G189952


Basic Information

Item Value
gene id G189952
gene name NA
gene type unknown
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048437.1
NCBI id JAEQBD010000782.1
chromosome length 782096
location 302929 ~ 306500 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU281865
ACAGTCTAGCAAAGAAAAGCATTCACTCTCTGTAAAAGAAAACGCCAAACAGGAAGTTCTGACACTACTCTTTAATCGTGGCTGATTTCAGTGCACTCAGCTCCTCTCTGCTCTCGCGGCCGGACACCGCGGGTCTTTCCCAGAGAATTTGCACGCCGGAGGACATCGGGCCGTCCCCACCTGAACACAGGCTTCAGGGACGGCCGTCACAGGTCTGGGCTTCACCGGCGGCGTCCAGCCGTCGAGCAGAGAGGAGACGCTCGTCTACTAACACACGGGACGGAGAGCGGCTTTCAGCCGAAGGGCTACAGGTACTTGGGAAGATCCTTCTCCACCAGCTTGGATCGTCCATTGGTCCATACCTCTTCACAACCTGACCTTCTCTGTCAATGAGgaactacaataaaaacaagagtTACGAGCTCACACTATTACAGCAGAACCAGACGAAGTCCAGCGCTTAACACGGTCACTCACCTTAGTGAAATTCCACTTGATGTTGTTCCCAGAGTGCCTTTTCCTTTGGGCTGCTCCTTCATCCACTTCCAGAGCGGGTGAGCTCCGTCGCCGTTCACCTCGATCTTACTGAACAGGTCAAACTCGGCGTTGTAGCCTTTGGCAAACTCCTTGATCTCCTCCTCCGTTCCAGGCTCCTGTTTCCAAACTGGTTGCAGGGGAAGCCCAGGATGCGTAAACCTTTCTCAGCGTACGTGGCGTGCATCGCCGCAAACTGAGTGTAGTTTACGGGAGTCTTACCTCATTTAGAGGCTACGTTAGTGACGATGCACACATAACccctgaaacaaacaaaacacagagcAAAGACTGAACGACGAGCTTCAGACAGGCAACACTTCAGCCCTCTGAGAGAAAGCAACGAATGAATCGTGGAGATGTTTTCTAAACGGTGCATAATGCACGATAATTCTTCCTTGAGTGAAAAAGCCCATTTTCGTTGGTCTCTCGCGtcacaaagcacacacacatttgcttgGAGCTGTTCTGGGTCTCTCCCGATTCAGACCGGAAACACTTTTTGTCACCGGAGGAAGCCAAAGCGTCTCAATGGATGCGTTTCTGATGAACTGcaatgttttctctctcttccgacggcacccattcgctgcagagcatccgtcgCTGCACACCGATGCAAGACGTTCCTCCAAATCTGGCCCGAGTTCAGTACATTTTCAAGAAACAGAACATTTCTACAAACCAGTCAGTTTTGTTCTTCATATCAGGGGCACGAGCGTCGACGTAGCTCACCTGTATTTGTCCAGAGACACTTCGTTTCCGTCGATGTCTTTGGCTGAGAAGTCGTATATGGATTTGGCCGACTGCCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281865 True 1346 TUCP 0.51 4 302929 306500

Neighbor

gene id symbol gene type direction distance location
polr2ea polr2ea,polr2e,LOC107660381,LOC107596300,LOC107669821 coding downstream 1821 298251 ~ 301108 (-)
tm6sf2a LOC107696370,LOC107748525,LOC107596302,LOC107660391 coding downstream 62602 228052 ~ 240327 (-)
eef2b eef2b,LOC107552698,LOC107696714,LOC107724979,LOC108427162 coding downstream 229592 63597 ~ 73337 (-)
rab11bb rab11bb,LOC107660390,LOC108427173,LOC105903927,LOC107552705,LOC108280567,LOC105900968 coding upstream 46130 352630 ~ 360520 (-)
LOC122335615 homer3,LOC107696283,LOC108427175,LOC107660377,LOC108280570 coding upstream 94921 401421 ~ 430858 (-)
upf1 upf1,LOC107724030,LOC107696277 coding upstream 126596 433096 ~ 452801 (-)
pgpep1 pgpep1,LOC107696873,LOC107552686,LOC107596298,LOC107660389,LOC107740549 coding upstream 148297 454797 ~ 462684 (-)
loxl5b LOC107740551,LOC107696862,LOC107596248,LOC107687932,LOC107578202 coding upstream 194810 501310 ~ 507603 (-)
G189922 LOC107696707,LOC107552674,LOC107596285,LOC107596284,LOC107660387,LOC107724973 non-coding downstream 106336 189246 ~ 196593 (-)
G189897 NA non-coding downstream 166916 108283 ~ 136013 (-)
G189896 slc25a42,LOC107552673,LOC107696381,LOC107671810,LOC107384089 non-coding downstream 197688 34028 ~ 105241 (-)
G189968 NA non-coding upstream 27241 333741 ~ 334195 (-)
G189972 NA non-coding upstream 36869 343369 ~ 345731 (-)
G189964 NA non-coding upstream 41146 347646 ~ 349845 (-)
G189981 cers4b,LOC107552707,LOC107723220,LOC107696307,LOC107596256,LOC107660386,LOC107724109 non-coding upstream 77507 384007 ~ 385713 (-)
G189970 NA non-coding upstream 86042 392542 ~ 393460 (-)
G189894 NA other downstream 277212 21472 ~ 25717 (-)
nmrk2 nmrk2,LOC107696854,LOC107552712,LOC107750947,LOC107723974,LOC107687917,LOC107596250 other upstream 211633 518133 ~ 521201 (-)
atcayb atcayb,LOC107552711,LOC107696247,LOC107687916,LOC107750922,LOC107596247 other upstream 216868 523368 ~ 541804 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G289329 NA non-coding CI01000075 null 1518990 ~ 1524862 (+)
rainbow trout (Oncorhynchus mykiss) G289421 NA non-coding NC_048567.1 CM023221.2 67591065 ~ 67591402 (-)