si:dkeyp-19e1.3 (LOC107740555,LOC107553860,LOC107688560,LOC107707557,LOC107675285,LOC107572877)


Basic Information

Item Value
gene id si:dkeyp-19e1.3
gene name LOC107740555,LOC107553860,LOC107688560,LOC107707557,LOC107675285,LOC107572877
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056723.1
NCBI id CM032092.1
chromosome length 17260642
location 14692838 ~ 14710719 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043227280.1
GCGACCGCGCATGCGCCCCCCAGCTCTCGCGCTCTCGCGCTCGGATCAGTCAGAGTTGAACCCAGAGTCGTCTGTCCACGCCGAGCGGCTTCACTATGAACACACATGGTATTTACTAACAGCCCGTGCAGCGCGTCTGGTTTCAAAGATTTTGAAATGAAGAAGGACATCGATACTCTAATAGCGGAAGAACGGGCTGAGATCATCCAAAAATATGAGAAGGGCAGGCAGGAGGGTGTGCACATTAACCCCTGGGAGGACGCCGACTACAGCATCTACAAGGTCACGGACCGCTTCGGTTTCCTGCATGAAGAGGAACTGCCAACACCGACCGCGGCGGAGGAGAAGTACAAACTCCAGGAGGttgaaagagaggaaaaatggGTTAAGATGGTGAAAAGTTGGGAGAAGTACTGCACAAGCGAAAAGATGATGAAGCGGGTATACAAGGGGATTCCCTTGAAGCTGCGCGGCCAGGCCTGGGCTCTGCTGCTGGACGTGAAAACGGTGAAAGAGGCGAATTACAGGAAGTACGAGAAAATGAAGGAACAGGCCAAGAAGTATTCGACGGAAATCAAGCAGATCGATCTGGACGTGAACAGGACCTTCAGGAACCACATCATGTTCATGGAACGCTTTGGGGTCAAACAGCAAGCTCTGTTCCATGTGCTGGCAGCGTATTCGGTCTACAACACGGAAGTGAGCTACTGTCAGGGCATGAGTCAGATCGCTGCCATTCTGCTCATGTACATGAATGAGGAAGATGCATTTTGGGCCTTATCACAGCtactgaccaatcagaaacaTGCCATGCATGGATTCTTCATCCCAGGGTTTCCCAAACTCCAGCGTTTTCAGGCTCATCATGACCAAATACTGTCCAAACTGCTTCCCAAACTCAGGAAACACTTGGATAAGGAACAGATGTCCACTGGTATCTACACAACCAAATGGTTCCTTCAGTGTTTTATCGACAGGACACCCTTTACACTCACTCTGCGCCTTTGGGACATCTACATATTAGAAGGAGAAAAAATTCTAACCGCCATGGCCTATACGCTTCTTAAATTGCACAAAAAGCATCTTCTGAAGATGTCTCTGGAGGACCTGAGGGAGTTTCTGCAAGAGCGTATTGCTTCCTCCTTCAGCATGAGCGATGATGCAGTTATTGAGCACCTACAGTCGTCAATGACAGAACTCCGCAGGATGAAGCTTGACCTCCCTCCTCCAGCCAAGGGAGATGAGTTCCCAAAGATACCCCTGGGTGAGGAGCGTCCAATAATACTGCTTCCCATAATCAAGACTGAGTGCGTACCCTTGCCACAATCGGCACACAACAATCAAACCTCAACCAAGCTTCAGACAGAAGACACCACCACCCACAAGCAAAGCACCGAAAAACACATCCCTACCATTACCTCATCTTCCCCTTTTTCAAAACACACCCACTCAACTTCCACCTCTTCACTTTCACAAGCTACACCTGAAGAACCAGGGACCTCGGTGAAGAATGTAGACGCTGCACCTGTACAAAGACCAGATCAGCATCATCAACTACTCCCAAAACCTGCCCCGTTTGCAGCAGAGACTATTTCATTGAAGAATGAATGTGTTAGTAGGCCCCTATCAGTGGTGTCTGAAGATTGGCCTCCTCCATACCAGCCACCCATTACAGATTCATCCAGTATCCACTCTTTGAATCTACCAGAATTACCTCCTCCACCTCTTCCCGGTAGCGAAGAAAGGGTTGAGCTTTCCCCTTCAGAAGAGGATGTCACATTTtgccttcctcctcctccaccactAATTACCCAACCATTGGATCTCATCTTAGAAGATCCGTCTTCGTCACCATCCTCGTATAGGTCTTATCGGCAGCTAAGCAAGTTTCCAGTCAACTTGTATGTCCCGCCATCATCAAGTGACCGGAGACCTTCCAACACCTCACATTACGACAACCTCTCAGAAGAGGAGGATCTGTCTGTGGAGAGACTACTAGAAACGGCGGCCACATTGCCGCAGAACCCAAACTTGAGTCTAATGAACACCACCCTTCCCCTTCCTCCAGAAGATGCCATGTCTCTTTCTCTACCGCCCCCTTCTATGTTCTTCTACACACCTGACTCTTCACCACTCCCTCCACCTCTTTCATGCACTGAGGCGGCAAACAGTTGGGTGAACTCAGACTGCCTTTTTCCCCAACCACCTTCTGACTTTGCAGATAAACCCACTGTTGAACCTTCAGTCCCGTGCAGTCAGGTGGTTCCAAACCAGACTGAACAAGATAAGAATCAGTCACAGCTCCCAAGGCTACCGCCCAAAAAATCACGCCCCACAGTGCTCTCTCCTGTCCACTCTGATACAGACTTCTACCGAATGCATGTTTCAAGTCATTAGTTGCCGGAGTCACACTTTTGTTATTCGATGATATCAAGTGAACTTTTTTTGGTGTTGCAAGGTTTGTTATATATGACAGATCTAAACAGGATGCTAGAATGTGTGCGTTTTATCAGTGTGTCATGCAAATTTGATATACTCGAATCCCCTTTTCTAAAAGAGAAGCAACTCCTTCCAGGGAGTCATCATGTGGTTTGAAATTCTTTCATTTCCACTGGCCACcattattgtttgttgttttctggGAGATATTGTGTCCCCATCTCAATTAGAGCAGTTGCTATTTCTTTGTCTTATGCTTTCTTGGTCGGTTTTATCTTGGTGCAatggtttctttttaaactttggttatattttgaaaatgcatccAACGATGCACATTGAAGGTTGTGGAAATTTCAACAAAGATCTTTCCACTCTAACGTAAGTTCCCTGATTACATTGAAAGGGCATTTTTTCAGTGGTCTTGCATTTGCTCAAAAAGGAACTTCCTTAGTGCTGTGAACTGCCCTCTAGCACCATCTTGTGGAAGACGGAGAAGCACagcttggtaaaaaaaaaatgtatatactggGAAACAGCCACCACACTGaatgttaaaatgaagaaaCTGTATAGTCAAGGCCATTTTATGGCTTTTGTGTAATTGTAAATAGAACAGGTTTGATTTGCACTTTGTTGTTTGTATTGAGAGcttatatttaattgcatttacattatGCTTCTCAGGTGTTGATGTTCAGTTCGTGTTGAAACTTTTAAACCCGATTTAACGTTTGAACTTTTTGAACTCCATGCTCATTTGACTTTTGATTAAcaacttcaaaacaaaa

