G181359


Basic Information

Item Value
gene id G181359
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048028.1
NCBI id JAEQBD010000373.1
chromosome length 1110666
location 554490 ~ 555624 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU269106
caacaaaacaaatcagtcaGAGGCAGAAAATGATCCCGGGAGCTCAGATTTCAGCAGGAGTCAGCGCCGCGTTTGGTCGGGAATATCCCAGCGATCCAAACACAAGGCCTTTCATTTCACGACCAGAACAAACCACTCGAACCGAGACCAGAAGAAGCGGCTCAACGTCCCTATAAACTCACAAAGAGAAACACCAGACCGGCCGTACGAGACGTGGGTGACCGTGAGGGTCGGGGATCTAGGAATAAATCGCAGTATCTACAAAAAGAAGATTTGGGAATCAACAGGCATACCTTGTGATGGTTCCTCGATGGAGTGGAAGAATATATCCAATGAGAGAAACGTATGATTGAAACTCCGGAGGGAAAAAATACTAAGAGGCCAAAAGCAAGGTACACAGTCTCACTGTCACTGAGAGGGTGAAGCTACAATCTCTGTTTGGGAAACGCTCGGGCGCTGTAAACGGGACATTACTTCGACTTTGGGGATCCGACTAggatgatttaaaaacattagcGGCAATGCTCGCGAACACTTGGTCCGAGCTGGACGTCCGGGATGACCAGCAGAAATGAGTCTCGACGCAAACCTGGGAAAGGCAACGCTGGAGACGGCTGGGAAAGGGTTTGATGGACAGACTCAGCTGGGAGACGCAGGGGTGGGAGGAGGTGTCAGAGACAATTAGAGACTGGGCCGCCCGAGGCCAGCGGACATCGCGAGCAGAGCACCGAATCTGTAGAGGACTGGATTATCATCGATTTCACACCAAAGGTCTCGCTTCGTCAGAGGACGCGTTCATTAAATCGGCCGAAACCGTTTAGGCGGATTCGACTGGAATGGATCCAGTGCGATTTTAGATAGTAGCGAATAAACAGTACGATatgatttacatatttgttcACGTTGCGTGCATTTCAGACACTTCAGCACACGCAGTCGCGGTTAATAAATCAAAGCATGCAAAAACTGTTGTGTGGCAAAGtcagttaaattattaa

Function

GO:

id name namespace
GO:0043292 contractile fiber cellular_component
GO:0044449 obsolete contractile fiber part cellular_component
GO:0036379 myofilament cellular_component
GO:0005861 troponin complex cellular_component
GO:0005865 striated muscle thin filament cellular_component
GO:0030016 myofibril cellular_component
GO:0030017 sarcomere cellular_component
GO:0005509 calcium ion binding molecular_function

KEGG:

id description
ko00710 Carbon fixation in photosynthetic organisms

RNA

RNA id representative length rna type GC content exon number start site end site
TU269106 True 998 lncRNA 0.49 2 554490 555624

Neighbor

gene id symbol gene type direction distance location
crybb1 crybb1,LOC107588965,LOC107741660,LOC107567753,LOC107758629 coding downstream 47442 502578 ~ 507048 (-)
acads acads,LOC107567748,LOC107689539,LOC107589029,LOC107741687 coding downstream 52764 496051 ~ 501726 (-)
sept5b sept5b,LOC107658623,LOC107741689,LOC107567765,LOC107758631 coding downstream 71611 475111 ~ 482879 (-)
mctp1b mctp1b,LOC107741661,LOC107689511,LOC107758594,LOC107658566,LOC107588966,LOC107567740 coding downstream 80176 447201 ~ 474314 (-)
tlr8b LOC107589031,LOC107758595,LOC107658565 coding downstream 110820 439370 ~ 443670 (-)
npm2b npm2b,LOC107689977,LOC107567750,LOC107758627,LOC107588962,LOC107658627 coding upstream 43689 599313 ~ 601597 (-)
polm LOC107708201,LOC107658777,LOC107554523 coding upstream 243816 799440 ~ 806277 (-)
mrps24 mrps24,LOC107579488,LOC107658641,LOC107706797,LOC107708198,LOC107657830,LOC107554515 coding upstream 261380 817004 ~ 818998 (-)
pargl LOC107706751 coding upstream 345664 901288 ~ 908979 (-)
LOC122333746 dusp26,LOC107720817,LOC107656427,LOC107704179,LOC107706788 coding upstream 412403 968027 ~ 981324 (-)
G181353 NA non-coding downstream 44447 508169 ~ 510043 (-)
LOC122333706 NA non-coding downstream 116386 436048 ~ 438104 (-)
G181325 NA non-coding downstream 226263 326812 ~ 328227 (-)
G181309 NA non-coding downstream 248728 302073 ~ 305762 (-)
G181297 NA non-coding downstream 339793 213585 ~ 214697 (-)
G181362 NA non-coding upstream 9744 565368 ~ 565875 (-)
G181369 NA non-coding upstream 23348 578972 ~ 579640 (-)
G181371 NA non-coding upstream 31782 587406 ~ 587804 (-)
G181397 NA non-coding upstream 112141 667765 ~ 668266 (-)
LOC122333763 NA non-coding upstream 156943 712567 ~ 717373 (-)
cetn3 cetn3,LOC107758597,LOC107689496,LOC107658563,LOC107589032,LOC107602084,LOC107741664 other downstream 162555 388944 ~ 391935 (-)
LOC122333698 NA other downstream 227760 257630 ~ 326730 (-)
tmem167a tmem167a,LOC107658615,LOC107588977,LOC103397084 other downstream 372482 133827 ~ 182008 (-)
G181349 myo18b,LOC107758573,LOC107658543,LOC107589013,LOC107567742 other upstream 41268 596892 ~ 598645 (-)
tacr1b tacr1b,LOC107741654,LOC107706809,LOC107658568,LOC108425229,LOC107689601,LOC107577657 other upstream 118511 674135 ~ 682898 (-)
tuba7l tuba7l,LOC107658546,LOC105015227,LOC100136736,LOC108255233,LOC107706804,LOC105889199 other upstream 167530 723154 ~ 726562 (-)
G181475 LOC107741650,LOC107567757 other upstream 195320 750944 ~ 754507 (-)
purbb purb,LOC107588953,LOC107658638,LOC107706799,LOC107708205,LOC107657907,LOC107554550 other upstream 223603 779227 ~ 783680 (-)

Expression


Co-expression Network