LOC122331551


Basic Information

Item Value
gene id LOC122331551
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 3964279 ~ 3972387 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229067.1
CATAACATGTCTAGATAACACTAAGAAACAACACATGCCttcaaatatgtatttcaaatataataaaaatatgaaaatgttttttttagtttttccttctcttctccatttacacttttttttaattagaaactacagcaaaacagaaatgctattaaagaagacttttattttggtgtttggGTGTGATGTCATAAGGCTGCATCTGGCTTCTGCGTCTGTGATTCGGTTGAAGAAagATggcgtttattaaagaggagagtgacgACTGGAAGATTGAAGATGTGAAGATTGAAGACGTATTCAGAGTGAAACAAGAAGATACTGAGAAACAAAGAGaccGGATTGAGGAGAGTCAAGAACTGAAAGATACGGAAGGGAAAGAGCAGAATGAGAAatactgtgttttaaaaattggaaaaaatcCCACACAGACTAAAAAGTGCTTGTCTCAAAAAAGTGTCCAGGAGATTGAATCTGAGAGCCTTTTTACCTGCCATCactgtggaaagagtttcagtcGTAAAGGAAACCTTAAGGtccacatgagagttcacaaTGGAAAGCAACCTTatacctgccaacagtgtggaaagagtttcgcCCAAAAAGGAAGCCTTGGAGtccacatgagaattcacaaTAGAGACGTCGCTTTGTCCTGCAAACAGTGTGAGAAGTGTTTCACTAccaatgaaaaactgaaaactcacatgagagttcacactggagagaagcctttctcctgccaacagtgtggaaagagtttcgcTCTCAAAGAGAACCTTAAAATTCACACgagagttcacactggagagaaaccctacacctgccaacagtgtggaaagagttttgctCAAAAAGGAAGCCTTCGAGTTcacatgagaagtcacactggagaaaaaccttACACTTGCTCTCAGTGTGGACAGAGTTTTACACATAAAAGCAACCTTACTTcccacatgagaattcacagtGGAGAGAGGTctttcacctgccaacagtgtggaaagactTTCCCTCAAAAGCAAAACCTTGAAGTCCACATGAGGATTCActctggagagaagccttacaccTGCGCTCAGTGCAGAAAGAGCTTTACtcataaaaacacctttaaatacCACATGAAAATACACACTGGAGAGAGGCTGTTCGCATGTGATTGGTGTGGAAAGAGCTTTATAACAGAACTGAGCCGGAGATACCACATGAccattcacaccggagagaaacagTTCATGTGCTGTCAGTGTGGGAAAAGTTTTGCACATAAAGTAGGTCTAAATTACCACATGAGGACTCACTCGGGAGAGAACTGTTTCATGTGTCAACAATGTGGAAAACGTTTTAGTCATAAATGTAACCTAAAAACTCACATGAGACTTCACCCTGAAGAGAATTCCTTCACCTGCAAATCTGAGTGAACGTTGACGCTGGTCCTGACTGAGAGTCAAATCTAAAAGTAGTTTTACTACGCTTAGGGCA
>XM_043229068.1
CATAACATGTCTAGATAACACTAAGAAACAACACATGCCttcaaatatgtatttcaaatataataaaaatatgaaaatgttttttttagtttttccttctcttctccatttacacttttttttaattagaaactacagcaaaacagaaatgctattaaagaagacttttattttggtgtttggGTGTGATGTCATAAGGCTGCATCTGGCTTCTGCGTCTGTGATTCGGTTGAAGAAaggtttgtgtttaattttgtgCTAACAATGTAAAATTACTTGTAAGCCTGTAATGAGTCATTTAACGTAAGTGCTCATTATTCGTGAGAGTAAAGTGCATCAGCAACTGCACAAGAAAAGCTGCTTATTTCTTGTTTTGGGATTCAACAGACTAATCAACAATTTAATGTAacggaataaaaaaatgtcaggcTTATTTCGATTGATCTGACTTGTCAAATGATTtggttttataaaacaattttaatatagCCCAAGCTCAGTCACTGTGAAACATGCTGAGAAACAAACCTGGTCCGAGGCAGGCTAAAGATggcgtttattaaagaggagagtgacgACTGGAAGATTGAAGATGTGAAGATTGAAGACGTATTCAGAGTGAAACAAGAAGATACTGAGAAACAAAGAGaccGGATTGAGGAGAGTCAAGAACTGAAAGATACGGAAGGGAAAGAGCAGAATGAGAAatactgtgttttaaaaattggaaaaaatcCCACACAGACTAAAAAGTGCTTGTCTCAAAAAAGTGTCCAGGAGATTGAATCTGAGAGCCTTTTTACCTGCCATCactgtggaaagagtttcagtcGTAAAGGAAACCTTAAGGtccacatgagagttcacaaTGGAAAGCAACCTTatacctgccaacagtgtggaaagagtttcgcCCAAAAAGGAAGCCTTGGAGtccacatgagaattcacaaTAGAGACGTCGCTTTGTCCTGCAAACAGTGTGAGAAGTGTTTCACTAccaatgaaaaactgaaaactcacatgagagttcacactggagagaagcctttctcctgccaacagtgtggaaagagtttcgcTCTCAAAGAGAACCTTAAAATTCACACgagagttcacactggagagaaaccctacacctgccaacagtgtggaaagagttttgctCAAAAAGGAAGCCTTCGAGTTcacatgagaagtcacactggagaaaaaccttACACTTGCTCTCAGTGTGGACAGAGTTTTACACATAAAAGCAACCTTACTTcccacatgagaattcacagtGGAGAGAGGTctttcacctgccaacagtgtggaaagactTTCCCTCAAAAGCAAAACCTTGAAGTCCACATGAGGATTCActctggagagaagccttacaccTGCGCTCAGTGCAGAAAGAGCTTTACtcataaaaacacctttaaatacCACATGAAAATACACACTGGAGAGAGGCTGTTCGCATGTGATTGGTGTGGAAAGAGCTTTATAACAGAACTGAGCCGGAGATACCACATGAccattcacaccggagagaaacagTTCATGTGCTGTCAGTGTGGGAAAAGTTTTGCACATAAAGTAGGTCTAAATTACCACATGAGGACTCACTCGGGAGAGAACTGTTTCATGTGTCAACAATGTGGAAAACGTTTTAGTCATAAATGTAACCTAAAAACTCACATGAGACTTCACCCTGAAGAGAATTCCTTCACCTGCAAATCTGAGTGAACGTTGACGCTGGTCCTGACTGAGAGTCAAATCTAAAAGTAGTTTTACTACGCTTAGGGCA
>XM_043229069.1
AATTGGGTTTGTAGGTGTCAGTATATTGgatcacacttttattattcccTTTGTGTTGATTGTGTCAGTGATCACATGGATAATATATAGTAGAGCTTCATGTTCTACTGATCATCTCTCTCATGTATCAAGGAAACCAGATTATCACATTTTGGCTGTTTTCATATACACCTTGCTGCTTATGGTGCTTTATGTGGTAATAATGGCACtcaattcatttttatcttcttctttgtctttttctttattgtttctTCCTTATTTGTTGACAAGCGTGAGACTGATTTCAGATCCTCTCCTGTGTGTTCTGGTCTGCAGGCAGAATCTTAGTATTCAAACATCGCAAACGTCTGAAGGAACTGCTTTAGTTTGAGGAGGTCTGGTTAAATGGGCTATTTGGTGATATTCTATGATATTTTGACTATTAGGTTCAGTGTATTAAAGGATTAGTTAACCCCAAAATGGGGTTTCTGTCATTGAAGAAATTGCAGTCTCAAGAAGATGAGAGAAGAATCTTGGAGCAGTATGGAGACAGAGGTTTGTGAGGTTCAGAATaagtcaagtgtgtgtgtgtttgtgtgtgcattcgcatgtatgtatgaatatataaacatgtgtgtgtgtgtttattgaatGCAATTTAGCGTTAGGTGAATTCTAACACAAAGATTAAACGATTGTATGATTGAACTATTTgaactttattcaaatatagCACTGTTAATTTTATGTAGCATGATTTCATGATTTCAAGATTTCAAGTATTCCTGCACTTCTATACACgtctaatatattttatctttgcTGTTTGATCCGATATTTTCCCTCCAGCAACCACCTAGTGACTACTTATTCTGTGTTGGCACAAGCTGATCTGTATTGTTATCATATGACAATTGTCTTTTATGTACTCTTCAGGTCAGTGTATATAGCAGTTTATAGAATGCAGTTTGGAATGCTAACTAGCAAGTATTTGTTAGAAATATTCACAAATGTGTGTTGTGGCTCCCCCGAAAATATTTATCATTGCATATGACTTTGTCTCTGCCATTGAGGATGCAGAGAGGGACATCTCAAGTACTTTTATGGATATTTACGTGATCCAAAGAGATGGGGATGGGGAGCCAGAGAACGTGGGAATTGTGAGACCTGAACAATGCAGGCGTTCACCATGCTGTTTGGGCTCATTTATGCCCTTGATCTGAGCTTTCCAAAAAAACCTCAAGTGTACCTTTGGGTTTTTCCAGAAGAATTTGGATGGACACGAGCTAAATACAAAGATACAGCAGTTGAAAATCAAGTTGTTCACGTAACAGGCGCACATCAggtgaaaaaaacattgagaaaTCTCCTCCTCTTACTGCAGTCATTAAAGAACATTGCTAGATAACAcgtctttaaaaatgcatttcaaaaggaATGCAATTCTAAATACTCTTGGCATTCTGACATTGGctagaacttttattttggcgcgGCGATGTGATGTCATAAGGATGCGCCGCGGCCCTGCTTCTGTGATTCAGCTGAAGAAGATggcgtttattaaagaggagagtgaagacTGGAGGATTGAAGACGTGAAGATTCAAGAGGTTTTCAGAGTGAAACAAGAAGATACTGAGAAACAAACAGATggcgtttattaaagaggagagtgacgACTGGAAGATTGAAGATGTGAAGATTGAAGACGTATTCAGAGTGAAACAAGAAGATACTGAGAAACAAAGAGaccGGATTGAGGAGAGTCAAGAACTGAAAGATACGGAAGGGAAAGAGCAGAATGAGAAatactgtgttttaaaaattggaaaaaatcCCACACAGACTAAAAAGTGCTTGTCTCAAAAAAGTGTCCAGGAGATTGAATCTGAGAGCCTTTTTACCTGCCATCactgtggaaagagtttcagtcGTAAAGGAAACCTTAAGGtccacatgagagttcacaaTGGAAAGCAACCTTatacctgccaacagtgtggaaagagtttcgcCCAAAAAGGAAGCCTTGGAGtccacatgagaattcacaaTAGAGACGTCGCTTTGTCCTGCAAACAGTGTGAGAAGTGTTTCACTAccaatgaaaaactgaaaactcacatgagagttcacactggagagaagcctttctcctgccaacagtgtggaaagagtttcgcTCTCAAAGAGAACCTTAAAATTCACACgagagttcacactggagagaaaccctacacctgccaacagtgtggaaagagttttgctCAAAAAGGAAGCCTTCGAGTTcacatgagaagtcacactggagaaaaaccttACACTTGCTCTCAGTGTGGACAGAGTTTTACACATAAAAGCAACCTTACTTcccacatgagaattcacagtGGAGAGAGGTctttcacctgccaacagtgtggaaagactTTCCCTCAAAAGCAAAACCTTGAAGTCCACATGAGGATTCActctggagagaagccttacaccTGCGCTCAGTGCAGAAAGAGCTTTACtcataaaaacacctttaaatacCACATGAAAATACACACTGGAGAGAGGCTGTTCGCATGTGATTGGTGTGGAAAGAGCTTTATAACAGAACTGAGCCGGAGATACCACATGAccattcacaccggagagaaacagTTCATGTGCTGTCAGTGTGGGAAAAGTTTTGCACATAAAGTAGGTCTAAATTACCACATGAGGACTCACTCGGGAGAGAACTGTTTCATGTGTCAACAATGTGGAAAACGTTTTAGTCATAAATGTAACCTAAAAACTCACATGAGACTTCACCCTGAAGAGAATTCCTTCACCTGCAAATCTGAGTGAACGTTGACGCTGGTCCTGACTGAGAGTCAAATCTAAAAGTAGTTTTACTACGCTTAGGGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229067.1 False 1494 mRNA 0.40 3 3970102 3972387
XM_043229068.1 False 1804 mRNA 0.39 3 3970102 3972387
