CI01000004_11565906_11578581 (MRC1)



Basic Information


Item Value
gene id CI01000004_11565906_11578581
gene name MRC1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information


Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11564985 ~ 11578946 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence


>CI01000004_11565906_11578581.mRNA
ATTGAGACTGCAGAAGCTCCGCCAAAGAGAGGATGACACTGGAATAAACTCACAAGCAGCAAAGAACATATTTTGGATTAAGATGAAAACAATTACAGTAGTTATTTTGCTTGTATTAGAACTATCAAACTGCTTTGCACAGTCAGGTATGTATTTTAATAATGAACAATAATGATCATACATTTTGTTGTTGCAAAAAGTATTACTTATTGTGAAAAAAGCCACTTGTCTCTTTGTGTTGTTTTTTTGTTTTGTTTTGTTTTTTTATGCTAAACTGAATGTGAATAGCTGAACACTGCATCATCTCATCCTATTTTTGTGCAGGAGGAAACTTTTTAATATATAATGTGGGTAATAACAAATGCATGTCAAACTTCCTGGAACGACTCGTCAACTGTGACCAATTCAGTAGATCACAACAGTTCCGTTGGACATCGAAAAATCGCATTTTGAACACTTTCACAAAGAAATGCCTTGGAGTAGGAAGTAAAGCAGTGGGCAAAACACTGCAGTGGCTGAAATGTGAAGATGACAGTGTTTTGCAGAAGTGGGAATGTCACAGTGGTACATTTCTTGGCCTAAAGAATGAATCTCTGTACCTTGCTGTAAATAGTAACAGTGTGCCAGTGATCTCTGCAGACACTGGAATAAATAGCAAATGGACAATTCATGGAACACTGAACAACATTTGCTCTCAGCCTTATGAAGAAATGTACACCATTGATGGAAATGCATTTGGGCGGCCATGTCAGTTTCCTTTTTTTTATGAGACAAAATGGTATGCAGATTGTACCACAGATGATGAGCAAAATAAACGCCTATGGTGTGCCATTGAGACTGACTACAATGATAATCAGCTGTGGGGCTACTGCCCAACACGTGAAAATACATTTTGGTCCAAACATCCTCTGACAAATGTCTATTACCAAGTGAATGAAAGATCAGCCCTGACATGGTACCAGGCTAGAAAGAGTTGCCAGCAGCAGGGTGCAGAGCTGCTGAGTGTCTCTGAATCTCATGAACACACCTTTATAGCAGGATTAGTTCAGAAGACACAAAGCTCACTATGGACAGGACTAAACAAATTAGATGTGTCCAGTGGATGGCAGTGGAGCAATGGACAACCTTTACGTTATCTGAAATGGCTCAGTGGTTTCCCAACCACGCAACCAGGCTACAGTTGTGGTGTCCTGAAAAATGCTTTTGGTTCTGAATGGTCAAACGAACCTTGTTCGGAAAAACATGGGTACATCTGCCAAAAAGGCCATTCTGTTCCTACCATTCCACCAGTGGTGAACACTGGATTTTGCCAAAGCCCCTGGATTCCATATTCAGGCAACTGTTATCTGCTTCATCGCAACAAGCGAACATGGATGGAGGCGCGAGATGTATGTCTGCGGGAAGGAGGAGACCTGCTGAGTATCCTCAACACAGAAGAGCAGAGCTTTGCCATCACACAGCTTGGATACTTGAAGACAGACGAGCTGTGGATTGGTTTCAATGACCGCAAAACTCAGATGCTGTTTGAGTGGAGTGACCAGTCTAGTGTCCCGTTTGCCTCATGGGAGGTGGGGGAGCCGAGTCACAATGCTCTTCATGCAGAGGACTGTGTGTTAATGAGGGGAGAGGAGGGAAAGTGGGCTGATGATATTTGTGAGAACAAGTATGGATTCATCTGCAAGAAGAAGGCCAGCTCTAAAGCCTCAAATAATGACACAGTTGTCACAAGCCCAGGATGCAAAACGGGTTGGACCAGGTATGGGTACTACTGCTACATGGCAGGATCTGAGACAAAGACCTTTGATGAAGCAAAACAGATGTGTGAAAAAGCTGAGTCTCAACTGGTTGATATTTCCTCCAGAATAGAAAATGCGTTTCTGGTTAGTCTAGTAGGAGCACGACCAGAAAAGTACTTCTGGATTGGATTGTCTAATCAGAAGGATCTGCACACTTTTGAATGGACCAACAACAAGCAAGTCCCATTTACTCATTTCAACGCTGGGATGCCAGGAAGAAAACAAGGCTGTGTTGCCATGACGACTGGAATTATTGCTGGGGTTTGGGATGTGCTCAGCTGCTCAAATAAGGAAAAATACATCTGCAAGCAGAGAGCTGAAGGACTAGTTACAACTCCAGCCCCGACAACCCATCCTGCCCTGGGCTGTCCTGAAGAATGGATGGCACTTGCATCTAGAGACCTTTGTGTCAAGTATTTTAATGTACCTTCATCTCAAATGAAGACTTGGGATGAAGCTCTTGACTTCTGCCGAGAGCTTGGTGGTGATCTTCTGAGCATCCATCATGAATCGGATATTCCTTGGAAACAAGGAGGAGGGTATCCAGCATGGATTGGTTATAGAATGTACGATCCCTCGGTGGGTTATGTTTGGAGTGATGGTTCTTCGTCATCCTATCAAAGCTGGGCCAGTGATGAACCAAACAATTTGAACAACATTGAAAACTGTGTTGAAATGAGAGTTTCAATGTGGGACAATGATGGAATGTGGAATGACGTGAACTGTCACGACAAAAAGGACTGGCACTGTCAGATTCGAAAAGGAAAGACCCCAAAGGAAGTAAATATTACAAGTCCAGTTTATAATGAAACAGAGGATGGCTGGATTATATTCAGAAGTGATCAGTATTATATATCTGAATACTCATCAATGTCTGTGCACGAGGCACGGACATTCTGTAAGAAATCACATGGCGATCTTGTGGTTATCAATGATGAGGAAGAGCGGCTGTTTCTCTGGCATAAGGCTAAATGGTTGCACAATGATATTATCATTGGTTTGACAGTTGATCTGGATGGGTCTTACGAGTGGCTGGATGGGTCCCCTGTAGTATTTCAAGCTTGGGAAGCGAATCAGCCGGCCTTTAAAAACAGTGAGGAAAGATGTGTGAAGATGACCACCTCTCAAGGACTCTGGGAAACTGTCAACTGTGGTGATGAATATAATTTTGCTTGTAAGCGAAGTGAGTCTCCTCCAGTTAATACCACGGTGGCCCCTACACAAAAGCCAAAAGGAGGCTGTGCTCCTGAGTGGAAGAACTTCGATGGAAAATGTTATAAAGTGAAGGAAGACATGAAAACATGGACAGAAGCAAGAGAATACTGCAGAGAGCTTGGTGGAGATCTGTCATCTATTATGAATAGAAAACAACAAGCCTTTTTAACCACAATGCTTAGAGATAAAACCACAGACTTCTGGATTGGATTCAGCAATTTGGCAAACGGGAGGTTCAAGTGGACAGATGGGAGTCAAGTTGCGTTCACAGAGTGGGCCAAAGGGGAACCTCAAAACTATCGATGGCATTCATACTATTGGACAAAATATCACTATTCAGATGAACAGGAATGTGCTGTTATGGGCATTGGTTCAGGCTCTTTTGGCAAGTGGGTGGCAACCGACTGTAATTCTACTCACGGTTTCATCTGCAGTCGTGATATTGATCCTGGTATTGCCCCAGTGCCAACTGAACTTCCTAAAACCTTTGTCAAGCTCGGAAATTCATCTTTCAAAGTGATTCAAGAAAACCTAACATGGAGTGAGGCAAACCGTCGCTGTGAGGCAGAGGGGGCTCATCTTGCCAGCATTCGGGACTTGGTGACACAAGCTTACCTTGAGCTGCAGGTCTTCAGAGCCCAGCAGCCCATGTGGATTGGTCTCAACAGTGTGAAGTCAAATGGATATTTTCTATGGGCGAATAACTGGCCCATGAAAATTGAGAAATGGGCACCTTCTGAACCACGGCCCAACCGCCCCTGTGCATACATGGGAATAGAAGGAGAATGGAGAACGACTCTCTGCAATCAAACCTTCTACAGTATCTGTGAGCAAACAACAGACATTGCCCCGACTCTTCCACCTCAGCAACCTGGACATTGCCCAAAAGAAGATGATGACAGTCCTTTCAGGTGGATACCTTACAAAGACAGTTGCTATGCTTTTGTGACGGAAATGAAACCATGGAGCAGAGCGGCTAGACTCTGTATGACATGGGGATCATCTCTTGTCAGCATTAGGGATGAAGCGGAAGAGAAGTTTATAGATGCCAACCTCGTGCTCCTTGAAAGTTACAAAGACTTTTGGATTGGACTTTTCCACACCCAGAAAGGACACTGGTTATGGTCAGACAACAGCGTGGTAGATTACACTAACTGGGCATCTACAAACGATTATGAAGATGACTATGAAGACCACTCTTGGAATCCTGACTGTGCATTAATCTCTACCAAATCTAAAAAATGGAAAAAACGGCATTGTGATTACACAGTCTTGCCATTTATCTGCAAAACCCCCAAAGGTAGTGAACCTCACAGGGTCAATACCGGTTTGGCTGTGTTCTTGAGTATTGCAGTGGTCTGCATATTGGGAGCTCTAGCGTACATTTACTACAGAAGTTCAAAAAGACTGTTATTGCCTACATTTGAAAATCCCATGTATCAAAACACAGAGGGTGCTAATTCAGATAGTAAAGATAACAAAACATTGCTTGGCCACATTGAGATAGCTGAATAGACCTGTGTTTTATATTGTCCCAGTACTTGTATATATGTAAGGGATAATGTACACTCAGCCGGTCATAATCATAAAATAAACAATGGCAGGGATCATCAGGTTTATTTTGCGATAATGGCTGTACTTTATCCTGCTTCATACTGTACATGGCTACTCAGCAAATAAATATTGATTTTGGTAGAAATAATTTTATGTCAGAAAAAATGCAGCTATGTAGGAATCAGTTGTCAATTCTGTCAGGACCACTATCGTCGAATATGATTGATAATTGCATAGAGTTTGTATTGGCGGTATTGTTCCATTCTGGGCAAGAATTCCCTGCACATCCATGCAGCCTAGCAAGGATAAGAGCAGGGAGAGCAGCAATACTAAAAAAAAAAGGGTAAACAGAACAGAACCAACATATGCAGATATTAGTCAATAATTTAACATGTACGCATATTCCAAGAATTAGTCTGATTTAGGGGAATCAGAAGGCCAAATCCTGACTGGACGACAAGAGGAGCTGGGGATAGAGGAGGGTAATTAGCTCCTGAGAAGTGCGATAGCTGCTGATAATATTGAGGAGCTTATATATGGATGCTGTGATAGGCGTCGTATTCCTATAGGTAGACGTGAGTCACCTGGGAGTCAGCTGATGCAAGCTTGACTGACATGACCTGCCAGAACCGATGCTATGCTTGATTTATATAGTTTAGCAGTCATTATGCAAAAAAAATATCTGACTGCAGAATGGTGTAAATGACTAATCAGAATCAAATATTTCAACGAGTCAACCAACATGAAAGGAAATTGCTGATTTAATATGGCATTGCCATTGTCCTGTATAGTTTCCTGTGATGCTATTTCAAGGCTTTTGTACAAGTTTTCAGAAGTTTTTAAAATGTTTTTCTAGTTGAATAAGAACTGTCTCTAAATAAA

