CI01000004_11172493_11174547 (MYL12.2, MYL12.1, MLRN, MYL12A, MYL9)


Basic Information

Item Value
gene id CI01000004_11172493_11174547
gene name MYL12.2, MYL12.1, MLRN, MYL12A, MYL9
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11172215 ~ 11175867 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11172493_11174547.mRNA
AGAGTGGCAAGCCTAAGTTCCTGTCAGTCAAATTAGGGGATCGAAACTGTTGTATAAATCATATCTAAGATATTATGGTAAGATATGATTATTTTAGATACGTTTATACGCAATTTGGAATGCTGTCCCTTTCAGGTACTGAACACTGCTGTCATATTAAAAAAAAAAAAATTGCTATTAAACACAAGTATTATATTAATATAAAAACTATTTTAGAGGCTATATTTTAAAAAAAATTCTAGAGGCTATTTTTATATAGGCTATTTTCTAGAGGCTATTTTTATATATAATTTTAATGTTTTTAAAATTAGCTCTATGTAACATAATGCTTGTGTAAAAAAAAAAAAAAAAAAAAACAGAATGTTTAGTTACCAGCTTAAATGTTTTTTTGTTTTTTGTAATTTAACTAAACTAATTTAATTAAACTAAATATGACATGTAGCTAATATATAGAAACCATAATGACCATAAACACACCCGTTACCTTACTGTAACAATTCACCTATTATTTTTATTATTTATCAGTCAGTTTGGCATTCTTCCTATTTGATCATTTGAACCCACCCCTACAGAATAACTCATGGGCTATTCCAGTCCGTGATGTAATGATATGTCGATGGGACTCTCCCATTACACTAATCTAAAGAGGGGTGCTGTTGTGGGGCTTCAGCGTGGCAGCCGTTGTTTAGGTGTTCTGCCTTTTTTACCGGAATAGGTACGTCTAATTTTACTAAATTTACGGCACCAGTATCTCCAAACTAGTTGAAGGTATTTTTATGTGTGAAATCTGACGTTATAGTTTTATAATTTATATTACACTCGACACAGACTACTGAATACAATAAAGCCAGCTCCGTTGCTAGCTAGCTTATTAGTAACTATGTGTTATGCTGCTTCCCGTCAACATATCAAGCTTTCTTATTGGCCATTGGTGCTCTTACAAAGTTACTATGTGGAAGAACGAATTGAAATTATGTATCAAAATAAACATAACGTAAGCTTTAAAGAATTTAAGTGCTAACTTGTTGTTAACAATTAGTTAGCCAGTGGGCTGGTCAGCTAATATTAACGTAGTTCGCTAAACAAACTCATAACCAGTCTTCTATATGCCTAAACGATAATCTGTTCGTCTTAAAAGTAAGTTGTTTTAAATAAAGTAAAAGTCATTGCTTTGGTTTATATCGTTGCTGAACGAGTTTTCGTCATTTGAATAGCTCAACGTTACTCTTATGAACTTTGTTAAATGTTTTTGACTAACGTGCAGGACTAACCAGCAAAATGTCTCTTTTATTTCAGTTTTAATATCACAGAACTGTCAAAATGTCTAGCAAAAGGGCAAAGGGAAAAACCACCAAAAAGCGCCCCCAGCGGGCCACGTCAAATGTGTTTGCCATGTTCGACCAGTCACAGATCCAGGAGTTCAAGGAAGCCTTCAACATGATCGATCAGAACCGTGATGGCTTCATTGATAAGGAGGATCTGCATGATATGTTGGCCTCATTAGGTAAGAACCCCACAGATGAATACCTCGAGGCGATGATGAATGAAGCCCCTGGTCCTATTAACTTCACCATGTTCCTCACAATGTTTGGAGAGAAACTTAATGGAACAGACCCTGAGGATGTCATCAAAAACGCCTTTGCTTGTTTTGATGAGGAGGGGACGGGTTTTATTCAGGAGGACTATCTGAGGGAGCTCTTGACCACTATGGGAGACAGGTTCACAGATGAAGAAGTAGACGAGCTGTTTAGAGAGGCTCCTATTGACAAGAAAGGAAACTTCAACTATGTGGAATTCACACGCATCCTGAAGCATGGCGCTAAAGACAAGGATGATTAGGATGAGGCCGAGCACTACTGAAACTAATGAAAACTACACTGTAATACTACACACATGTTTAATTGTCTCCTTTTCCCCCCACATTCATCCCCACATGGGCTAGTGCAAAGGGATACATTCATCAGCAAGGTGAGATCATTTGACCGTACTGGACCTTCTCGTAAACAGTCTAAGTAAGTAGACTTGTATATAACTATGAAATGCATAAAGACATGTAATCTGTGGTGAACCTCAAACTGAATGAATGCTGTTCTGATATGTAAATGTTGAGAAATAAA

