LOC122331505


Basic Information

Item Value
gene id LOC122331505
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025047681.1
NCBI id JAEQBD010000026.1
chromosome length 5200000
location 454502 ~ 455421 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XR_006248193.1
tttctttgtatacaAAAAGTGTTGTCGCTTGTCACTTTATAACattctttcatacttttctgtaccttgacagtgttcattacttgccAGTCAATAGATCAGCCACAAGCCCCTCCCAGTTcttttctaaaatatcttaaattgtgttccgagcataaataaagctttcacgggtttggaatgacatataattaataagaaaaaaaaaaatcattttcaggtaaagtatccctttaaatcaatagagaatttgtaataaaaattattgtcttgttttcagaaaaaaaaaaaaacaaatatggcGTGCAAGCAAATTAATCAGGTTTTCTGTGTGTtggttttagatattttaactgaaaacaagccaAAGCATCAAATTAAGCAACAGAAGGAGCAGACatcacaaatattttatgtcaaatatttattcacatggtatatgtgtgtacatgtgcctgatagattttgatattttaacataattatgTACGCGATTATGTGGCTCACAAGATGCATGAATGTTAGAACTTGCTCAAGAGATCACCTTGCGATTGGCTGAATGTTCTAAGTCATAGAACATGGTCGGAAATATTGGCGATAGGTCAAAAAAGTCCTGGAGAGAGGTTACTAACAGTTGCTTTATTATGTAGTTCATTATGGTTCCAGTTGTGTTTGTTCGTTATTCACGCatcaatagtaaaaaaaaaatggtgtgatGAACACCTCTGTTCATCAGTTTGCATTGGCTACCAATAAAATTCAAGGCATTGATGTTTGCCTACAAAACCA

Function

GO:

id name namespace
GO:0006950 response to stress biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XR_006248193.1 True 789 lncRNA 0.33 2 454502 455421

Neighbor

gene id symbol gene type direction distance location
LOC122331679 NA coding upstream 184504 268643 ~ 269998 (+)
LOC122331441 NA coding upstream 185840 267169 ~ 268662 (+)
LOC122331680 NA coding upstream 195979 254047 ~ 258523 (+)
LOC122331682 NA coding upstream 202057 250348 ~ 252445 (+)
LOC122331674 LOC107720835 coding upstream 213975 214391 ~ 240527 (+)
LOC122331495 LOC107741121,LOC107692853,LOC107574023 coding downstream 247193 702614 ~ 703989 (+)
LOC122331454 LOC107747346,LOC107559514 coding downstream 297614 753035 ~ 765747 (+)
LOC122331500 LOC107559517,LOC107717910 coding downstream 556889 1012310 ~ 1013908 (+)
LOC122331707 LOC107747346,LOC107729629,LOC107559521 coding downstream 629567 1084988 ~ 1092383 (+)
LOC122331492 LOC107747346,LOC107729629,LOC107559521 coding downstream 643400 1098821 ~ 1104124 (+)
G170307 NA non-coding upstream 24060 429029 ~ 430442 (+)
G170306 LOC107747346,LOC107729629,LOC107559521 non-coding upstream 37330 413848 ~ 417172 (+)
LOC122331685 NA non-coding upstream 176096 276735 ~ 278406 (+)
LOC122331684 NA non-coding upstream 187371 265461 ~ 267131 (+)
LOC122331688 NA non-coding upstream 221822 232167 ~ 232680 (+)
G170339 NA non-coding downstream 403835 859256 ~ 873811 (+)
LOC122331487 NA non-coding downstream 671419 1126840 ~ 1130273 (+)
G170410 NA non-coding downstream 692438 1147859 ~ 1148205 (+)
G170415 NA non-coding downstream 719327 1174748 ~ 1175018 (+)
G170417 NA non-coding downstream 757260 1212681 ~ 1212913 (+)
LOC122331683 NA other upstream 377365 75300 ~ 77137 (+)
LOC122331690 LOC107575684,LOC107720835 other upstream 392826 41422 ~ 61676 (+)
LOC122331504 LOC107747346,LOC107729629,LOC107559521 other downstream 337216 792637 ~ 799271 (+)
LOC122331460 LOC107559515,LOC107747346,LOC107559514 other downstream 593671 1049092 ~ 1059050 (+)
G170357 NA other downstream 649656 1105077 ~ 1105891 (+)
G170431 NA other downstream 896255 1351676 ~ 1352642 (+)
LOC122331738 NA other downstream 1008216 1463637 ~ 1485385 (+)

Expression


Co-expression Network