G171079


Basic Information

Item Value
gene id G171079
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 4520253 ~ 4520479 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU253341
TTGCCATTGTATGCTATCGCAAAAAAGCATATATGCAACAATccttaatgcattatataactCTTACTGAACTGATACCGACTTGTCTTAATCTTTTTCGCGATGCATCGTAGAAACAATTAATTTCAACACCTCTACTGTAAACTTAAAAGGAACTCTTTGAACTGTCACAATTTTGATCAAGGTTAAATACCATAGATAGTGcaattattgttattcttttcCTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU253341 True 227 lncRNA 0.32 1 4520253 4520479

Neighbor

gene id symbol gene type direction distance location
LOC122331510 NA coding upstream 40720 4466079 ~ 4479533 (+)
LOC122331662 NA coding upstream 55822 4461252 ~ 4464431 (+)
si:ch211-165i18.2 NA coding upstream 60524 4457512 ~ 4459729 (+)
LOC122331661 NA coding upstream 118600 4399916 ~ 4401653 (+)
LOC122331545 NA coding upstream 130979 4386170 ~ 4389274 (+)
LOC122331521 LOC107573535,LOC107571679,LOC107710299,LOC107574960 coding downstream 232912 4753391 ~ 4765488 (+)
LOC122331589 NA coding downstream 254904 4775383 ~ 4777184 (+)
LOC122331666 NA coding downstream 260700 4781179 ~ 4782213 (+)
LOC122331582 LOC107571813,LOC107661922,LOC107758411,LOC107758408 coding downstream 283379 4803858 ~ 4805435 (+)
LOC122331584 LOC107661924,LOC107571811,LOC107758410,LOC107571812 coding downstream 287372 4807851 ~ 4811924 (+)
G171068 NA non-coding upstream 72302 4447031 ~ 4447951 (+)
G171067 NA non-coding upstream 74264 4445712 ~ 4445989 (+)
G170960 NA non-coding upstream 351840 4168103 ~ 4168413 (+)
G170956 NA non-coding upstream 406578 4113261 ~ 4113675 (+)
G170945 NA non-coding upstream 465399 4054640 ~ 4054854 (+)
G171072 NA non-coding downstream 13449 4533928 ~ 4577098 (+)
G171075 NA non-coding downstream 60312 4580791 ~ 4595573 (+)
G171073 NA non-coding downstream 78270 4598749 ~ 4606693 (+)
G171087 NA non-coding downstream 90673 4611152 ~ 4611414 (+)
G171092 NA non-coding downstream 95347 4615826 ~ 4616247 (+)
proza proza,LOC107573529,LOC107732003,LOC107576663,LOC107680190,LOC108438900 other upstream 332000 4182175 ~ 4188253 (+)
G170961 NA other upstream 351223 4168634 ~ 4169030 (+)
G170953 NA other upstream 415123 4104474 ~ 4105130 (+)
G170923 NA other upstream 545451 3973639 ~ 3974802 (+)
LOC122331563 NA other upstream 1123430 3122302 ~ 3396823 (+)
G171269 mgat5b,LOC107562046,LOC107743022,LOC108274344 other downstream 624675 5145154 ~ 5155135 (+)
LOC122331671 NA other downstream 639994 5160473 ~ 5168105 (+)

Expression


Co-expression Network