G171269 (mgat5b,LOC107562046,LOC107743022,LOC108274344)


Basic Information

Item Value
gene id G171269
gene name mgat5b,LOC107562046,LOC107743022,LOC108274344
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 5145154 ~ 5155135 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU253587
GACACTTTGAATACCGGGTCTTACCCTCCGGGCTTACCAATGCCCCAGCTGTCTTCCAGGCCCTGATCAACGACGTGTTGAGGGACATGGTAAACAGGGTAAGGAGAAACTCCTGACAATCTTACACCGCTACATGGACATCCACGGGACAGTGTACTATGAGGCCCAGAGGCCCCAGAGGTGCCCGCTTTTGTCAGGAACCACGGTTTACTGCCCCAGCAGGAGCTACAGCAGCTTCTGAGGAAGGCTAAGCTCTTCTTGGGGTTTGGCTTTCCCTATGAGGGCCCCGCCCCTTTAGAGGCAATAGCCAATGGCTGCGTGTTCCTGCAGCCAATGTTTAGCCCTCCTCGCAGCTCCCTCAACCACGAGTTCTTCAGAGGGAAGCCTACGTCCAGAGAGGTGTCATCTCAGCACCCGTACACTGAACAGTACATCGGCAAACCCCACGTCATAACAGTAGACTTCAACAACTCTCAAGAATTCGAGACAGCTGTTCAAGATATTCTCAAAGAGAAGGTGGAGCCCTTATTACCGTATGAGTACACTTGCGAGGGCATGCTGGAGAGAGTGAACGCTTACATCACACATCAGgatttTTGCAGCCGCAGCGGCCCGTTCCCCGCAGCCAACGAATCCAAACTGTGGCCTGGGAATCCACCCAGTCCTTTTCTCCAGCTGCCCAACTCCACAGCTTTGATCTGGGCTCCCAACATCAGTGCTCCGGCCTGCTGGCCGCCCCTCAGCGCCCTCCGGCTCTTCCTGTCTCCAGAGGACTCCTCCTGTGTGAAAACCTGCCAGGATGCGGGTCTAATCTGCGAGCCAGCTTACTTTCCTTTCATCAACAATATGGAGGCCTTCAATGGGCTTAACGCTCAGTGTGAGTCGCTAGAAGCGGAGAAGAACCACGTGTTTCCAGCCGTGCATGTGGACAGG

Function

symbol description
mgat5b Enables alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity and manganese ion binding activity. Involved in protein O-linked glycosylation via serine. Predicted to be located in Golgi membrane. Predicted to be integral component of membrane. Predicted to be active in Golgi apparatus.

NR:

description
PREDICTED: alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253587 True 933 TUCP 0.55 7 5145154 5155135

Neighbor

gene id symbol gene type direction distance location
LOC122331702 NA coding upstream 85979 5056236 ~ 5059175 (+)
LOC122331667 NA coding upstream 135638 5009042 ~ 5009516 (+)
LOC122331699 LOC107573535,LOC107571679,LOC107574960,LOC107710299 coding upstream 184083 4943597 ~ 4961071 (+)
LOC122331573 NA coding upstream 298565 4845145 ~ 4846589 (+)
LOC122331584 LOC107661924,LOC107571811,LOC107758410,LOC107571812 coding upstream 333230 4807851 ~ 4811924 (+)
G171221 NA non-coding upstream 62310 5082571 ~ 5082844 (+)
LOC122331705 NA non-coding upstream 137064 5005627 ~ 5008090 (+)
G171208 NA non-coding upstream 153094 4987348 ~ 4992060 (+)
LOC122331696 NA non-coding upstream 259955 4882361 ~ 4885199 (+)
G171149 NA non-coding upstream 441657 4702419 ~ 4703497 (+)
G171281 NA non-coding downstream 869 5156004 ~ 5156723 (+)
G171289 NA non-coding downstream 15062 5170197 ~ 5170636 (+)
proza proza,LOC107573529,LOC107732003,LOC107576663,LOC107680190,LOC108438900 other upstream 956901 4182175 ~ 4188253 (+)
G170961 NA other upstream 976124 4168634 ~ 4169030 (+)
G170953 NA other upstream 1040024 4104474 ~ 4105130 (+)
G170923 NA other upstream 1170352 3973639 ~ 3974802 (+)
LOC122331563 NA other upstream 1748331 3122302 ~ 3396823 (+)
LOC122331671 NA other downstream 5338 5160473 ~ 5168105 (+)

Expression


Co-expression Network