G170939


Basic Information

Item Value
gene id G170939
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 4012654 ~ 4013010 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU253136
tgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtcagatccCTTTTTAGGACTTGTGTTGATAAATCTTTAAATTAGTTTAGAAGGAGGAGAAGATTTTGGTCAATCCAGTCATCACTTCCTTAGTTACCGTCCCCATGGCTACAGACAACAAGCCGTGTCGCTTTCTGTCGGGATGTTTTGACCGCGGGTTAGTTATTGGTCGACGGCGACTTTGGGAAAGTCTACAGTGAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253136 True 250 lncRNA 0.46 2 4012654 4013010

Neighbor

gene id symbol gene type direction distance location
LOC122331551 NA coding upstream 40267 3964279 ~ 3972387 (+)
LOC122331511 NA coding upstream 72836 3932183 ~ 3939818 (+)
LOC122331524 NA coding upstream 125319 3883495 ~ 3887335 (+)
LOC122331553 NA coding upstream 181464 3827259 ~ 3831190 (+)
LOC122331583 NA coding upstream 211847 3792277 ~ 3800807 (+)
LOC122331548 NA coding downstream 74895 4087905 ~ 4091116 (+)
LOC122331590 NA coding downstream 163461 4176471 ~ 4178576 (+)
LOC122331578 NA coding downstream 165565 4178575 ~ 4179598 (+)
gprc5ba gprc5b,gprc5ba,LOC107721060,LOC107670358,LOC107574037 coding downstream 177350 4190360 ~ 4210087 (+)
LOC122331545 NA coding downstream 373160 4386170 ~ 4389274 (+)
G170904 NA non-coding upstream 13997 3623277 ~ 3998657 (+)
G170934 NA non-coding upstream 81432 3930494 ~ 3931222 (+)
LOC122331627 NA non-coding upstream 83885 3928403 ~ 3928769 (+)
LOC122331631 NA non-coding upstream 284699 3724811 ~ 3727955 (+)
LOC122331633 NA non-coding upstream 371208 3640895 ~ 3641446 (+)
G170940 NA non-coding downstream 433 4013443 ~ 4013756 (+)
G170944 NA non-coding downstream 29729 4042739 ~ 4043368 (+)
G170945 NA non-coding downstream 41630 4054640 ~ 4054854 (+)
G170956 NA non-coding downstream 100251 4113261 ~ 4113675 (+)
G170960 NA non-coding downstream 155093 4168103 ~ 4168413 (+)
G170923 NA other upstream 37852 3973639 ~ 3974802 (+)
LOC122331563 NA other upstream 615831 3122302 ~ 3396823 (+)
LOC122331512 NA other upstream 997385 2425141 ~ 3015269 (+)
LOC122331570 NA other upstream 1091457 2852212 ~ 2921197 (+)
G170683 NA other upstream 1199615 2631377 ~ 2813039 (+)
G170953 NA other downstream 91464 4104474 ~ 4105130 (+)
G170961 NA other downstream 155624 4168634 ~ 4169030 (+)
proza proza,LOC107573529,LOC107732003,LOC107576663,LOC107680190,LOC108438900 other downstream 169165 4182175 ~ 4188253 (+)
G171269 mgat5b,LOC107562046,LOC107743022,LOC108274344 other downstream 1132144 5145154 ~ 5155135 (+)
LOC122331671 NA other downstream 1147463 5160473 ~ 5168105 (+)

Expression


Co-expression Network