Function

symbol description
myl12.1 Predicted to enable calcium ion binding activity. Orthologous to human MYL12A (myosin light chain 12A).
myl12.2 Predicted to enable calcium ion binding activity. Orthologous to human MYL12A (myosin light chain 12A).
myl9 Predicted to be a structural constituent of muscle. Involved in platelet aggregation. Predicted to be located in cytosol. Predicted to be part of myosin II complex. Implicated in familial hypertrophic cardiomyopathy.
myl12a Predicted to enable calcium ion binding activity; glutamate receptor binding activity; and myosin heavy chain binding activity. Involved in platelet aggregation. Located in extracellular exosome.

GO:

id name namespace
GO:0016459 myosin complex cellular_component

KEGG:

id description
K12755 MYL9; myosin regulatory light chain 9

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11172493_11174547.mRNA True 2117 mRNA 0.36 3 11172215 11175867

Neighbor

gene id symbol gene type direction distance location
CI01000004_11073846_11086948 NA coding downstream 85267 11073679 ~ 11086948 (-)
CI01000004_11052319_11059170 RP1 coding downstream 113045 11051394 ~ 11059170 (-)
CI01000004_11043026_11046108 NA coding downstream 126107 11042880 ~ 11046108 (-)
CI01000004_10944147_11018487 CTNND2B, CTNND2 coding downstream 153728 10942377 ~ 11018487 (-)
CI01000004_10884499_10886045 CBLN2A, CBLN2, CBLN2B coding downstream 286170 10884426 ~ 10886045 (-)
CI01000004_11232801_11249384 NA coding upstream 55576 11231443 ~ 11249384 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 coding upstream 231090 11406957 ~ 11412907 (-)
CI01000004_11454536_11463067 NA coding upstream 278558 11454425 ~ 11464551 (-)
CI01000004_11565906_11578581 MRC1 coding upstream 389118 11564985 ~ 11578946 (-)
CI01000004_11637053_11663228 NA coding upstream 461131 11636998 ~ 11663318 (-)
G31486 NA non-coding downstream 102492 11069225 ~ 11069723 (-)
G31484 NA non-coding downstream 104329 11062670 ~ 11067886 (-)
G31466 NA non-coding downstream 237508 10934298 ~ 10934707 (-)
G31457 NA non-coding downstream 241411 10930308 ~ 10930804 (-)
G31452 NA non-coding downstream 244110 10926284 ~ 10928105 (-)
G31542 NA non-coding upstream 12615 11188482 ~ 11188976 (-)
G31580 NA non-coding upstream 155444 11331311 ~ 11331569 (-)
G32059 NA non-coding upstream 328773 11504640 ~ 11504863 (-)
G32103 NA non-coding upstream 362564 11538431 ~ 11541526 (-)
G32111 NA non-coding upstream 405582 11581449 ~ 11581990 (-)
G31203 NA other downstream 421574 10746437 ~ 10750641 (-)
G30316 NA other downstream 1765294 9377937 ~ 9406921 (-)
G29746 NA other downstream 2814088 8354498 ~ 8358127 (-)
G29656 NA other downstream 3206715 7964364 ~ 7965500 (-)
G29388 NA other downstream 4540308 6631293 ~ 6631907 (-)
G32150 NA other upstream 600652 11776519 ~ 11780951 (-)
G32207 NA other upstream 1200301 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 3374933 14541515 ~ 14551352 (-)
G33746 NA other upstream 3392926 14568793 ~ 14569264 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location