ubl7a (ubl7a,ubl7,LOC107703185,LOC107662472,LOC108436908,LOC107595265)


Basic Information

Item Value
gene id ubl7a
gene name ubl7a,ubl7,LOC107703185,LOC107662472,LOC108436908,LOC107595265
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 16596688 ~ 16602696 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043228386.1
TTCCTGCGTGACGTCATGGCGCGCGGATGAAAACAGCCGCACGATTCTTGTTTATTTCAAAGACGGATAGCGTTTGCGGGGTCTCTAGGTTTATTCGCCGTTTCTTTGCGCCGATCACCTCCAGTCCGCGCGGCTCGATGGCGCTCGCCGACTGGCGCCTGTCCCTGAAGCTGCTGGATCAGCCTTCTCTCCCCAAGTCCGTGCTGCAGTTTCCCGAGACTGAGCCCGGAGACGTCCCTCCCGGAGAGTATCGGGTCTCCACGCTCAAGCAGCTGGTGTCAGCTCAGATCCCCGATGCCATACCAGATCCCGAGCTCATAGAATTAGTGTACTGTGGCAGAAAGCTAAAGGATGACTTGACTCTGGAGTCCTACGGGATTCAGTCGGGATCCACGGTGCACATCCTGAGAAAGTCATGGCCAGAGCCCGAGATCCATCCCGAGCCGGTGGACAAGGCTGCGGCTGCCAGGGAGTTTCGGGTCCTGCAGGCCGCTCTTCACACCAGCACTGCATACAGAGACTCGGTGTTCAAGATGCTGAACAACAAGGAGTCCCTGGACCAGATCATCGTGGCGACCCCCGGGCTGAGCAGCGATCCGGTGGCTCTGGGGGTTCTTCAGGACAAAGACCTCTTTATACAATTCACAGACCCAAACATGCTGGACACATTGGCCAATTCCCACCCGGCTCTGGTAAACGCCATCATTCTGGTGCTGCACTCGGTGGCTGGCAGCGTGCCGCCCCAGCAGAGCGCCAGCTCCTCCAGAAACGTGTCTTCCAGCTCCTACAGCGACATGCCAGGAGGTTTCCTCTTTGAAGGCATGTCTGATGACGAGGAGGACTTCCAGTCGGGGACTCGCGGAGGGCCGTCCACTCTTGCTAGTGGTTTGGCCGGCATGAGGCCAGCTTCTCTGGGTTATAACGGCGCCGTGGGCCCCAGACCCATCACTCAAAGCGAGCTGGCCACCGCTCTGGCCCTCGCCAGCACCCCTGAGAGCAGCGCTGTTACACCAACCACAGGAAACCAGGGTCCCTCTTCAGGAGTGTCCCCGATCCCTGCAGGCACTCCTATCACCAACGACCTGTTTAACCAGGCGCTGCAGCAGGCCCTGCAGGTGTCCAGCATGTCCAGCTTACACAATCAGTGGCAGTCTCAGCTCCAGCAGCTGCGGGACATGGGCATCCGCGACGAGGAGCTCATCCTGAGAGCCCTGCAGGCCACCGGCGGAGACATCCAAGCCGCCCTGGAGCTCATATTCGCCGGAGGCGCACCGTGAAGCATTCTCCGATGTTGAACCATATTACGACGTTACTGATTTACCACtacatattcaatattttaactACCTATTTGAAAGGGCGGTTTATTTTTAACTCACGTTTACATTAGTACATCGAAAGCGGCGCTATCAGCTGTTTGAAGAGTAGGCCTAGTTTATACAATACATCACGTCTGCTGTGTTAATAAAAAGTGTTCGGCTACATAATTATTGAAAGCTAAATTTTAGCTGAAGTTGGGTGTTCAGACAATcgttgttatgttatgttttttgggCCATTAATTAAAATCTTCCATAAATCCTCCCCAGAAGGTTTGGTGCTCTGTAGTCGTGTGCAATGATGAAACTTGGCATTAAATGCAATGGAGTA