Function

NR:

description
formin-like protein 5

GO: NA

KEGG:

id description
K20133 USP6NL; USP6 N-terminal-like protein

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043227280.1 True 3230 mRNA 0.46 14 14692838 14710719

Neighbor

gene id symbol gene type direction distance location
tmem86a tmem86a,LOC107707555,LOC107675270,LOC107688565,LOC107709947 coding downstream 14194 14668409 ~ 14678644 (-)
b4galnt4a b4galnt4a,LOC107675269,LOC107688567,LOC107709930,LOC107558306,LOC107562842,LOC107707534 coding downstream 35477 14546349 ~ 14657361 (-)
abtb2b abtb2,abtb2b,LOC107675288,LOC107688574,LOC107558307 coding downstream 150081 14502446 ~ 14542757 (-)
ldha ldha,LOC107707550,LOC107562837,LOC107558315,LOC107675667 coding downstream 386487 14300230 ~ 14306351 (-)
LOC122330316 mlkl coding downstream 426690 14261504 ~ 14266148 (-)
mrpl23 mrpl23,LOC107675287,LOC107688558,LOC107553857,LOC107740558,LOC108439253,LOC107572752,LOC108275360 coding upstream 98062 14808781 ~ 14826680 (-)
cpt1ab cpt1ab,LOC107675280,LOC107553855,LOC107688557 coding upstream 158971 14869690 ~ 14884722 (-)
LOC122331299 ptprd,LOC107564123 coding upstream 239071 14949790 ~ 14952896 (-)
ptprjb.2 LOC107744187,LOC107688568 coding upstream 242736 14953455 ~ 15022993 (-)
LOC122330579 osbpl5,LOC107675277,LOC107549292,LOC107717812,LOC107740565,LOC107688553,LOC108439258 coding upstream 273787 14984506 ~ 15017502 (-)
G169624 NA non-coding downstream 3056 14688823 ~ 14689782 (-)
G169619 spty2d1,LOC107675289 non-coding downstream 7017 14682287 ~ 14685821 (-)
G169577 NA non-coding downstream 33675 14658937 ~ 14659163 (-)
G169557 NA non-coding downstream 374738 14317778 ~ 14318100 (-)
G169554 NA non-coding downstream 384062 14308355 ~ 14308776 (-)
G169640 NA non-coding upstream 78095 14788814 ~ 14789038 (-)
G169649 NA non-coding upstream 148585 14859304 ~ 14859782 (-)
G169650 NA non-coding upstream 149966 14860685 ~ 14864041 (-)
G169781 NA non-coding upstream 194518 14905237 ~ 14905469 (-)
G169783 NA non-coding upstream 207459 14918178 ~ 14923283 (-)
G169622 NA other downstream 4249 14687446 ~ 14688589 (-)
LOC122331294 NA other downstream 604913 14083708 ~ 14087925 (-)
LOC122330425 NA other downstream 699989 13992252 ~ 13992849 (-)
LOC122331290 NA other downstream 702925 13989336 ~ 13989913 (-)
G169503 si:dkey-234i14.9 other downstream 720834 13971429 ~ 13972004 (-)
G169631 NA other upstream 43455 14754174 ~ 14754827 (-)
LOC122330438 LOC107758747,LOC107744187,LOC107549291 other upstream 318382 15029101 ~ 15052924 (-)
G169808 NA other upstream 538236 15248955 ~ 15583635 (-)
LOC122331105 abcc8,LOC107675473 other upstream 791902 15502621 ~ 15550803 (-)
ush1c ush1c,LOC107675293,LOC107549256,LOC107742065,LOC107675444 other upstream 873832 15584551 ~ 15602848 (-)

Expression


Co-expression Network