacagacacacacacacaccctttctGTGTTATATTTAACCTTTGGAGCAatctgagagaaacagaggaTGAAGGGAAAAGGAGagtgaaggagagaaagagtAACTGGTGCTAAAGAGAGATGACGAAAAGGGATAAATAGAGAAAGCTCAGAGCTCAGACATGTAATTGACTCATTTAAAGCTCCCCTGAGAAGAAAGCAAGCAGAATGTATTGTCACCATAGTGCAGATTCTGTTCTTATCGGTTACTGGTCTTTCATATAAAGTTTATGATCCAATAAAAACTAGTTATACTGTCAGACCATCAGCCAGGTTCAAAAGCATGTAGTTGTGTATCCTTTTTTTGCTGACGAAAAGGTTAGG
>TU251473
AAATCAATTAGTTTTGTTGATACGATGCTattcacacaaaatataataataataataataataataatgttgccAACTATTTAACAATTTCAGCAAAAAAAGGACAGCCTGCATctttttattacatgttttaaataatgataacaatgTCTTTAAAATTATAGTACAGGGAAGGAAAAGGAAATACAGGTAATGTCTCacacaaggaaaaaaaacttacagcagCACAAATACAAGATTTGCCATACAGAAAAGCTAACTGAAAAATACAGACATAAATAAATTGCTGAACTATCTCCCATGGAGAGGGAAATCCCATTCACAtttgcacgcacacacagacacacagacacacacacacaccctttctGTGTTATATTTAACCTTTGGAGCAatctgagagaaacagaggaTGAAGGGAAAAGGAGagtgaaggagagaaagagtAACTGGTGCTAAAGAGAGATGACGAAAAGGGATAAATAGAGAAAGCTCAGAGCTCAGACATGTAATTGACTCATTTAAAGCTCCCCTGAGAAGAAAGCAAGCAGAATGTATTGTCACCATAGTGCAGATTCTGTTCTTATCGGTTACTGGTCTTTCATATAAAGTTTATGATCCAATAAAAACTAGTTATACTGTCAGACCATCAGCCAGGTTCAAAAGCATGTAGTTGTGTATCCTTTTTTTGCTGACGAAAAGGTTAGG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU251472 True 751 lncRNA 0.35 2 15136299 15456202
TU251473 False 708 lncRNA 0.35 2 15136299 15456159

Neighbor

gene id symbol gene type direction distance location
LOC122330435 LOC107553844 coding downstream 44601 15053638 ~ 15091698 (-)
ptprjb.2 LOC107744187,LOC107688568 coding downstream 113306 14953455 ~ 15022993 (-)
LOC122330579 osbpl5,LOC107675277,LOC107549292,LOC107717812,LOC107740565,LOC107688553,LOC108439258 coding downstream 118797 14984506 ~ 15017502 (-)
LOC122331299 ptprd,LOC107564123 coding downstream 183403 14949790 ~ 14952896 (-)
cpt1ab cpt1ab,LOC107675280,LOC107553855,LOC107688557 coding downstream 251577 14869690 ~ 14884722 (-)
kcnj11 kcnj11,LOC107758740,LOC107675278,LOC107549287,LOC107576152,LOC107744183,LOC107675448 coding upstream 42115 15498317 ~ 15501750 (-)
LOC122330390 NA coding upstream 103666 15559868 ~ 15562681 (-)
LOC122330908 LOC107675294,LOC107549256,LOC107675444 coding upstream 133319 15589521 ~ 15590792 (-)
tnnt3a tnnt3a,LOC107675259,LOC107758743,LOC107549286,LOC107675470 coding upstream 209947 15666149 ~ 15671094 (-)
lsp1a LOC107758754,LOC107549254,LOC107675454 coding upstream 217982 15674184 ~ 15697503 (-)
G169783 NA non-coding downstream 213016 14918178 ~ 14923283 (-)
G169781 NA non-coding downstream 230830 14905237 ~ 14905469 (-)
G169650 NA non-coding downstream 272258 14860685 ~ 14864041 (-)
G169649 NA non-coding downstream 276517 14859304 ~ 14859782 (-)
G169640 NA non-coding downstream 347261 14788814 ~ 14789038 (-)
G169812 LOC107744184,LOC107758749,LOC107675459 non-coding upstream 33701 15489903 ~ 15494079 (-)
G169811 LOC107758749,LOC107744184 non-coding upstream 38072 15494274 ~ 15548812 (-)
G169837 NA non-coding upstream 207883 15664085 ~ 15664891 (-)
G169852 NA non-coding upstream 346749 15802951 ~ 15803612 (-)
G169908 NA non-coding upstream 605239 16061441 ~ 16065980 (-)
LOC122330438 LOC107758747,LOC107744187,LOC107549291 other downstream 83375 15029101 ~ 15052924 (-)
G169631 NA other downstream 381472 14754174 ~ 14754827 (-)
G169622 NA other downstream 447710 14687446 ~ 14688589 (-)
LOC122331294 NA other downstream 1048374 14083708 ~ 14087925 (-)
LOC122330425 NA other downstream 1143450 13992252 ~ 13992849 (-)
LOC122331105 abcc8,LOC107675473 other upstream 46419 15502621 ~ 15550803 (-)
ush1c ush1c,LOC107675293,LOC107549256,LOC107742065,LOC107675444 other upstream 128349 15584551 ~ 15602848 (-)
syt8 LOC107595270,LOC107742052,LOC107549275,LOC107758745,LOC107675261,LOC108428822,LOC103035847 other upstream 286327 15742529 ~ 15751580 (-)
LOC122330715 LOC107572180,LOC107661100,LOC103373902,LOC101175368 other upstream 998829 16455031 ~ 16457348 (-)
G169989 LOC107600734,LOC107683095,LOC107716905 other upstream 1017520 16473722 ~ 16474665 (-)

Expression


Co-expression Network