CI01000004_11407198_11412220 (ADCYAP1B, ADCYAP1)


Basic Information

Item Value
gene id CI01000004_11407198_11412220
gene name ADCYAP1B, ADCYAP1
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11406957 ~ 11412907 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11407198_11412220.mRNA
ATAAGCAAAGGACGGTGGCGCTTCAGGGAAGAGGTGCTGTGAGGAAGATCTCTATCTCTCTCACACAACCATAGCCGCACCCGAGTCGCATCCAACAGCATTTCTATCTACCTACTCTGCAATAGGTATGTTTAACATCCGACAAAGGCGTTTTTATTCGGTTTAAGCCAAGGAATTATGATACGAAGACGCTCAGACAACTGGATTTTTTCCTTTTCTAAAGATTATCTACCGGTTTTATTGTTTGCCTCATCGGGAGAAGGATTCTGTTGCGCGTGCATGGCATTCTTTAAACTTTTCAAATCATCTTACGAGCGGAAAATACGAGTAAAAAAGTAACCTGTTTTGCCTTTCTGGATTTTTTTCTTAACAAAAGTTCTTTGCGTATTATATCGAATAGAATAAAACCCATCATAAGCAACAAATAAACCAATGAAATTGTAAATTCACCTGGACCGTATCGTGGCTAGCCTACTCTATAAGTGTTTTATATTTTTTTAAGTTATTTATTTAACTTTCTTGTGTCTTTACAGCATGGCCAGATCTAGTAAAGCGACTTTAGCGTTGCTCATCTACGGAATCATGATGCACTACAGCGCCTACTGCACGCCTATTGGGATGGCTTTTCCTAAGATGAGACTAGACAACGATGTATTTGACGAAGACGGAAACTCGTTAAGCGACCTGGCTTTTGGCACGGATCAAATTGCTATACGAAGTCCTCCTTCTCTTACGGATGACCTATACACGCTATACTATCCTCCAGAGAAAAGAACGGAAAGGCATGCAGATGGATTATTAGATAGAGCCTTGAGGGACATCCTGGTTCAGTTATCAGCACGAAAATATCTGCATTCTCTGATGGCAGTTCGCGTAGGCGGAGGAAGCAGCGAGGAAGACGAATCGGAACCATTATCAAAAAGGCATTCGGATGGGATCTTCACCGACATTTACAGTCGCTACCGAAAACAGATGGCCGTCAAGAAGTATTTAGCAGCCGTCCTGGGAAGAAGGCTTTATGTGAGTATGGATGCGGCTCTGATAGTGTTATGCGAGGAGCGCGTGTGGAAGGGCGGGAGGCTACTTCTATCCACACAAGCACACGATGAAGGCTCACGCTGTGACACTAATGATAGACCAAAACCCACTGCTGTTCAAGATGTGTAATCAGTATAATTCAGATCTCCATATATCACTGTGGGTGAGCTGAGTGGTTGTGACAGCTTTAATTTATACTCACAACAATCAGAACATTCACATCGAGTCAGTGATCCTGGGCGGCTAGGTCAAGAGTGACCCTCAACGAACCACCCACTTCAACACTGACAGCACATATGTACGCAAAGATTTTTACTCATACAGTAAACAAAGATAAATAAGAAACATTCACAAAAATATTCCAAATAAA
>TU36279
AAAATCCGAGGAAATCGGAGCACAGCAGAAAAGTTTTGTAAAAGGACATGTAGACAAACGAGTGCTGCTGATTTCACCGAGGTTTTGTTTGCAAAAGTGATTTTGTGTATATTGGTTATTGTATAAAAGTGCAGGGGTTGAACCGACGAGCACATAAGCAAAGGACGGTGGCGCTTCAGGGAAGAGGTGCTGTGAGGAAGATCTCTATCTCTCTCACACAACCATAGCCGCACCCGAGTCGCATCCAACAGCATTTCTATCTACCTACTCTGCAATAGCATGGCCAGATCTAGTAAAGCGACTTTAGCGTTGCTCATCTACGGAATCATGATGCACTACAGCGCCTACTGCACGCCTATTGGGATGGCTTTTCCTAAGATGAGACTAGACAACGATGTATTTGACGAAGACGGAAACTCGTTAAGCGACCTGGCTTTTGGCACGGATCAAATTGCTATACGAAGTCCTCCTTCTCTTACGGATGACCTATACACGCTATACTATCCTCCAGAGAAAAGCGGAGGAAGCAGCGAGGAAGACGAATCGGAACCATTATCAAAAAGGCATTCGGATGGGATCTTCACCGACATTTACAGTCGCTACCGAAAACAGATGGCCGTCAAGAAGTATTTAGCAGCCGTCCTGGGAAGAAGGTACAGACAGAGAATTAAAAACAAAGGACGTCGATTTGCTTATTTGTAGCGCTGACAAAACTGCCCCCAACTGCCCCTCCATGTGTACATTCAGTCCTAAGATCAAAGTCATTCTGATATAACTGATTAATCAGTGGATCGCGCCTGTGTTCTTTAAACATGTATTTATGTATGAAGTAAAGCCATTAAAATGAATATTTTACTAATAACATTGTTTTTCTTTTTGTACAAAAGCACTTGAAACCGCACAGTTATACTTTGTGGACCAACCTTCAGTTTCATGTATATAGCTATATATGTTGAAAACAAAAGAAAACAAAAACCATCAGGAGAAAAAAAAAAAAAAAAAAAAAGATGAAAAAAAAATGTGCACCTTGAACGTTATGCGCCTGATATCTTTTCAAATTCATCATCATATGCAGAAAATAAATAGATTTTAAAAAGACAATCAAAGTTCTGAATGTTATACTTATTTTTGTAATCTGCTAAAAGAATAGAGTCTTATTTTATCCAAAGTCTGCCCAGGGATGTATGGGACATACTCTGTAAAGTACAGGGCTGTTTCAACTGTTGTGACTCCCCCCTAAAAGCAGGAGTGGGAGAGGGATATTTAGTAGCTGGCACGATTCCCTCTTTCTTAGCCCACTCATTTATGAACTGTACTTCAAATCACCTGTCTTCTCCGGATGGAATGTGATTGTCCTGCCTGTGTTTGTGATTGGAGCCAGTAACCAGTATGCCTGACTGGAAAAAAATGACACTGGAGTAACATGTTTTTTTTCTTGATGAATTTTCTTTCTATTGTTTCTTTTTTTCTTCATCATCTCAGTGCATGGTATACTTATAATGTATACATGCATGTCCTTTGTTTCCCATCCATTATCATTGTATTGGTCCCTCCATCAGAAACTACACTAGATCCGCCTCTGTGGAAGCAGGAGTATTTTTTTTTAATCAAATCGAATTGAAAAGAATTGAACAAGCACTAACATTCAAATGCATTCTCCATTGAGCTCCTAAAACGTTTTGTGGAATTGGCGTGTCGGTCTCTCTCTCAGTTCTTTGCATGCTTTCAATGCCCTTTGACCGAATTTTGAAGCTGTGAATGCTTTAGTATGCAGTTAGGCTAGAGTAGCAAGTCATTGGATGACATAACGATCTTCTGACGCCGCCCCAATTTTAAAATTCTCTGTGTTATAATGTGCCAGTTAAGAAATGAATGCAGTGGATGGTCCCCTCATGCCCATGACTTGATAGTGAACCTTCTTCAGTGGCGCGATCGCTCTTTAATAGATAGGACGAAGTATGCTTAACGGTTTCATTCATCGCCTCATCATAGATCTAGAAAAAAAATCAATCGTGTTATCTGTAATTGGTGCTGATGACTGAGGGAATGTGAGGCTGAGAGAACGGGGAGGCCAACGAAAGCGAAGGGGGAGGTCCTTGTGAACTTCAACGTGACCATTGTCATATTCATTATCCTTACTGCCAGATAGTGCTTTTGCATGTTGAAGATAGCCTTTCTCTTGTATGTATAGATGAGGAACACTACACCCATCGCCCTTAGGGAGGGACACACTGCAAAATCATCTATTTGTTGTTGTTGTTTTTTTTTTGTTTTGTTTTTAAATCATATATTTTGGTAAAAGCCTGTATTGAATTCAGTATATTTCTCCTGATATGGAAATCAGGTCTTATTCATCCACTAATTCAATATGTAAACCGTTGTCCCAGGCATGAAATCAATCTTTCTTCAATTTGGCATTGTCCCCCAGGCTTTATGTGAGTATGGATGCGGCTCTGATAGTGTTATGCGAGGAGCGCGTGTGGAAGGGCGGGAGGTGGGTGGGAGAGCGAATGCGTGCGTGAACATAATGATGTTATGAAAGATGATATGGGTTTTGGCTTAGGTGCCTTGTGACAACTTACGATAAAAAAATCGCCACTTATCACGGATGGCAATTTTAGTGGCCCTACAATGCTGCAAACTATTAGGTTCCATTTCATGAACTCCATCTTTACTTTTCCTCTCCTTTTCTTTTCGAAACTTGGTTTCAAACCTAATTCTTTAATTAGAGCTGAAAAGCATGGCCAGCATATATTGTGATCAAATCTATTACTGAAGTGGTGTACATGGTAAAAGTATTAATTGTCTGGATTGTTTAAGCTGATGAATGTGTGTAAATGTGGCAAGCACGTGTTTCTGTTTAGCTCTACTCATTGTAGCTCAAGGTCCATGAAGCCTATAGCTAGGTTTTGTGTTGTTTCCTGTTGCATAGCTTGAGGGTTTTTTGACAACGATTGGAAAACCTGACAGAACCCAGGCCACAGCACAGCCTGTTGTGTACATTTCTGAAAGCGCCGAAAGCCTTAATGTGAACGTTTTATCTATACCTGAAACATTATATATGTGACAAGTGAATATTAGCAAGTGA

