G170960



Basic Information


Item Value
gene id G170960
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information


Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 4168103 ~ 4168413 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence


>TU253161
GGCTCACAGAGAACATGGCCACAATTAGATACAACTTTtataaaactgaagaaaatcattaaAGAGACAAACGCTTCTCACCTGTCTGTTGATGAAGAAATCTGAAATTACCTTGTgcttttaagtgtatttttcttTAGGTCTCATTCACAGTAGCAATTAATAGGCTATATCTTCGGGACCGGGCAAagccaaaacaacaaacaaaacatatcaCTAACTACAACCGCATTTCCACCATTGAACTGAACGGTTCGCTTTGAGTTATGGTTTAGTTATCAGATGTTTACATATGATGTGaggtaataata

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU253161 True 311 lncRNA 0.36 1 4168103 4168413

Neighbor


gene id symbol gene type direction distance location
LOC122331548 NA coding upstream 76987 4087905 ~ 4091116 (+)
LOC122331551 NA coding upstream 195716 3964279 ~ 3972387 (+)
LOC122331511 NA coding upstream 228285 3932183 ~ 3939818 (+)
LOC122331524 NA coding upstream 280768 3883495 ~ 3887335 (+)
LOC122331553 NA coding upstream 336913 3827259 ~ 3831190 (+)
LOC122331590 NA coding downstream 8058 4176471 ~ 4178576 (+)
LOC122331578 NA coding downstream 10162 4178575 ~ 4179598 (+)
gprc5ba gprc5b,gprc5ba,LOC107721060,LOC107670358,LOC107574037 coding downstream 21947 4190360 ~ 4210087 (+)
LOC122331545 NA coding downstream 217757 4386170 ~ 4389274 (+)
LOC122331661 NA coding downstream 231503 4399916 ~ 4401653 (+)
G170956 NA non-coding upstream 54428 4113261 ~ 4113675 (+)
G170945 NA non-coding upstream 113249 4054640 ~ 4054854 (+)
G170944 NA non-coding upstream 124735 4042739 ~ 4043368 (+)
G170940 NA non-coding upstream 154347 4013443 ~ 4013756 (+)
G170939 NA non-coding upstream 155093 4012654 ~ 4013010 (+)
G171067 NA non-coding downstream 277299 4445712 ~ 4445989 (+)
G171068 NA non-coding downstream 278618 4447031 ~ 4447951 (+)
G171079 NA non-coding downstream 351840 4520253 ~ 4520479 (+)
G171072 NA non-coding downstream 365515 4533928 ~ 4577098 (+)
G171075 NA non-coding downstream 412378 4580791 ~ 4595573 (+)
G170953 NA other upstream 62973 4104474 ~ 4105130 (+)
G170923 NA other upstream 193301 3973639 ~ 3974802 (+)
LOC122331563 NA other upstream 771280 3122302 ~ 3396823 (+)
LOC122331570 NA other upstream 1246906 2852212 ~ 2921197 (+)
G170683 NA other upstream 1355064 2631377 ~ 2813039 (+)
G170961 NA other downstream 221 4168634 ~ 4169030 (+)
proza proza,LOC107573529,LOC107732003,LOC107576663,LOC107680190,LOC108438900 other downstream 13762 4182175 ~ 4188253 (+)
G171269 mgat5b,LOC107562046,LOC107743022,LOC108274344 other downstream 976741 5145154 ~ 5155135 (+)
LOC122331671 NA other downstream 992060 5160473 ~ 5168105 (+)

Expression



Co-expression Network