>XM_043228387.1
CTTTCCTGCGTGACGTCATGGCGCGCGGATGAAAACAGCCGCACGATTCTTGTTTATTTCAAAGACGGATAGCGTTTGCGGGGTCTCTAGGTTTATTCGCCGTTTCTTTGCGCCGATCACCTCCAGTCCGCGCGGCTCGATGGCGCTCGCCGACTGGCGCCTGTCCCTGAAGCTGCTGGATCAGCCTTCTCTCCCCAAGTCCGTGCTGCAGTTTCCCGAGACTGAGCCCGGAGACGTCCCTCCCGGAGAGTATCGGGTCTCCACGCTCAAGCAGCTGGTGTCAGCTCAGATCCCCGATGCCATACCAGATCCCGAGCTCATAGAATTAGTGTACTGTGGCAGAAAGCTAAAGGATGACTTGACTCTGGAGTCCTACGGGATTCAGTCGGGATCCACGGTGCACATCCTGAGAAAGTCATGGCCAGAGCCCGAGATCCATCCCGAGCCGGTGGACAAGGCTGCGGCTGCCAGGGAGTTTCGGGTCCTGCAGGCCGCTCTTCACACCAGCACTGCATACAGAGACTCGGTGTTCAAGATGCTGAACAACAAGGAGTCCCTGGACCAGATCATCGTGGCGACCCCCGGGCTGAGCAGCGATCCGGTGGCTCTGGGGGTTCTTCAGGACAAAGACCTCTTTATACAATTCACAGACCCAAACATGCTGGACACATTGGCCAATTCCCACCCGGCTCTGGTAAACGCCATCATTCTGGTGCTGCACTCGGTGGCTGGCAGCGTGCCGCCCCAGCAGAGCGCCAGCTCCTCCAGAAACGTGTCTTCCAGCTCCTACAGCGACATGCCAGGAGGTTTCCTCTTTGAAGGCATGTCTGATGACGAGGAGGACTTCCAGTCGGGGACTCGCGGAGGGCCGTCCACTCTTGCTAGTGGTTTGGCCGGCATGAGGCCAGCTTCTCTGGGTTATAACGGCGCCGTGGGCCCCAGACCCATCACTCAAAGCGAGCTGGCCACCGCTCTGGCCCTCGCCAGCACCCCTGAGAGCAGCGCTGTTACACCAACCACAGGAAACCAGAATCAGTGGCAGTCTCAGCTCCAGCAGCTGCGGGACATGGGCATCCGCGACGAGGAGCTCATCCTGAGAGCCCTGCAGGCCACCGGCGGAGACATCCAAGCCGCCCTGGAGCTCATATTCGCCGGAGGCGCACCGTGAAGCATTCTCCGATGTTGAACCATATTACGACGTTACTGATTTACCACtacatattcaatattttaactACCTATTTGAAAGGGCGGTTTATTTTTAACTCACGTTTACATTAGTACATCGAAAGCGGCGCTATCAGCTGTTTGAAGAGTAGGCCTAGTTTATACAATACATCACGTCTGCTGTGTTAATAAAAAGTGTTCGGCTACATAATTATTGAAAGCTAAATTTTAGCTGAAGTTGGGTGTTCAGACAATcgttgttatgttatgttttttgggCCATTAATTAAAATCTTCCATAAATCCTCCCCAGAAGGTTTGGTGCTCTGTAGTCGTGTGCAATGATGAAACTTGGCATTAAATGCAATGGAGTA

