G170923


Basic Information

Item Value
gene id G170923
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 3973639 ~ 3974802 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU253118
GTGGAGCTCCGcctactgcacatcggctgaggatgagctgatcatccacctggggctgctggatctgcaaagggagctggacgATATGGACTTGGAcatagactgggcacctcccctgtatcctgagttcctgttcccgttcagctccgtcccgttccgatgcccgcgccacgtgcgctcccagttttcccaccctcccacccctGGTCATACCACGttgatggatcccagcagcccctgcgctcatcctcagctctccatcaggagctcgccacgggtctgccggtctccatcgccgtcgagggtgaaggatccctcgcctcgccgtcctgcctccgagacccagactcctcctcggctcgtagacccgtcggctccccctgggctcctagctccctcctctacaccgtggtccgtcagtccaccagctccaccaggctccatcgtccctccggctccgccttggtctgtcgtcgaccatccgtcgcctcgggattcctctcctccggcttcgcctcgtcactccatcccaccggctctgtcaggctcctccttccctccagcttcacctcagtcgctctggctctgccgcgtccttcccgtcccccgtctccgtgtcagtcgccgaagcctgcggcgtcgccttggacctccagcgcctcgacgtcaccctggctcttcggctctccgtctccacttcagtctcctccaccacctgctccgctgcagtcggtcggccccatggagtcgatggctgctcctcctccatggctcctccctccgtcgactccaccttggaccaccatagctgggctctggatctcctcctgctccggactcctcctgtctccttcctggctcctccctccgtcgactccaccttggaccaccatagctgggctctggatctcctcctgctccggactcctcctgtcttctccctggctcctccctccatctgttcctccctggactgtctgtttactccctcctgggggccgtcctccaccagaacctcctcccaagatccggtatcccAACTTcctagttttgtttgttttgatgttacccttta

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253118 True 1075 TUCP 0.63 2 3973639 3974802

Neighbor

gene id symbol gene type direction distance location
LOC122331551 NA coding upstream 1252 3964279 ~ 3972387 (+)
LOC122331511 NA coding upstream 33821 3932183 ~ 3939818 (+)
LOC122331524 NA coding upstream 86304 3883495 ~ 3887335 (+)
LOC122331553 NA coding upstream 142449 3827259 ~ 3831190 (+)
LOC122331583 NA coding upstream 172832 3792277 ~ 3800807 (+)
LOC122331548 NA coding downstream 113103 4087905 ~ 4091116 (+)
LOC122331590 NA coding downstream 201669 4176471 ~ 4178576 (+)
LOC122331578 NA coding downstream 203773 4178575 ~ 4179598 (+)
gprc5ba gprc5b,gprc5ba,LOC107721060,LOC107670358,LOC107574037 coding downstream 215558 4190360 ~ 4210087 (+)
LOC122331545 NA coding downstream 411368 4386170 ~ 4389274 (+)
G170934 NA non-coding upstream 42417 3930494 ~ 3931222 (+)
LOC122331627 NA non-coding upstream 44870 3928403 ~ 3928769 (+)
LOC122331631 NA non-coding upstream 245684 3724811 ~ 3727955 (+)
LOC122331633 NA non-coding upstream 332193 3640895 ~ 3641446 (+)
G170921 NA non-coding upstream 333623 3638171 ~ 3640016 (+)
G170939 NA non-coding downstream 37852 4012654 ~ 4013010 (+)
G170940 NA non-coding downstream 38641 4013443 ~ 4013756 (+)
G170944 NA non-coding downstream 67937 4042739 ~ 4043368 (+)
G170945 NA non-coding downstream 79838 4054640 ~ 4054854 (+)
G170956 NA non-coding downstream 138459 4113261 ~ 4113675 (+)
LOC122331563 NA other upstream 576816 3122302 ~ 3396823 (+)
LOC122331512 NA other upstream 958370 2425141 ~ 3015269 (+)
LOC122331570 NA other upstream 1052442 2852212 ~ 2921197 (+)
G170683 NA other upstream 1160600 2631377 ~ 2813039 (+)
LOC122331475 LOC107558504,LOC107575635,LOC107711457 other upstream 1828593 2142280 ~ 2145046 (+)
G170953 NA other downstream 129672 4104474 ~ 4105130 (+)
G170961 NA other downstream 193832 4168634 ~ 4169030 (+)
proza proza,LOC107573529,LOC107732003,LOC107576663,LOC107680190,LOC108438900 other downstream 207373 4182175 ~ 4188253 (+)
G171269 mgat5b,LOC107562046,LOC107743022,LOC108274344 other downstream 1170352 5145154 ~ 5155135 (+)
LOC122331671 NA other downstream 1185671 5160473 ~ 5168105 (+)

Expression


Co-expression Network