LOC122330598 (LOC107758758,LOC107675301,LOC107549274,LOC107742051,LOC107595235,LOC107675471,LOC100003291)


Basic Information

Item Value
gene id LOC122330598
gene name LOC107758758,LOC107675301,LOC107549274,LOC107742051,LOC107595235,LOC107675471,LOC100003291
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 15753791 ~ 15767683 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227752.1
gtattttccacatttttatcTCGGACGGACTGACTGCAGCGCAGCGTGAAAACTTTTTCCCGTGGGGCGGCGATCCCTACCGACAAAATCCGCTtttgctttgtaaaaaaaacacaaaatgcaagCGCATTTcgtttatatttaacaaacgTAGCGGTATAGTAAGCcttaacacagaaaaaaaaaccccgaacGTTACAGTgtccttttaattttattgtacaaACTTTGGTCGCTGTAACATCGGCTTGGACAAAAAGtggataaatgttttcctaCGTTTAGACATAAAGAGTTCCCGCACAAATTGCCGCGAGGGGGGTGACGGTATGACGTCACAGACCAGCAGCCCCAGGTCCTCCAGAGATTGACCCAGGATGGAGCTGAAGGTGTGGGTTGATGGAGTTCAGCGTGTGGTCTGCGGGGTCACAGAGGCCACCACCTGCCAGGAAGTGGTCATCGCTCTGGCTCAAGCAATTGGTCGCACGGGACGGTATACGCTGATCGAAAAATGGAGGGACACCGAGCGACACCTAGTTCCTCACGAGAGTCCGGTGGCCTCTCTGAACACTTGGGGGCAGTATGCCGGTGATGTGCAATTTATCCTACACCGCACAGGTCCGTCTCTCAATGAGTACCCCTCAACTGAAGGTCTGAATCCTCGGGGCCCAGAGCGTGGCTTGCATCGGCAGAGCCTTCCGTTGATGGCCAAGCTCCGAGCTCCAGGTGACCGTTCCCTCCGTCGACGTGAGCCACGGCGCAAGTCTCTGACCTTCACCGGTGTGCCACGCAGTCTGAGGGACATTCTTAGTGGAGGAAGGCTTAGTGACAGTAGTACCAAACAACGAGAGGTTTTAGTGAGAAGTGCTCACAATTCACCGTCAATGTCCCCTCGGTTATCGGGCCATCGCGTGGAGGATCTTACCCAACTGGTGAGACTACAGAGGGAGACTCTTTCGGTTCTAGACAGCAGGATAGAGGCGTACGAGGCAGAGCTTCGAATGCTGACTGAGAAAAGAGTTGGACTAGCGGACGACGAACTGTATGTGAAGATGACAGAGGAAGTTTCAAGGTTGGAAAAGCAGGCGCGAAGGAACAAGGTGGAGATCGAGGAAGAGGAATTCTGGGCAACCGAGCTCGAGATCGAGCGGGAGAGCGAGAGGCAGCTGCAGGAGCGCCTCCAGGAGTTGAGCAGTCGGCTGCGCGGCTGTGGCGATCTAGAACAGCGGCTGATGTCTCTGCAGGGTGTAGAGGCAGGCATAGAGGCTCAAAAGCAACATAAGGAGATCAGAGAGAGCCAGCAGGCCAGTGAGGGGGAAGTGAAGGCTAGACTTCAGAGAGTGAAAGCAGAACTCAAGGCTCAAGCTCAACACACGGCCCAGCTTGAAAACAGCTCAAGAGCGGTGGAGCGCTCACTGACCGAGTCGTGCAAGAGACTGCAGGAGAGTCAGTATGAACTGGAGCAGCTTACCAAAGAGTTGAGGCAGGTAAACCTCCAGCAGTTCATACAACAAACAGGCACCAAAGTCACGGTTCTGCCCGTGGAGCCTGGCGATGATGACTCCAGCAACACAACAGATGATAAAGaCTTTGCTGCATTAACCGGTTCATTAAAACGGCCGAGTCTATCTCATCCAGTGGTTGGCAGCATCCGTGGACTCCATAGTCCGATCTCCTCAGGTTTAAATCCTGAGGGCATCTATGTTTAAGGACTACTTGGtagaagttttttttcccattttctcCATATATGTTTGAGAcagaacacattttatttgacgCAACTTCAAGCAAAACCGAGAGTCGATTTGCTCAGCATGAAGGAGACCTTCAGTGGTATCATAAACGCctcttaaagggttagttcaccccaaaatgaaaattctgtcattaattactcaccctcatgtggttccaagaccttcattcatcgaaacacaagatatttttgatgaaatcagagagctatctgtcagcaacacaactgaaatgatccagttCCAGAAACACGATGTTAGTAAAGACATCACTAAAACATGTGGCGCAACCTACCTTTTGCaactacaagaatacttttttgtgcaaagaaaacaaaattatttagtcAAACATTCTTCTCTCCCGAGTTACAAGAAGAGAATAGAAGGGAGGAGGGGAGAAGCATGCTAAATTGTCAATTTTGTTTAGCTTCcgattttcatcaaaaatatcttaatttgtttttcgAGGATGAAGGAAGGTCTTGAGtatttaatgacagaactttccgtttgggggtgaactaactctttaaGCAGGTTTCAGTTCCCTATCATAATACTTGATCTTGATCACAAAGAGCtgcataatatttcaaatacagtttGCAATTATGCCGATTTTCGTATGTACAGTAACATTGTAGCGTCTAATCAATGTTAGAAAGTGATATCTGTAACCTTGTCGCAAAAACCCGTAGATGAAGGAGGAATTACTTTGGAAGCATaactatatttttgtattcttattTTAGACTTTGCAAACATTTGTATGAACTTTCACATTTGTGTTTACTGTTAGTGGAGATCAATCTGACCTgtgatatttagttttttttttacaattcataCTATGGTTGAATTAtcaaagtgttttattgttgaGCCAAAGACAATCACATATTTTACTTGCAATATGTTACTGCATGACCGCAAAATATTGTATTCCTTGCTTTCATTTCGCCaatgttattattgttgaaatATGCGTAAAATGTAACCGATACCGcttgaaaatgtacttttacttttaaaggaatagttcacccaaaatgaaaatgttcattaaaacatttcgGTGTCATTAAGGAATTTACATTTTGGGTGATCTGTATctttaatgttatatatgaTTTGTTTCAATATATTGAATCACAGCTGTTTAGCTTAAAGTAGTGCCTTTCTGAAATTCAACCCAAGCCATGTTAGGATCAACTTTAACGATGGTGCAAGCATGCCGACTCTGTGAATtagattatattaaatatatcatgaTGTTTTATGCTCAGACTTTGCGTCTCAGTAGATTTGGGGGTGTTTAACCTTGTTTTTGCATGtactataatttttataaacaaagaaaagctTCTAACGAAcctaaaaaaaagtctatataCAATACTGTGAATTACTATTAAACCCTAATCACCCTAAA