Function

symbol description
ubl7a Predicted to enable polyubiquitin modification-dependent protein binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be active in cytosol. Orthologous to human UBL7 (ubiquitin like 7).
ubl7 Predicted to enable polyubiquitin modification-dependent protein binding activity. Predicted to be involved in ubiquitin-dependent protein catabolic process. Predicted to be active in cytosol.

NR:

description
PREDICTED: ubiquitin-like protein 7

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043228386.1 True 1650 mRNA 0.55 10 16596688 16602694
XM_043228387.1 False 1541 mRNA 0.54 9 16596688 16602696

Neighbor

gene id symbol gene type direction distance location
acot19 zgc:101553,LOC107703184 coding downstream 138 16588446 ~ 16596550 (-)
lamb4 lamb4,LOC107712510,LOC107589316,LOC107703192 coding downstream 13234 16566185 ~ 16583454 (-)
LOC122331314 LOC107600734,LOC107716905,LOC107683095 coding downstream 106004 16483237 ~ 16490684 (-)
LOC122331312 LOC107683095 coding downstream 113042 16473389 ~ 16483646 (-)
LOC122331045 lamb1,lamb1a,LOC107595246,LOC107739090,LOC107662456,LOC107703183 coding downstream 122783 16470780 ~ 16473905 (-)
LOC122330377 LOC107662483,LOC107739067,LOC107595271,LOC107712506,LOC107589317,LOC107703193,LOC101884359 coding upstream 5045 16607741 ~ 16618322 (-)
scamp5a scamp5,scamp5a,LOC108436905,LOC107589318,LOC107703195,LOC107662455,LOC103363822,LOC107395508 coding upstream 18275 16620971 ~ 16628483 (-)
si:ch73-330k17.3 LOC107595249,LOC107589346,LOC107739095,LOC107688943 coding upstream 34695 16637391 ~ 16641847 (-)
eif3ja eif3j,eif3ja,LOC107688938,LOC107739069,LOC107662454 coding upstream 39541 16642237 ~ 16646716 (-)
duox2 LOC107712514,LOC107662485,LOC107739108,LOC107557986,LOC107688942 coding upstream 58048 16660744 ~ 16664305 (-)
LOC122331058 NA non-coding downstream 70943 16525038 ~ 16525745 (-)
G169967 NA non-coding downstream 238014 16347472 ~ 16358674 (-)
G169908 NA non-coding downstream 530708 16061441 ~ 16065980 (-)
G169910 LOC107675266,LOC107751276,LOC107589308 non-coding downstream 532264 16063999 ~ 16064424 (-)
G169852 NA non-coding downstream 793076 15802951 ~ 15803612 (-)
G170179 tmem266,LOC107557978,LOC107739101 non-coding upstream 510773 17113469 ~ 17119681 (-)
G170176 NA non-coding upstream 517086 17119782 ~ 17125993 (-)
G170210 NA non-coding upstream 560109 17162805 ~ 17163323 (-)
G170214 NA non-coding upstream 581318 17184014 ~ 17189055 (-)
LOC122331057 lamb1a,lamb1,LOC107662456,LOC107595246,LOC107703183 other downstream 31050 16536933 ~ 16565638 (-)
G170090 lamb1,lamb1a,LOC107703183,LOC107595246,LOC107662456,LOC107589344 other downstream 95098 16500177 ~ 16501590 (-)
G169989 LOC107600734,LOC107683095,LOC107716905 other downstream 122023 16473722 ~ 16474665 (-)
LOC122330715 LOC107572180,LOC107661100,LOC103373902,LOC101175368 other downstream 139340 16455031 ~ 16457348 (-)
syt8 LOC107595270,LOC107742052,LOC107549275,LOC107758745,LOC107675261,LOC108428822,LOC103035847 other downstream 845108 15742529 ~ 15751580 (-)
G170123 LOC107712515,LOC107589322 other upstream 173138 16775834 ~ 16777239 (-)
G170177 etfa,LOC107712526,LOC107557988,LOC107688945,LOC107589358,LOC107739100 other upstream 523372 17126068 ~ 17132042 (-)
G170225 NA other upstream 622746 17225442 ~ 17226023 (-)

Expression


Co-expression Network