Function


symbol description
mrc1 Enables cargo receptor activity. Involved in receptor-mediated endocytosis. Located in endosome membrane and plasma membrane.

GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
CI01000004_11565906_11578581.mRNA True 5447 mRNA 0.42 29 11564985 11578946

Neighbor


gene id symbol gene type direction distance location
CI01000004_11454536_11463067 NA coding downstream 100434 11454425 ~ 11464551 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 coding downstream 152231 11406957 ~ 11412907 (-)
CI01000004_11232801_11249384 NA coding downstream 315601 11231443 ~ 11249384 (-)
CI01000004_11172493_11174547 MYL12.2, MYL12.1, MLRN, MYL12A, MYL9 coding downstream 389118 11172215 ~ 11175867 (-)
CI01000004_11073846_11086948 NA coding downstream 478037 11073679 ~ 11086948 (-)
CI01000004_11637053_11663228 NA coding upstream 58052 11636998 ~ 11663318 (-)
CI01000004_11674138_11680916 E2F5 coding upstream 94789 11673735 ~ 11680916 (-)
CI01000004_11681649_11693474 LRRCC1 coding upstream 102511 11681457 ~ 11693474 (-)
CI01000004_11695427_11698763 NA coding upstream 115574 11694520 ~ 11698763 (-)
CI01000004_11720195_11723994 AND2 coding upstream 140842 11719788 ~ 11723994 (-)
G32103 NA non-coding downstream 23459 11538431 ~ 11541526 (-)
G32059 NA non-coding downstream 60122 11504640 ~ 11504863 (-)
G31580 NA non-coding downstream 233416 11331311 ~ 11331569 (-)
G31542 NA non-coding downstream 376009 11188482 ~ 11188976 (-)
G31486 NA non-coding downstream 495262 11069225 ~ 11069723 (-)
G32111 NA non-coding upstream 2503 11581449 ~ 11581990 (-)
G32112 NA non-coding upstream 5197 11584143 ~ 11584391 (-)
G32117 NA non-coding upstream 30078 11609024 ~ 11618594 (-)
G32118 NA non-coding upstream 40874 11619820 ~ 11620732 (-)
G32067 NA non-coding upstream 85487 11664433 ~ 11667577 (-)
G31203 NA other downstream 814344 10746437 ~ 10750641 (-)
G30316 NA other downstream 2158064 9377937 ~ 9406921 (-)
G29746 NA other downstream 3206858 8354498 ~ 8358127 (-)
G29656 NA other downstream 3599485 7964364 ~ 7965500 (-)
G32150 NA other upstream 197573 11776519 ~ 11780951 (-)
G32207 NA other upstream 797222 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 2971854 14541515 ~ 14551352 (-)
G33746 NA other upstream 2989847 14568793 ~ 14569264 (-)
G33750 NA other upstream 2999512 14578458 ~ 14579001 (-)

Expression



Co-expression Network


Homologous


species gene id symbol gene type chromosome NCBI id location