CI01000004_11073846_11086948


Basic Information

Item Value
gene id CI01000004_11073846_11086948
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11073679 ~ 11086948 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11073846_11086948.mRNA
ATGAAGGGGGGTGGTCCACTGCAGAAGGAGGCTTTTGAGAACACTGCATTGTTTTCGGTCATTAGAGTGTCTTTTGTTAGGTTCCTGCTGACCAGAGATGTGAAACTGCCATGGATCAAGAGACACCCCATGGCTTTGGGTCTTTGTGAACATAGTGTACGGCTTTCTCCCTACTTGATGTGGGGGCAGCTACGGCATCTTCTCTTGGCCTGTCGGCACGACGAGGGTTACTTAGCGACAGGAAGTTATGAAAATGAAGACGAGAATGAAAACACGGAGGACAGATCAAAGGATCCCATATACATTCAGAGTAACTCTAATGACCTTCATGGAGATCAATTCAAAAATGGCATGAACCTTAAACCAGCTTCTCCTCTCCTAGAGAGTTCTCGCTTTCTGTTTTTCCTGACCTTTCTGTTTCAAAGTCTCACTGTTAGGAATGAAGACAGAGAAGAGAGGAACCGGAGAGCCTCGTATGATTTTAAAGCAGAGGAGAATGCAGACTTCGAGGAGAGTCCGAAACCGACTGCGGAGGAGATACTCTTGTGGGGGCAATCCTTCGACAAACTGATGCAATGCCCCTCTGGAAGAAGTGCCTTCCGGCAGTTTCTGCGCACCGAGTTCAGTGAGGAAAACATGCTCTTCTGGTTGGCCTGCGAGGAATTCAGTAAGGAAACCAATAAAAGCTCCATCGAAGAGAAGGCGCGGATAATATATGAAGACTACATTTCTATTCTCTCACCCAAAGAGGTGAGCCTCGACTCTAGAGTTCGGGAGGTTATAAACAGGAATATGCTGGAGCCAACATCCCACACGTTCGACGATGCCCAGCTCCAGATCTACACACTAATGCAAAGAGACTCGTATCCGCGGTTCATGAACTCCCCAGTCTACAAAAACCTGCTTAAGACAGTCTCTGAGCAGTCGGTGGAATCTTAGATCTCTGTGATCCCGGTCGAATGCCCCCTCCCTATCTTTTATTTGTTACCTTTCCTTGTGTAGAATATGTTTTAAAGGACCTCAGCGTGGGTCCTCCCAGGGATTTTACTGCTATAGCGATCTGTACCTGAAAAAAGACGCTCAGGTCTCCAGGTCACTGGATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11073846_11086948.mRNA True 1106 mRNA 0.47 7 11073679 11086948

Neighbor

gene id symbol gene type direction distance location
CI01000004_11052319_11059170 RP1 coding downstream 14509 11051394 ~ 11059170 (-)
CI01000004_11043026_11046108 NA coding downstream 27571 11042880 ~ 11046108 (-)
CI01000004_10944147_11018487 CTNND2B, CTNND2 coding downstream 55192 10942377 ~ 11018487 (-)
CI01000004_10884499_10886045 CBLN2A, CBLN2, CBLN2B coding downstream 187634 10884426 ~ 10886045 (-)
CI01000004_10847650_10847940 NA coding downstream 225684 10847557 ~ 10847995 (-)
CI01000004_11172493_11174547 MYL12.2, MYL12.1, MLRN, MYL12A, MYL9 coding upstream 85267 11172215 ~ 11175867 (-)
CI01000004_11232801_11249384 NA coding upstream 144495 11231443 ~ 11249384 (-)
CI01000004_11407198_11412220 ADCYAP1B, ADCYAP1 coding upstream 320009 11406957 ~ 11412907 (-)
CI01000004_11454536_11463067 NA coding upstream 367477 11454425 ~ 11464551 (-)
CI01000004_11565906_11578581 MRC1 coding upstream 478037 11564985 ~ 11578946 (-)
G31486 NA non-coding downstream 3956 11069225 ~ 11069723 (-)
G31484 NA non-coding downstream 5793 11062670 ~ 11067886 (-)
G31466 NA non-coding downstream 138972 10934298 ~ 10934707 (-)
G31457 NA non-coding downstream 142875 10930308 ~ 10930804 (-)
G31452 NA non-coding downstream 145574 10926284 ~ 10928105 (-)
G31542 NA non-coding upstream 101534 11188482 ~ 11188976 (-)
G31580 NA non-coding upstream 244363 11331311 ~ 11331569 (-)
G32059 NA non-coding upstream 417692 11504640 ~ 11504863 (-)
G32103 NA non-coding upstream 451483 11538431 ~ 11541526 (-)
G32111 NA non-coding upstream 494501 11581449 ~ 11581990 (-)
G31203 NA other downstream 323038 10746437 ~ 10750641 (-)
G30316 NA other downstream 1666758 9377937 ~ 9406921 (-)
G29746 NA other downstream 2715552 8354498 ~ 8358127 (-)
G29656 NA other downstream 3108179 7964364 ~ 7965500 (-)
G29388 NA other downstream 4441772 6631293 ~ 6631907 (-)
G32150 NA other upstream 689571 11776519 ~ 11780951 (-)
G32207 NA other upstream 1289220 12376168 ~ 12384780 (-)
CI01000004_14543631_14551256 NA other upstream 3463852 14541515 ~ 14551352 (-)
G33746 NA other upstream 3481845 14568793 ~ 14569264 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location