kcnj11 (kcnj11,LOC107758740,LOC107675278,LOC107549287,LOC107576152,LOC107744183,LOC107675448)


Basic Information

Item Value
gene id kcnj11
gene name kcnj11,LOC107758740,LOC107675278,LOC107549287,LOC107576152,LOC107744183,LOC107675448
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 15498317 ~ 15501750 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227651.1
GCCGGAGCGCTGGTTGTAGTGTAGCGTGTCGTTTAATTGTTAACGCAGAGCGGTTTCTAACTGTGCTAAAGTTCGCATTAGCACGCATGCCCCGTGCTGAACGAGTCTTTCTGTCCGGCCCAAAGTCACATCTGAGGATGTGCGAGAAAATATCAGGTTTCAATTGACAGGCAGCGGCAGCCGGAGCACTAAAAGCGGCGTCTTCCCGCGGGACCTCCTCACCTCccgcgagcgcgcgcgcgcgcgaagtaaagaaaaaaagcacgAGCCGCGTTACGGCTTAATAACGCGGCCGTTATTAAGCGAAGTCGTTATAGCATGGACCAGCTATGTTGTCCAGAAAAGGACTCATTCCCGAGGATTATCTGCTGACCCGCTTGGCGGAGGATGTGCTGCAGCCCAAATTCAAGACTAAAACGCGGAAAGCGCGCTTCGTCGCCAAGAACGGGACGTGCAACGTCGCGCACACGAACATCCGCGAACAAGGACGCTTTCTCCAGGACGTCTTCACTACTCTAGTGGACCTGAAATGGCTTCACACGCTGCTGATCTTCACCATGTCGTTCCTGTGCAGCTGGCTCTTGTTCGGGATGATCTGGTGGCTCGTCGCGTTCGCGCACGGGGATCTGGACGCGAAAGGGGACGACTTCGTGCCGTGCGTAACGGACATCCACTCGTTCTCCTCCGCCTTTCTGTTCTCCATCGAAGTGCAGGTGACCATCGGCTTCGGAGGGCGGATGATCACGGAGGAGTGCGTGTCGGCCATCGTGATACTGATCCTCCAAAACATCGTCGGGCTCGTGATCAACGCCATCATGCTGGGATGCATCTTCATGAAAACGGCGCAGGCGAACCGGCGCGCGGAGACGCTCATCTTCAGCAAGCACGCGGTCATCACCGTCAGGAACGACAAGCTGTGCTTCATGTTCCGCCTCGGGGACCTGAGGAAGAGCATGATCATCAGCGCCACGGTGCACATGCAGGTGGTGCGCAAAACCGTCACCAACGAAGGAGAGATCGTGCCTTTGGACCAGATCGACATCCAGATGGACAACCCGGTGGGCACCAACAGCATCTTCCTGGTGTCTCCCCTCATCATCAGCCACGTTATCGATAAAAGCAGCCCTCTGTATGATCTATCGGCGGCGGATCTGCTGCACGAGGACATCGAGGTGATCGTCGTCCTGGAGGGGGTGGTGGAGACCACCGGCATCACCACCCAAGCGCGGACCTCCTACCTGTCCGAGGAGATCCTGTGGGGGCAGAGGTTCGTGCCGACGGTGTCCGAGGAGGACGGGATGTACGCCGTGGACTACTCGAAGTTTGGGAACACGGTGAAGGTGGCGACGCCGAGCTGCAGCGCGCGTGCTTTGGATGAAGCGGGAGGGATGGAGAGCTTCAGACCGCTGGAGACCAGCGGCGCGTCGGTGAGGAGGAGAATCAGACACCAGAACACCAAAGAACTGTGAAAGAACTCTGCCATTGACCTCCTGAGACCCAAACAAAgggcgtgtgtatatatatcgtATCGGGACGCCcccttctaatgaacaggtttgacttCTTTAGTAAGTTCCATGAGCgcaaatgtgaccctggacgaCAAAACCAGTCACCAGGGCTCAGTTTTGTCAATCTACGCATCAGCCGAAAGCTGAATAAGTAAGCTTTCCATCGATTTAGGGTTTGTTGGGACAATATAAGACACTGTTTGGCCTGAGATACGACTGTTGGAAAATCTTGAAtctgaaaaatgtgaaatattgagaaaatcgccttgaATGAAGTTACTcacaatgcacttttttatACCATATTTATGATaggaaatatcttcatgaaacatctTCATATCCTAATGACTTCATGTTCTGGACAATCTTCTAATTTCATAGGAACAGTTTCTATTCTCTGCGTACAAGGCGAATGATTGATCGAGTCAGCGTGGAAGACCTCGAGCGGTCCGTGGAAACCTCTGGAGTGAAGTTAAACGCGGACTATATATGGACAAACACATTGggattcattcaaaacagaaAGGCACTTCTAAAACTCTGGCAACAAAGATGGAAACGGAattctgaaatgcatttaaaaattgcgTTTCCATCGTCGAAGAGTTTTGGACGCGTCTGAAGTGGTCGCTGGTATTCGGTGGAGCGTTCAGCTGGCTTTCTGCAGACCAGGCAAGTTCTTCCACCCTGACTGAACGGTTTCTTGTTCAGCCTTGCTTCATACCTCACACTCATGGGAATTACTGAAGTATTCAAACTTGTTGGTTGGAAGCGGAAACCTTCATATACTTTTGGcagtatagtgtgtgtgtttatattacacacacatagtgGTCTCCAAGAGTTTCAGAACATCTACAGACCTGAAAATATGGACCTTTTTGGCCTTCAAAACATGATTTCAGTTCATAACGCTCATGAAACCTGCAGATGGTTGTTCTGAGCACAGGAAAAAAATCAGATGAAGATGCTGTTTTTATCCACTTTTAATGCTAACTTTTGGTATGTCAGCCTTTTGTAGCAACGATATCTTCTGCAACTCAAGCCAAAGGCTTTTCTTTGAATGTACAGATCGGTTCCGGTTTATTTTTCCAGTTTGCTTGACGGGGTTGAGGTCTGTCCATCATTTTTCATGCTTCAGTAGATTCCTCCCGTGGCAGGTTAGTTTTCTGGGAACTAGTTAGTTTCAAAGTTTTCTTAATGCCCAATTCAACTAAATCAACAAATTAATTCGTCCACCATGGTACGTAAATGcagtacattacatttaatttatacataggtaatattaatttatgtcatttaatatttgttactttttgaaatatttttctatttgatatttttttatatgctgCTTATTAgctaacaatttattattttactgtaatcttTAACATCCATTTTTAACATCCATTTAATTTGAAATCGAtataaagtattattacaattaaataaaaaatatatgaaaattaacattaaatacaaatatttgaatgttaattatattttttacatagcCTGCTCTCTATATAGTCACTCAATAACAATTGtactatttgtttaatattttaatagcattttttaaataatcggAGATGTCTTTGTACCTCTAAAACTAGCTAAGTCCACTTTAATAAGTCTCAGGAGGTTAATGCTGCACTACCGCGTTTGTATTTACGGTCAAATGTTAGAGCAATATTCTATATtgatattgtatattttagtgAGGATAAGAAATACGGAAGCACGCGTTTTCTCTCTCTAAAGCTCTCTTGTTGAGAGACGCACGTCTGAATGAAGCTCTCAGGGGGTTGAGCGGCTGCACGTGCGTCGAGCGAGCATGACGTCTCGTATGAACGCCCTGTTTAATGCCTGCCTCGTTATAGAAATAAACCAAGCCTGTTCATTCGTACCGCG