XM_043229069.1 True 2890 mRNA 0.40 4 3964279 3972387

Neighbor

gene id symbol gene type direction distance location
LOC122331511 NA coding upstream 24461 3932183 ~ 3939818 (+)
LOC122331524 NA coding upstream 76944 3883495 ~ 3887335 (+)
LOC122331553 NA coding upstream 133089 3827259 ~ 3831190 (+)
LOC122331583 NA coding upstream 163472 3792277 ~ 3800807 (+)
LOC122331576 NA coding upstream 190178 3762464 ~ 3774101 (+)
LOC122331548 NA coding downstream 115518 4087905 ~ 4091116 (+)
LOC122331590 NA coding downstream 204084 4176471 ~ 4178576 (+)
LOC122331578 NA coding downstream 206188 4178575 ~ 4179598 (+)
gprc5ba gprc5b,gprc5ba,LOC107721060,LOC107670358,LOC107574037 coding downstream 217973 4190360 ~ 4210087 (+)
LOC122331545 NA coding downstream 413783 4386170 ~ 4389274 (+)
G170934 NA non-coding upstream 33057 3930494 ~ 3931222 (+)
LOC122331627 NA non-coding upstream 35510 3928403 ~ 3928769 (+)
LOC122331631 NA non-coding upstream 236324 3724811 ~ 3727955 (+)
LOC122331633 NA non-coding upstream 322833 3640895 ~ 3641446 (+)
G170921 NA non-coding upstream 324263 3638171 ~ 3640016 (+)
G170939 NA non-coding downstream 40267 4012654 ~ 4013010 (+)
G170940 NA non-coding downstream 41056 4013443 ~ 4013756 (+)
G170944 NA non-coding downstream 70352 4042739 ~ 4043368 (+)
G170945 NA non-coding downstream 82253 4054640 ~ 4054854 (+)
G170956 NA non-coding downstream 140874 4113261 ~ 4113675 (+)
LOC122331563 NA other upstream 567456 3122302 ~ 3396823 (+)
LOC122331512 NA other upstream 949010 2425141 ~ 3015269 (+)
LOC122331570 NA other upstream 1043082 2852212 ~ 2921197 (+)
G170683 NA other upstream 1151240 2631377 ~ 2813039 (+)
LOC122331475 LOC107558504,LOC107575635,LOC107711457 other upstream 1819233 2142280 ~ 2145046 (+)
G170923 NA other downstream 1252 3973639 ~ 3974802 (+)
G170953 NA other downstream 132087 4104474 ~ 4105130 (+)
G170961 NA other downstream 196247 4168634 ~ 4169030 (+)
proza proza,LOC107573529,LOC107732003,LOC107576663,LOC107680190,LOC108438900 other downstream 209788 4182175 ~ 4188253 (+)
G171269 mgat5b,LOC107562046,LOC107743022,LOC108274344 other downstream 1172767 5145154 ~ 5155135 (+)

Expression


Co-expression Network