G189972


Basic Information

Item Value
gene id G189972
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NW_025048437.1
NCBI id JAEQBD010000782.1
chromosome length 782096
location 343369 ~ 345731 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU281904
tttaatttaacattatataacataatGGATAAGAATAAATGGAATAGAAATGTtactcattttataaaaatattaagtaattatattattattaatttatataattaaataaaatatttatatttattaaattaattaatattaattatattaatataattaattaccttaaatatgcattagggttaaaataaaatactgtatttttgttaccTTCAAGCGtttaaataagtattaaatattataacaataaatgaaataagaaaatgaataacgACCACTTTGATTTTTATGAGGgatctgttcctttaagactTTCTACTAATTTATGGACTTGATGAACAGATGCACGAATGAATGGCTGGATGGAGAGCGAGGGTGAAGCGATAAGCAGGGGTGTAGCTCCTTCTGAAAGGTCGGGGTTTGATCTGTTTGGGGAAGTGCTGTGGTTTGGAAGCCCAAACTTACTGTGTCGCTTTCACCGTGAGGCTCTGAGCCGTAATGAAGAGGAGAATAAACCCAACTCCTGTCTTCTGGAGTCTGCAGACACACCACCGCCACAGCAGAGGgcgccccacacacacacacacacacacacacacacacacacagagagagagagacgcagcCGCGAGGACgcatgaaacacacacagagacagaaagagcaaACGCATGAGGTGACGAGGAACAGAACATTTAGTGGAAGAATCAAACACAGATCACAGTGAGAACACACACTATCAGGCTCACACTACTTCACCGCTCTGCagtgcacagtacacacactttCAGTATGCAGGCCACTTATGGATTTTCTAACAGTCTGACACGCAGTGAAACGTAGAAAAATCGCAGTTGCTAAAGCAAACGTCTTTTGGTTTAACTTGTACCAAAACAACTAAAGGAAAAAACGggaaaagtcaataaaaatggaatcatataaataataacaataagcattaaaataaatacactactgtatttgaacatttttatgtttatgtaatctATGACTAAACAAGcgattaaaaaaacagcaaaataattaaaactaaaaactctAATTCATATTAATGAAAACTATAACAGTATCTCCGTCAATGTTCTTTTAGTATCACTGAAATAATAtcctcatttttattaatcGTTTGAATtaggttttatattttcatgtttttttttattttattgtttgctttggtaatttagtaaaaaaaaaattgcttacatttttattaattgctgcCTCATgtctaaatagttttttaataattctagTTAAtggttttagatattttagttaaattaaatcaatattttccCCTTGCAACTAgttgaaattttatatatatatatatatagtttgtttatttttttaaataaatatttttataaatatttttaaaatattttcctgaATATTTTTCCTTTGTTAGTCTGTTCTCAGTTTCAGGCATCAACCTAAAGGAATAATAATTTTGATACTTATCTTTTTTGACTCACTATTGGATTGGGCTGCAAATACGATGATTGCACACTACATTTAATTGATTGCATTAATCCCTGGACACTTGGAGAGGTCACGTGACCCCTGCACAGCACACCCCTGTATGAAACATACTCCCTTGATAAAGCTGAGTTAGCAGAAGCTAGTGCTATCGGGAATCTTGTCCATCAGAAGGAGAAAAACTACTGGACTATAAGACCTCCTAAAACTACAGCCTGCAGCAGGATTTCCCGACCCGGGGTTTGTGAGAGCGAATAGAAATGCCAAAGTGAAATGAAACTGTAGTCTAGATTTTATAATGTGGTATTGCTGGGAGGTCCTGCTCTCAGGCGTTCAGATCCATCGACTTACGACACTGCAGGAGCTGAGCTTCCTCCGCTGGAGAACCGGAGAGAAAACCCAGTATCTGCCCTCAGcgtactgacacacacacacacacacacacacacacacacacacacacacacagaggaatgAGTAAATAACAGACACGGACaggaaggaagagagagagacaggaaacaGATCGTGAAGATGCTGATGAATGAAACACACATCAAATGAATCTTTTATCAGAATGAAATTCTTGGCTTTTCCTTTTTAGCTCTTATTTTAAACACCATACATAGAAATCAAACTAGCActatttcatgttgactttaatgatttacattttGACTAAAAGTGTACAAAATAAGCACTGAAAACGAGAAATATGAcatctgaaaaaataataagtgtataaataatttttcaggGACTGCACTCACTAAGACAAGGTACaatattaagtaatataatagaatatatttaataataaaagtaaaata

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU281904 True 2339 lncRNA 0.34 2 343369 345731

Neighbor

gene id symbol gene type direction distance location
polr2ea polr2ea,polr2e,LOC107660381,LOC107596300,LOC107669821 coding downstream 42261 298251 ~ 301108 (-)
tm6sf2a LOC107696370,LOC107748525,LOC107596302,LOC107660391 coding downstream 103042 228052 ~ 240327 (-)
eef2b eef2b,LOC107552698,LOC107696714,LOC107724979,LOC108427162 coding downstream 270032 63597 ~ 73337 (-)
rab11bb rab11bb,LOC107660390,LOC108427173,LOC105903927,LOC107552705,LOC108280567,LOC105900968 coding upstream 6899 352630 ~ 360520 (-)
LOC122335615 homer3,LOC107696283,LOC108427175,LOC107660377,LOC108280570 coding upstream 55690 401421 ~ 430858 (-)
upf1 upf1,LOC107724030,LOC107696277 coding upstream 87365 433096 ~ 452801 (-)
pgpep1 pgpep1,LOC107696873,LOC107552686,LOC107596298,LOC107660389,LOC107740549 coding upstream 109066 454797 ~ 462684 (-)
loxl5b LOC107740551,LOC107696862,LOC107596248,LOC107687932,LOC107578202 coding upstream 155579 501310 ~ 507603 (-)
G189968 NA non-coding downstream 9174 333741 ~ 334195 (-)
G189922 LOC107696707,LOC107552674,LOC107596285,LOC107596284,LOC107660387,LOC107724973 non-coding downstream 146776 189246 ~ 196593 (-)
G189897 NA non-coding downstream 207356 108283 ~ 136013 (-)
G189896 slc25a42,LOC107552673,LOC107696381,LOC107671810,LOC107384089 non-coding downstream 238128 34028 ~ 105241 (-)
G189964 NA non-coding upstream 1915 347646 ~ 349845 (-)
G189981 cers4b,LOC107552707,LOC107723220,LOC107696307,LOC107596256,LOC107660386,LOC107724109 non-coding upstream 38276 384007 ~ 385713 (-)
G189970 NA non-coding upstream 46811 392542 ~ 393460 (-)
G189960 NA non-coding upstream 51127 396858 ~ 399129 (-)
G189988 jund,LOC107740545,LOC107696268 non-coding upstream 114950 460681 ~ 490100 (-)
G189952 NA other downstream 36869 302929 ~ 306500 (-)
G189894 NA other downstream 317652 21472 ~ 25717 (-)
nmrk2 nmrk2,LOC107696854,LOC107552712,LOC107750947,LOC107723974,LOC107687917,LOC107596250 other upstream 172402 518133 ~ 521201 (-)
atcayb atcayb,LOC107552711,LOC107696247,LOC107687916,LOC107750922,LOC107596247 other upstream 177637 523368 ~ 541804 (-)

Expression


Co-expression Network