LOC122331480


Basic Information

Item Value
gene id LOC122331480
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 2385443 ~ 2397688 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043228922.1
atggctaCCACCCCTGTTCTCTCGgccaagatggccaccttcccagagccactgcacaagatggctaCCACCCCTGTTCTCTCGGCCAAGATGGACACCTTCCCAgagccactgcacaagatggccgccttcccagagccactGCACAAAATGGCTACCACACCTGCAACTGCAGTAGAACCTCCGGCATGGGTTTTAGTCATGACAAAAATCCCTCTGCCTGCCCAGTCTCGGCCACGGAAACTGAAGGAGTTGGCAGCCATGCAGTCAATAAAAGGCACAACTActggtaatgatttatttagagaggtaaatgcatgtttgaacattttaggtttgaaatggGACAAGCTTGCAGGTGTGACAACAGATGGTTGTCCAAATCTGACAGGGAAAAATGTTGGACTTTTAAAGAGAATGCAGGATAAAGTCACGGAAATTAACCCTGTTcagaaattgacatttttgcattgtatcaTACATCAGGAAGTGTTATGTAAGACagtgttaaaaattaaacatgtaattGATGCTGTCACGAAGGCAATTAATTTCATCAGAGCAAGGGCTTTAAATCACAGACAATTTGTTGCATTGTTGGAGGAAAATGAGACTGAACATGGCGACATAAGCTATCACTGTACTGTTAGGTGGCTCAGCCTTGGCAAGGTATTGAAAAGTGTCTGGGATCTGAAAGACCAGATTCAGGACTTCTGTGTTAAGAAAGGCCATGACGTTCCAGAACTTTCAGATAAAGACTGGGTGGCAGACCTCCGATTCACTGTGGATATGACTGCACTAATGAACGAACTAAATATCAAACTGCAGTGCAAAGGCCTTTTTGTGCATGAGATGTACAATGCAGTGAAGGCTTTTATAAGAAAACGGCAACTTCTCTCAAGCCAAGTGAAAGACAACATTCTGACTCACTTGCCAACACTTAAAGAAGCCAAAAGACCAGGTGATCACCTCCAAAATGTGGATGATGCACCAAGTGAAGTTCAGATGGAACTCATTGATCTGCAGTCTGACTCACTTCTGGCAGATCACTTTAGGCTGCAGAGGAGCAAGGTGAAGCCGGGGGgatggaggagcctgacagagctggaGGGATGGAAGGATGAGGTGAAgttggaggagtggaatcccgAGGcaacggatggtcgacgacagaccaaggtggagccggagggatga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043228922.1 True 1197 mRNA 0.46 6 2385443 2397688

Neighbor

gene id symbol gene type direction distance location
LOC122331586 NA coding upstream 55619 2321133 ~ 2329824 (+)
LOC122331539 NA coding upstream 114307 2261325 ~ 2271136 (+)
LOC122331483 LOC107690531 coding upstream 207162 2173493 ~ 2178281 (+)
LOC122331712 NA coding upstream 277454 2105853 ~ 2107989 (+)
LOC122331711 NA coding upstream 281144 2095095 ~ 2104299 (+)
LOC122331535 NA coding downstream 261205 2658893 ~ 2662205 (+)
LOC122331530 NA coding downstream 391557 2789245 ~ 2794782 (+)
LOC122331481 NA coding downstream 672608 3070296 ~ 3072270 (+)
LOC122331579 NA coding downstream 864004 3261692 ~ 3267918 (+)
LOC122331519 NA coding downstream 1169051 3566739 ~ 3571853 (+)
G170673 NA non-coding upstream 129373 2255712 ~ 2256070 (+)
G170663 NA non-coding upstream 149529 2235619 ~ 2235914 (+)
G170662 NA non-coding upstream 153088 2232147 ~ 2232355 (+)
G170657 NA non-coding upstream 164682 2220471 ~ 2220761 (+)
G170639 NA non-coding upstream 201816 2183403 ~ 2183627 (+)
LOC122331608 NA non-coding downstream 98988 2496676 ~ 2498006 (+)
LOC122331626 NA non-coding downstream 150613 2548301 ~ 2553060 (+)
G170668 NA non-coding downstream 422334 2820022 ~ 3020921 (+)
G170723 NA non-coding downstream 423887 2821575 ~ 2822666 (+)
G170725 NA non-coding downstream 458295 2855983 ~ 2885292 (+)
LOC122331475 LOC107558504,LOC107575635,LOC107711457 other upstream 240397 2142280 ~ 2145046 (+)
LOC122331715 LOC107553789,LOC101886404,LOC107574780 other upstream 298267 2077735 ~ 2087176 (+)
LOC122331469 NA other upstream 356279 2023510 ~ 2029164 (+)
LOC122331718 NA other upstream 677083 1704578 ~ 1708360 (+)
G170438 NA other upstream 875386 1464065 ~ 1510057 (+)
LOC122331512 NA other downstream 27453 2425141 ~ 3015269 (+)
G170683 NA other downstream 233689 2631377 ~ 2813039 (+)
LOC122331570 NA other downstream 454524 2852212 ~ 2921197 (+)
LOC122331563 NA other downstream 724614 3122302 ~ 3396823 (+)
G170923 NA other downstream 1575951 3973639 ~ 3974802 (+)

Expression


Co-expression Network