Function

symbol description
adcyap1b Predicted to enable neuropeptide hormone activity; peptide hormone receptor binding activity; and pituitary adenylate cyclase activating polypeptide activity. Acts upstream of or within brain development and camera-type eye development. Predicted to be located in extracellular region. Predicted to be active in neuron projection and perikaryon. Is expressed in several structures, including basal plate midbrain region; male organism; nervous system; spleen; and trigeminal placode. Orthologous to human ADCYAP1 (adenylate cyclase activating polypeptide 1).
adcyap1 Enables neuropeptide hormone activity; peptide hormone receptor binding activity; and pituitary adenylate cyclase activating polypeptide activity. Involved in several processes, including G protein-coupled receptor signaling pathway; positive regulation of macromolecule metabolic process; and regulation of signal transduction. Predicted to be located in extracellular region. Predicted to be active in neuron projection and perikaryon.

GO:

id name namespace
GO:0005179 hormone activity molecular_function

KEGG:

id description
K05262 ADCYAP; pituitary adenylate cyclase-activating polypeptide

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11407198_11412220.mRNA False 1408 mRNA 0.42 6 11406957 11412754
TU36279 True 3088 TUCP 0.40 4 11407465 11412907

Neighbor

gene id symbol gene type direction distance location
CI01000004_11232801_11249384 NA coding downstream 157573 11231443 ~ 11249384 (-)
CI01000004_11172493_11174547 MYL12.2, MYL12.1, MLRN, MYL12A, MYL9 coding downstream 231090 11172215 ~ 11175867 (-)
CI01000004_11073846_11086948 NA coding downstream 320009 11073679 ~ 11086948 (-)
CI01000004_11052319_11059170 RP1 coding downstream 347787 11051394 ~ 11059170 (-)
CI01000004_11043026_11046108 NA coding downstream 360849 11042880 ~ 11046108 (-)
CI01000004_11454536_11463067 NA coding upstream 41671 11454425 ~ 11464551 (-)
CI01000004_11565906_11578581 MRC1 coding upstream 152231 11564985 ~ 11578946 (-)
CI01000004_11637053_11663228 NA coding upstream 224244 11636998 ~ 11663318 (-)
CI01000004_11674138_11680916 E2F5 coding upstream 260981 11673735 ~ 11680916 (-)
CI01000004_11681649_11693474 LRRCC1 coding upstream 268703 11681457 ~ 11693474 (-)
G31580 NA non-coding downstream 75388 11331311 ~ 11331569 (-)
G31542 NA non-coding downstream 217981 11188482 ~ 11188976 (-)
G31486 NA non-coding downstream 337234 11069225 ~ 11069723 (-)
G31484 NA non-coding downstream 339071 11062670 ~ 11067886 (-)
G31466 NA non-coding downstream 472250 10934298 ~ 10934707 (-)
G32059 NA non-coding upstream 91886 11504640 ~ 11504863 (-)
G32103 NA non-coding upstream 125677 11538431 ~ 11541526 (-)
G32111 NA non-coding upstream 168695 11581449 ~ 11581990 (-)
G32112 NA non-coding upstream 171389 11584143 ~ 11584391 (-)
G32117 NA non-coding upstream 196270 11609024 ~ 11618594 (-)
G31203 NA other downstream 656316 10746437 ~ 10750641 (-)
G30316 NA other downstream 2000036 9377937 ~ 9406921 (-)
G29746 NA other downstream 3048830 8354498 ~ 8358127 (-)
G29656 NA other downstream 3441457 7964364 ~ 7965500 (-)
G29388 NA other downstream 4775050 6631293 ~ 6631907 (-)
G32150 NA other upstream 363765 11776519 ~ 11780951 (-)
G32207 NA other upstream 963414 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 3138046 14541515 ~ 14551352 (-)
G33746 NA other upstream 3156039 14568793 ~ 14569264 (-)
G33750 NA other upstream 3165704 14578458 ~ 14579001 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) G15957 NA non-coding CI01000001 null 5447301 ~ 5447941 (+)
bowfin (Amia calva) AMCG00019671 adcyap1,paca,LOC106578701 misc CM030124.1 CM030124.1 36292346 ~ 36299547 (+)
tiger barb (Puntius tetrazona) adcyap1b adcyap1b,adcyap1,LOC107713980,LOC107686049,LOC107751550,LOC107664073 misc NC_056700.1 CM032069.1 14578995 ~ 14610266 (-)