LOC122331662


Basic Information

Item Value
gene id LOC122331662
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 4461252 ~ 4464431 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043229167.1
atgtataggttgaaaaATGGAGGACTCACTGAGAACGAGATCAGCTCCGAGGACAGAAGACCGAATCCACCTCAAACAGACCCTCGGAGAGTTGAAGCTTCAGCAAACGGCCAACAATACTGTCCTGTGAGCTTCCCTGACATCCACGCAGCGCTGAGAGAGCTGACCGCCACCGTTACAGAGCAGAAAGACAGCATCAGAGCCTTAGAGACACGACTGAAGGAACAACAGACGTTCATCCTGGAAGAGCTGAACAAGAAAAATGATGAAATGTCTAATCTTACTGAGAGTCAAGTGGAGGAGCTGAGAAAGGAGAATAGAGacagagagatagcaTTTTCAGCTGCACTGATGGACTCTGGCGGTGGACACATTGGTCCTTTTACCACTGATATCACCCTAACCTACAGGAAAGTCTTCACAAACATAGGGGAGGCCTACAACCCAATTACAGGTGTTTTCACAGCCCCACTGAAAGGAGCGTACATGTTCATCTTCTCTGTCTTTGGTCACAGTAATCCCTCAAATCCATCAGCTGCCTCTATTATGAAGAATGGAGAGAAGGTGGTTATGGCACATGGTTATCAGGATCAGTATGATGTAAACTCCTCGAAAGGAGTGGTGTTGATCCTGGAGGTGGGAGATGTTGTCTATGTGAGACTTTGGTCTGAAAAGTGGATATATGATGACGAGAATAACCACAACACTTTTAGTGGTTACCTACTGTTTCCCTTAAGAGAACAGGAGCTTTGCAGAAAGTGATTCCAGTAAAACTGACTCTTAATAGTATGATTTAGGATGTAAAACATGAGGAATCATTAACATATGAATCTGTGTTAATGCTGGTCGACTGTATGAGAGTCAGTATAACAGACGGTACTCCTAGGTTCGGAGTTGTATACAATCAGTTTCAGACTCAAGACAGACGGGACCCTCATGAGAAAATCtagatttaataatttgtatttgttacTAATCGCTGACCTGTGTCTTTTCATCCTACATTAATAAGAGAATCAAGAGACCTTATTgctccattttctttttctcatgtTCTCAAATATTTTCACTTGTAGGCTATGTAACAGACCAAAGAATTATTACGGAGGCAACTGACGTTAATGAAAGAATATCATTATCAGCTATCATCGCAAACTACAATTCCCGTTCATCAATAAAGTGAGAACCAGAgccattttaaaactaaatatacttgattgaaacaaataaattaaagtataGAGTAGTAATAATTGCTATTATCGCTAAGTAAAGTTTTAGTCTGTCAACTGCTACCCTACATAAACCCTACAAGCTTTGAAGTTCAGCTATTACAACTTGACTGTCTCAACCTATTGTTTTAGCTCTGATACATCCACCACCTCATCTGATGAAGGGTCATATTGAAAAttgtcagaaaaaaagagattcaATCACTTCAGTATCAATTATAGGCAAACCAAGAGTCAGTAGTCCCATCTTGTTCAGAATGTCTCTTCCTGCTATCCCTCATAAAAGTGCCTCTGATATAAGACAAGTCAGAGTTTATTCTTCACGATTCTGCGAGGCCCTTACTGAACGCTACAATGAAATCAGTTCCTCTGTATGCCTTGAGTCTGTAGCATCTGATCTAAATGTCGAACAACCTTTGGAATCTTTAAACACGGTATGGTTGGAGATATTAAATGATATTGCAGCTTACAGGTTTCTGAAACCAAAGCGTAAGTCAAAGCCTTGGCTTGATCAAGATATTCGCTCACTGAGGCAATCATGTAGGTATACACGGTTGATATATAAGAACTGTTTATCTTTATACCAGAGAGCTGTTAAGAAAGCCAAGTGTCTCTATTTCTCCAATCTGATGGAGAAACATCACCAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043229167.1 True 1879 mRNA 0.40 5 4461252 4464431

Neighbor

gene id symbol gene type direction distance location
si:ch211-165i18.2 NA coding upstream 1523 4457512 ~ 4459729 (+)
LOC122331661 NA coding upstream 59599 4399916 ~ 4401653 (+)
LOC122331545 NA coding upstream 71978 4386170 ~ 4389274 (+)
gprc5ba gprc5b,gprc5ba,LOC107721060,LOC107670358,LOC107574037 coding upstream 251165 4190360 ~ 4210087 (+)
LOC122331578 NA coding upstream 281654 4178575 ~ 4179598 (+)
LOC122331510 NA coding downstream 1648 4466079 ~ 4479533 (+)
LOC122331521 LOC107573535,LOC107571679,LOC107710299,LOC107574960 coding downstream 288960 4753391 ~ 4765488 (+)
LOC122331589 NA coding downstream 310952 4775383 ~ 4777184 (+)
LOC122331666 NA coding downstream 316748 4781179 ~ 4782213 (+)
LOC122331582 LOC107571813,LOC107661922,LOC107758411,LOC107758408 coding downstream 339427 4803858 ~ 4805435 (+)
G171068 NA non-coding upstream 13301 4447031 ~ 4447951 (+)
G171067 NA non-coding upstream 15263 4445712 ~ 4445989 (+)
G170960 NA non-coding upstream 292839 4168103 ~ 4168413 (+)
G170956 NA non-coding upstream 347577 4113261 ~ 4113675 (+)
G170945 NA non-coding upstream 406398 4054640 ~ 4054854 (+)
G171079 NA non-coding downstream 55822 4520253 ~ 4520479 (+)
G171072 NA non-coding downstream 69497 4533928 ~ 4577098 (+)
G171075 NA non-coding downstream 116360 4580791 ~ 4595573 (+)
G171073 NA non-coding downstream 134318 4598749 ~ 4606693 (+)
G171087 NA non-coding downstream 146721 4611152 ~ 4611414 (+)
proza proza,LOC107573529,LOC107732003,LOC107576663,LOC107680190,LOC108438900 other upstream 272999 4182175 ~ 4188253 (+)
G170961 NA other upstream 292222 4168634 ~ 4169030 (+)
G170953 NA other upstream 356122 4104474 ~ 4105130 (+)
G170923 NA other upstream 486450 3973639 ~ 3974802 (+)
LOC122331563 NA other upstream 1064429 3122302 ~ 3396823 (+)
G171269 mgat5b,LOC107562046,LOC107743022,LOC108274344 other downstream 680723 5145154 ~ 5155135 (+)
LOC122331671 NA other downstream 696042 5160473 ~ 5168105 (+)

Expression


Co-expression Network