Function

symbol description
kcnj11 Predicted to enable ATP-activated inward rectifier potassium channel activity. Acts upstream of or within type B pancreatic cell development. Predicted to be located in membrane. Predicted to be integral component of membrane. Predicted to be active in plasma membrane. Human ortholog(s) of this gene implicated in familial hyperinsulinemic hypoglycemia 2 and glucose metabolism disease (multiple). Orthologous to human KCNJ11 (potassium inwardly rectifying channel subfamily J member 11).

NR:

description
PREDICTED: ATP-sensitive inward rectifier potassium channel 11

GO:

id name namespace
GO:0071805 potassium ion transmembrane transport biological_process
GO:0034765 regulation of ion transmembrane transport biological_process
GO:0016021 integral component of membrane cellular_component
GO:0015272 ATP-activated inward rectifier potassium channel activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227651.1 True 3434 mRNA 0.46 1 15498317 15501750

Neighbor

gene id symbol gene type direction distance location
LOC122330444 LOC107758754,LOC107549254,LOC107675454 coding downstream 115594 15354142 ~ 15382723 (-)
LOC122330448 tnnt3a,LOC107675259,LOC107758743,LOC107549286,LOC107675470 coding downstream 147017 15347336 ~ 15351300 (-)
LOC122331302 ush1c,LOC107549256,LOC107675293,LOC107675444 coding downstream 219689 15264386 ~ 15278628 (-)
LOC122330446 NA coding downstream 258744 15238557 ~ 15239573 (-)
LOC122330435 LOC107553844 coding downstream 406619 15053638 ~ 15091698 (-)
LOC122330390 NA coding upstream 58118 15559868 ~ 15562681 (-)
LOC122330908 LOC107675294,LOC107549256,LOC107675444 coding upstream 87771 15589521 ~ 15590792 (-)
tnnt3a tnnt3a,LOC107675259,LOC107758743,LOC107549286,LOC107675470 coding upstream 164399 15666149 ~ 15671094 (-)
lsp1a LOC107758754,LOC107549254,LOC107675454 coding upstream 172434 15674184 ~ 15697503 (-)
LOC122330555 LOC107758744,LOC107549281,LOC107675255 coding upstream 208507 15710257 ~ 15712447 (-)
G169812 LOC107744184,LOC107758749,LOC107675459 non-coding downstream 4238 15489903 ~ 15494079 (-)
G169804 NA non-coding downstream 42115 15136299 ~ 15456202 (-)
G169783 NA non-coding downstream 575034 14918178 ~ 14923283 (-)
G169781 NA non-coding downstream 592848 14905237 ~ 14905469 (-)
G169650 NA non-coding downstream 634276 14860685 ~ 14864041 (-)
G169837 NA non-coding upstream 162335 15664085 ~ 15664891 (-)
G169852 NA non-coding upstream 301201 15802951 ~ 15803612 (-)
G169908 NA non-coding upstream 559691 16061441 ~ 16065980 (-)
G169910 LOC107675266,LOC107751276,LOC107589308 non-coding upstream 562249 16063999 ~ 16064424 (-)
G169967 NA non-coding upstream 845722 16347472 ~ 16358674 (-)
LOC122330438 LOC107758747,LOC107744187,LOC107549291 other downstream 445393 15029101 ~ 15052924 (-)
G169631 NA other downstream 743490 14754174 ~ 14754827 (-)
G169622 NA other downstream 809728 14687446 ~ 14688589 (-)
LOC122331294 NA other downstream 1410392 14083708 ~ 14087925 (-)
LOC122330425 NA other downstream 1505468 13992252 ~ 13992849 (-)
LOC122331105 abcc8,LOC107675473 other upstream 871 15502621 ~ 15550803 (-)
ush1c ush1c,LOC107675293,LOC107549256,LOC107742065,LOC107675444 other upstream 82801 15584551 ~ 15602848 (-)
syt8 LOC107595270,LOC107742052,LOC107549275,LOC107758745,LOC107675261,LOC108428822,LOC103035847 other upstream 240779 15742529 ~ 15751580 (-)
LOC122330715 LOC107572180,LOC107661100,LOC103373902,LOC101175368 other upstream 953281 16455031 ~ 16457348 (-)
G169989 LOC107600734,LOC107683095,LOC107716905 other upstream 971972 16473722 ~ 16474665 (-)

Expression


Co-expression Network