CI01000004_06960750_06963258 (MPLKIP)


Basic Information

Item Value
gene id CI01000004_06960750_06963258
gene name MPLKIP
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 6959573 ~ 6963282 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_06960750_06963258.mRNA
AGTGTAGGAAAATACCACGACAGGATGCAAAGACCACAGTTTCGCCATCCCCGCCAGGGCTCGGGTCCACGGGCAGCAGGCTTCCGCAGTCCGCCTCCAGCTTACGACAGGGCAGGGAGTATGTTTCCATCGCCTCCGTGGGCATTTTCTACCCCGCCGCCGCCGTTTGGACCGAGATTTGGACATTGTTCTCCCAATACCCCACCGAGAGAGTTTTGTGGTAATAGGGGCGGCGGCGGCGGTGGTGGGAAATATTATAACAGTCAGTCTCCGGGTCACACACCGCGCAGATCGAACGCCAGTCCCCGAGGCGCACCGTTCAGACGCTCGCCGTATGAGAGCCCCGGGCGACACGCTGGATATCAGGGTTCACCACGGACATCCACACCGTTTGGGTCAGCGCATGGCAGGGAGAGAGGGACAAATGATATGGAAAAATATTACAAACCATCAATGCTCCAAGATCCCTGGGCTGACCTTCAGCCTATCTCAGTCACACAAACTCAGTCTAAATGCAACTACAAACAAACCAATACAAGCAGACAAGGGAGAGTAGCCACCTGGACCAGGTGTCTGAAATGCAGATTATGTCCAGCCCTTTTAGAGTGTCTTAGTTTTAGTATGAGCGAGTATGATTTCGCAATATTCTCTTACCCTCAAAATAACTAAAATTTACAATAGAAAATATAATTACACAGGATACAAGTTGCAAGAAAATTTAAATTGCATATAAGTTCTAATAAA

Function

symbol description
mplkip Human ortholog(s) of this gene implicated in nonphotosensitive trichothiodystrophy 4. Orthologous to human MPLKIP (M-phase specific PLK1 interacting protein).

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_06960750_06963258.mRNA False 744 mRNA 0.50 3 6960675 6963282

Neighbor

gene id symbol gene type direction distance location
CI01000004_06915152_06921193 FBXL7 coding downstream 39482 6914589 ~ 6921193 (-)
CI01000004_06827636_06828127 NA coding downstream 132311 6827444 ~ 6828364 (-)
CI01000004_06805399_06814604 CAR8, CA8 coding downstream 146071 6805217 ~ 6814604 (-)
CI01000004_06677179_06740196 TOX coding downstream 220479 6677179 ~ 6740196 (-)
CI01000004_06569673_06570071 NA coding downstream 390504 6569596 ~ 6570171 (-)
CI01000004_07008022_07016495 INHBAB coding upstream 44546 7007828 ~ 7017478 (-)
CI01000004_07024832_07032532 AFG3L2 coding upstream 60411 7023693 ~ 7033161 (-)
CI01000004_07055639_07067152 CTDSPL, CTDSPLA, CTDSPLB coding upstream 92128 7055410 ~ 7067152 (-)
CI01000004_07091217_07093407 ZBTB47 coding upstream 127918 7091200 ~ 7093407 (-)
CI01000004_07102190_07122451 VIPR1A coding upstream 137763 7101045 ~ 7122451 (-)
G29433 NA non-coding downstream 63420 6897021 ~ 6897255 (-)
G29414 NA non-coding downstream 63725 6821967 ~ 6896950 (-)
G29351 NA non-coding downstream 84812 6872572 ~ 6875863 (-)
G29411 NA non-coding downstream 156288 6804003 ~ 6804387 (-)
G29408 NA non-coding downstream 165054 6795322 ~ 6795621 (-)
G29441 NA non-coding upstream 851 6964133 ~ 6964337 (-)
G29451 NA non-coding upstream 14104 6977386 ~ 6977609 (-)
G29476 NA non-coding upstream 134460 7097742 ~ 7097980 (-)
G29358 NA non-coding upstream 185900 7149182 ~ 7150510 (-)
CI01000004_07256668_07257382 NA non-coding upstream 294457 7256365 ~ 7258480 (-)
G29388 NA other downstream 328768 6631293 ~ 6631907 (-)
CI01000004_06539836_06541252 NA other downstream 415103 6538904 ~ 6541252 (-)
CI01000004_05617072_05627369 NA other downstream 1333161 5616644 ~ 5628289 (-)
G27746 NA other downstream 1756951 5178227 ~ 5203724 (-)
G26788 NA other downstream 3684954 3267683 ~ 3275721 (-)
G29656 NA other upstream 1001082 7964364 ~ 7965500 (-)
G29746 NA other upstream 1391216 8354498 ~ 8358127 (-)
G30316 NA other upstream 2414655 9377937 ~ 9406921 (-)
G31203 NA other upstream 3783155 10746437 ~ 10750641 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 other upstream 4444183 11406957 ~ 11412907 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015389 mplkip coding NC_007113.7 CM002886.2 21605547 ~ 21607784 (+)