Function

NR:

description
PREDICTED: ras association domain-containing protein 8-like

GO: NA

KEGG:

id description
K09855 RASSF7_8; Ras association domain-containing protein 7/8

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227752.1 True 3192 mRNA 0.44 6 15753791 15767683

Neighbor

gene id symbol gene type direction distance location
LOC122330550 LOC107742063,LOC107758757,LOC107675461,LOC107675297,LOC107595234,LOC107549278 coding downstream 13937 15734148 ~ 15739854 (-)
tnni2a.1 tnni2a.1,LOC107549279,LOC107675256,LOC107758755,LOC107742056,LOC107595231 coding downstream 21769 15728901 ~ 15732022 (-)
tnni2a.2 tnni2a.2,LOC107595232,LOC107549280,LOC107742055,LOC107675462,LOC108428758,LOC108275295,LOC103035007 coding downstream 25329 15716985 ~ 15728462 (-)
LOC122330556 tnni2a.3,LOC107549283,LOC107595230,LOC107742058,LOC107675302,LOC107758756,LOC107675455 coding downstream 35915 15713048 ~ 15717876 (-)
LOC122330555 LOC107758744,LOC107549281,LOC107675255 coding downstream 41344 15710257 ~ 15712447 (-)
LOC122331076 LOC107718048,LOC107742049,LOC107675457,LOC107595237,LOC107549253,LOC107675240,LOC107683074 coding upstream 36121 15803804 ~ 16009130 (-)
LOC122331055 banp,LOC107742045,LOC107751277 coding upstream 246493 16014176 ~ 16051364 (-)
pdcd2l LOC107751282 coding upstream 284497 16052180 ~ 16056627 (-)
trnar-acg_42 NA coding upstream 288099 16055782 ~ 16055854 (-)
trnar-acg_44 NA coding upstream 289739 16057422 ~ 16057494 (-)
G169837 NA non-coding downstream 88900 15664085 ~ 15664891 (-)
G169811 LOC107758749,LOC107744184 non-coding downstream 204979 15494274 ~ 15548812 (-)
G169812 LOC107744184,LOC107758749,LOC107675459 non-coding downstream 259712 15489903 ~ 15494079 (-)
G169804 NA non-coding downstream 297589 15136299 ~ 15456202 (-)
G169783 NA non-coding downstream 830508 14918178 ~ 14923283 (-)
G169852 NA non-coding upstream 35268 15802951 ~ 15803612 (-)
G169908 NA non-coding upstream 293758 16061441 ~ 16065980 (-)
G169910 LOC107675266,LOC107751276,LOC107589308 non-coding upstream 296316 16063999 ~ 16064424 (-)
G169967 NA non-coding upstream 579789 16347472 ~ 16358674 (-)
LOC122331058 NA non-coding upstream 757355 16525038 ~ 16525745 (-)
syt8 LOC107595270,LOC107742052,LOC107549275,LOC107758745,LOC107675261,LOC108428822,LOC103035847 other downstream 2211 15742529 ~ 15751580 (-)
ush1c ush1c,LOC107675293,LOC107549256,LOC107742065,LOC107675444 other downstream 150943 15584551 ~ 15602848 (-)
G169808 NA other downstream 170156 15248955 ~ 15583635 (-)
LOC122331105 abcc8,LOC107675473 other downstream 202988 15502621 ~ 15550803 (-)
LOC122330438 LOC107758747,LOC107744187,LOC107549291 other downstream 700867 15029101 ~ 15052924 (-)
LOC122330715 LOC107572180,LOC107661100,LOC103373902,LOC101175368 other upstream 687348 16455031 ~ 16457348 (-)
G169989 LOC107600734,LOC107683095,LOC107716905 other upstream 706039 16473722 ~ 16474665 (-)
G170090 lamb1,lamb1a,LOC107703183,LOC107595246,LOC107662456,LOC107589344 other upstream 732494 16500177 ~ 16501590 (-)
LOC122331057 lamb1a,lamb1,LOC107662456,LOC107595246,LOC107703183 other upstream 769250 16536933 ~ 16565638 (-)
G170123 LOC107712515,LOC107589322 other upstream 1008151 16775834 ~ 16777239 (-)

Expression


Co-expression Network