proza (proza,LOC107573529,LOC107732003,LOC107576663,LOC107680190,LOC108438900)
Chromosome Information
| Item |
Value |
| chromosome id |
NW_025047681.1 |
| NCBI id |
JAEQBD010000026.1
|
| chromosome length |
5200000 |
| location |
4182175 ~ 4188253 (+) |
| genome version |
ASM1883169v1_2021_tiger_barb_Genome |
Sequence
>TU253145
GAAGAAAGCGTTAAAAGACCGTTTCGGCTCAGGACCTGAGGGAAAGCACCCTCgtgtggacacacacacacacacacacacagcactagATGTGGTGATATGTCGGTGTGACGGACTGTTGTCGGTCGGTGTGACCCGGGACCGGGGGAGAGCTCCTTCACGTCCGCGTCGCGAGCGCCGAGTCTCCGTTACGTAATCATACTCTACAAGAGATAAACAACACCCGCCGTGTTTTAATCTGAAACACATTCTGACTGGAAACGGCTCGTCGGGACAGCGGAGGCTTTCACGGCCGCATCCGTTAAATGAGGTTAAACGCCCGTGTTTTTCCCAGGCGTCGATAAACACGAGCATGGCTCGCCTCGGAGGACTGCTGTCTCTCGTCGTGTTGTTGGGCTGCGTGACCGCCGAGCCGCGCGGGAAAACAGCTCCTGTGTTCCTGGAAAAGTGGGATGCACTTAGTTTAATTTCCCGTCAGAAGAGAAGCAACGCGGGAGATGAAGAGACCAAACTCCCGGCCAGCCTCGAGAGGGAGTGTTTAGAGGAAGTTTGTGATTACGAAGAAGCAAGAGAAGTCTTCCAGGATAATTATCGCACCgaTATCTTCTGGTCTGTCTACGTTGATGGTGACCAGTGTGCTGAGCAGCCATGCAAAAATGGAGCCATGTGTTCAGATAGTGTCGGGGGCATT
>TU253147
GAAGAAAGCGTTAAAAGACCGTTTCGGCTCAGGACCTGAGGGAAAGCACCCTCgtgtggacacacacacacacacacacacagcactagATGTGGTGATATGTCGGTGTGACCCGGGACCGGGGGAGAGCTCCTTCACGTCCGCGTCGCGAGCGCCGAGTCTCCGTTACGTAATCATACTCTACAAGAGATAAACAACACCCGCCGTGTTTTAATCTGAAACACATTCTGACTGGAAACGGCTCGTCGGGACAGCGGAGGCTTTCACGGCCGCATCCGTTAAATGAGGTTAAACGCCCGTGTTTTTCCCAGGCGTCGATAAACACGAGCATGGCTCGCCTCGGAGGACTGCTGTCTCTCGTCGTGTTGTTGGGCTGCGTGACCGCCGAGCCGCGCGGGAAAACAGCTCCTGTGTTCCTGGAAAAGTGGGATGCACTTAGTTTAATTTCCCGTCAGAAGAGAAGCAACGCGGGAGATGAAGAGACCAAACTCCCGGCCAGCCTCGAGAGGGAGTGTTTAGAGGAAGTTTGTGATTACGAAGAAGCAAGAGAAGTCTTCCAGGATAATTATCGCACCgaTATCTTCTGGTCTGTCTACGTTGATGGTGACCAGTGTGCTGAGCAGCCATGCAAAAATGGAGCCATGTGTTCAGATAGTGTCGGGGGCATT
>XM_043229151.1
cagcactagATGTGGTGATATGTCGGTGTGACGGACTGTTGTCGGTCGGTGTGACCCGGGACCGGGGGAGAGCTCCTTCACGTCCGCGTCGCGAGCGCCGAGTCTCCGTTACGTAATCATACTCTACAAGAGATAAACAACACCCGCCGTGTTTTAATCTGAAACACATTCTGACTGGAAACGGCTCGTCGGGACAGCGGAGGCTTTCACGGCCGCATCCGTTAAATGAGGTTAAACGCCCGTGTTTTTCCCAGGCGTCGATAAACACGAGCATGGCTCGCCTCGGAGGACTGCTGTCTCTCGTCGTGTTGTTGGGCTGCGTGACCGCCGAGCCGCGCGGGAAAACAGCTCCTGTGTTCCTGGAAAAGTGGGATGCACTTAGTTTAATTTCCCGTCAGAAGAGAAGCAACGCGGGAGATGAAGAGACCAAACTCCCGGCCAGCCTCGAGAGGGAGTGTTTAGAGGAAGTTTGTGATTACGAAGAAGCAAGAGAAGTCTTCCAGGATAATTATCGCACCgaTATCTTCTGGTCTGTCTACGTTGATGGTGACCAGTGTGCTGAGCAGCCATGCAAAAATGGAGCCATGTGTTCAGATAGTGTCGGGGGCATTTATCAACCTGATGCTAAATGATGTGTCTGTTGTTATCTCTATATTTCGTCACATCTAGATCAAACGGTATGTGTAGTCGATAAGAGCAAAGGGTGCAGTCAGTTCTGTAAGCCGGGCTATCAGTCGTACGAGTGCTCGTGTGCGTACGGCTGGAAACTGCAGCAGAGAGAGAAGTGCGTGCCGGCTGTGACATTTCCTTGTGGAAAAGTGACAAGTTTGAGTCAGTGGGACAAACGTCAGTCAAGCAACATACAGTCAGAATATCAAGGGCTCACCTGCGGCCAAGAAGAGTGCCCCTGGCAGGCGATACTGCGACAGGGATCGGTTGGTTTCTGCAGCGGGGTGATCTTCAGAGACAACATGGTTCTCACCACGGCCCAGTGCGCCAGGAGGCACGACAGCTTTCAGGTGGTGGCGGGTAAAAGGGTGACCTCACTGGAAACAGGAGAGCAGGTGCGTCAGGTGAAGCAGGTGCACATCCACCCGCTGTATGATGAGGGCAGACCTGACAACGACCTGGCTGTAGTGGAGCTGAGGCAGAAGCTGGTCTTCAAGGAGAAAGTGCTTCCGGCCTGTCTGCCCGAGAGAGACTTCGCTGACAGCGTGCTCATGTCGGGCGACTACATGGGTGTCGTCACCGGCTGGAAGGAGGCAGCGGTTCTGGAGGGGAGCCTCGTGTTAAACCACCTGTCCTACGACAAGCTGGAGGTCTGCTCGCAGCGCCACTCTGGTCAGGTCACCAACAAAATGGCGTGTACTGTGCCTCGGGCCAAGGCAGACTGCATGCTGGGACAGGGCAGCCCGGTGCTCACGCTGTACAGAGAGGTGTTCTTCCTCACCGGGATAGTCAGCCAGCCTCCGGAGAGCGACTGCAAGAACGGCTACGTCTTACAGAAAGTGTCCCGCTACCTGCCCTGGTTAAACACCTTCATGAGCTGAACGCACGAACGTGCAAAAccttagttattattatttaagttcCTGAGATTTATTGTCAGTCATGTTTTTTGTGTCCCAAACCACTCCttaattacttatatatatgacacttatatatatgtattactaATTGATTACGAGTATTGCAGACGgcatgaataaaaactaaacccaTTTAGAGCTAGCTTTCTGTAGACATTTTTAAGCTTGACTTTGGAAATGATTGCAGCAACAAAAACTTAACGTCTTGAGTAACCTTGACTATGCATTTTCtcatatactgtattatataatgGTGTGGATATTAGACAAGTGACACCtggacataaataaaaacagtattaaataaGA
Function
| symbol |
description |
|
proza
|
Predicted to enable calcium ion binding activity and serine-type endopeptidase activity. Predicted to act upstream of or within blood coagulation and proteolysis. Predicted to be located in extracellular region. Predicted to be active in extracellular space. Human ortholog(s) of this gene implicated in Behcet's disease and brain ischemia. Orthologous to human PROZ (protein Z, vitamin K dependent plasma glycoprotein).
|
NR:
| description |
| PREDICTED: venom prothrombin activator vestarin-D1-like |
GO:
| id |
name |
namespace |
|
GO:0007596
|
blood coagulation |
biological_process |
|
GO:0006508
|
proteolysis |
biological_process |
|
GO:0005576
|
extracellular region |
cellular_component |
|
GO:0005509
|
calcium ion binding |
molecular_function |
|
GO:0004252
|
serine-type endopeptidase activity |
molecular_function |
KEGG: NA
RNA
| RNA id |
representative |
length |
rna type |
GC content |
exon number |
start site |
end site |
| TU253145 |
False |
691 |
TUCP |
0.54 |
4 |
4182175 |
4185404 |
| TU253147 |
False |
668 |
TUCP |
0.53 |
5 |
4182175 |
4185404 |
| XM_043229151.1 |
True |
1901 |
mRNA |
0.50 |
9 |
4182255 |
4188253 |
Neighbor
| gene id |
symbol |
gene type |
direction |
distance |
location |
| LOC122331578 |
NA
|
coding |
upstream |
2577 |
4178575 ~ 4179598 (+) |
| LOC122331590 |
NA
|
coding |
upstream |
3599 |
4176471 ~ 4178576 (+) |
| LOC122331548 |
NA
|
coding |
upstream |
91059 |
4087905 ~ 4091116 (+) |
| LOC122331551 |
NA
|
coding |
upstream |
209788 |
3964279 ~ 3972387 (+) |
| LOC122331511 |
NA
|
coding |
upstream |
242357 |
3932183 ~ 3939818 (+) |
| gprc5ba |
gprc5b,gprc5ba,LOC107721060,LOC107670358,LOC107574037
|
coding |
downstream |
2107 |
4190360 ~ 4210087 (+) |
| LOC122331545 |
NA
|
coding |
downstream |
197917 |
4386170 ~ 4389274 (+) |
| LOC122331661 |
NA
|
coding |
downstream |
211663 |
4399916 ~ 4401653 (+) |
| si:ch211-165i18.2 |
NA
|
coding |
downstream |
269259 |
4457512 ~ 4459729 (+) |
| LOC122331662 |
NA
|
coding |
downstream |
272999 |
4461252 ~ 4464431 (+) |
| G170960 |
NA
|
non-coding |
upstream |
13762 |
4168103 ~ 4168413 (+) |
| G170956 |
NA
|
non-coding |
upstream |
68500 |
4113261 ~ 4113675 (+) |
| G170945 |
NA
|
non-coding |
upstream |
127321 |
4054640 ~ 4054854 (+) |
| G170944 |
NA
|
non-coding |
upstream |
138807 |
4042739 ~ 4043368 (+) |
| G170940 |
NA
|
non-coding |
upstream |
168419 |
4013443 ~ 4013756 (+) |
| G171067 |
NA
|
non-coding |
downstream |
257459 |
4445712 ~ 4445989 (+) |
| G171068 |
NA
|
non-coding |
downstream |
258778 |
4447031 ~ 4447951 (+) |
| G171079 |
NA
|
non-coding |
downstream |
332000 |
4520253 ~ 4520479 (+) |
| G171072 |
NA
|
non-coding |
downstream |
345675 |
4533928 ~ 4577098 (+) |
| G171075 |
NA
|
non-coding |
downstream |
392538 |
4580791 ~ 4595573 (+) |
| G170961 |
NA
|
other |
upstream |
13145 |
4168634 ~ 4169030 (+) |
| G170953 |
NA
|
other |
upstream |
77045 |
4104474 ~ 4105130 (+) |
| G170923 |
NA
|
other |
upstream |
207373 |
3973639 ~ 3974802 (+) |
| LOC122331563 |
NA
|
other |
upstream |
785352 |
3122302 ~ 3396823 (+) |
| LOC122331570 |
NA
|
other |
upstream |
1260978 |
2852212 ~ 2921197 (+) |
| G171269 |
mgat5b,LOC107562046,LOC107743022,LOC108274344
|
other |
downstream |
956901 |
5145154 ~ 5155135 (+) |
| LOC122331671 |
NA
|
other |
downstream |
972220 |
5160473 ~ 5168105 (+) |
Expression