CI01000004_11181665_11204466 (MYOM1A)


Basic Information

Item Value
gene id CI01000004_11181665_11204466
gene name MYOM1A
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11181665 ~ 11206343 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11181665_11204466.mRNA
GCACAAGATCTCAGGGAAGAAGGAGGAGAAGAAACTGAGCGCACTCTCCAAAAAAGAAAAGCGCTCATACCTGGCAGTGGACAAAGAAGACGAGGTTATTGGATACGTTGTGCCAGTCTTCAGAAGCAGTCATTTGACTACCCAGGATCTGATGGAGACTCAGGAGGAGGTGAAGGAAGAGGGTGTGGGGTATGTCGTCATGAGGAACCTGTTCTCCAGGGAGACCGACTTCAAGATGAGAACTGTGAAGAAGTCCAGAGAGACCAGTATGAGAGAGTCTGCTGAACGCCTGACTCTGAGCAAGAAGATGCATGAGAAACAAGAATTCCAAAAGAAGATGAATCCAGATAGTTTGACTCACCCCCCAGAGTTCATTGTGAAACCACGTGGCCAGACCGTGTGGGAGGGGAAGAGTGTGACGCTGCACTGCACTGTGGCTGGATGGCCCAAACCCCGCGTGGCCTGGTACAAAAACAATGTTTTAATCGATGCTAAGGCTCACCCTGAGAAATACTTCACAGAGAGCCAATACAACATGCATTCTCTGGAAATTAAGAACTGTAGTTTTAGCGACACTGCTGAATACCGGATCTCTGCACTCAACGTGAAGGGAGAAAGTTCTGCATTTGCCCCTGTCATTATTAAAAGATTCAAAGAAGGAGAAGTGGTTGAAAGGCCCCATGGTTACAGCCCTGAATATGGTGTGACCTTCTACACTACTATCATCGACAAGTTTGATGTTTCTTTTGGCCGTGAGGGAGAGACTATGAGTTTGGGCTGTACAGTCATTGTCTACCCCACTGTGAAGCGCTACCAGCCAGAGATAGTGTGGTACAGAAATGGTGTCGTCTTGTCACCTTCTAAGTGGGTGCACATGCACTGGAGTGGTGAGCGAGCCACTTTGACCCTTGTGCATCTGAACAAAGAAGATGAGGGTCTCTACACCCTGCGTGTCAACACCAAGTCAGGCTTTGACACCCACTCTGCCTATGTGTTTGTCAGAGATGCTGATGTGGAGGAGGAGGGGGTTCCTGTTGCTCCTCTTGATGTGCGTTGTCATGACGCTAATAAAGACTATGTGGTTGTTACCTGGAAGCAGCCAGCAGTGGAGGGCAGCAGTTCCATCGTGGGCTACTTCATTGACAGGTTGGAGGTTGGCACTCATCACTGGACCCAGTGTAATGACACTCCGGTGAAGTATGCCCGTTTTCCTGTCACTGGGCTTGTTGAGGGCCGCTCCTACACTTTTAGGGTGCGAGCACTCAACAATGCTGGTGTGAGCCGTCCATCCCGGGCCTCTGACCCCGTAGTTGCCATGGACCCATCAGACCGGGCCCGTCTTAGAGCTGGCCCCTCAGCTCCATGGACTGGAATGATCAAATTCACTGAGGAAGACCCCACAGTGGGTGTGGTGCCTGGTCTACCTACTGACCTGGCTGTCACTGAGGCTACTAAGAGTTACGTGGTTCTTAGCTGGAAACCACCCGTCCAGAGAGGACACGAGGGTGTCATGTATTATGTGGAAAAGTGTTTGGTGGGTACAGATACATGGCAGAGGGTAAACACTGGGATGCCAGTGAAGTCCCCCCGTTTTGCCCTGTTTGACCTTGCTGAGGGCAAATCCTACAGCTTCCGTGTCCGCAGCTGCAACTCTGCTGGAGTTGGAGAGCCATCGGAGGAAACTGGGGCGACTACTGTGGGAGATAGATTGGACCTGCCCTCTGTCCCAGGGCCTGTTGTTCCCATCAGAAACACTGACACTTCTGTGGTTGTGTGCTGGGGGGCATCTAAGGAAGTTAAGAATCTGGTGGGCTATTACATTGAGGTCAGCGTCAATGGCAGCGGTGTGTGGGTTCCTTGCAACAACAAGCCTGTCAAAGGCACCAGGTTTGTGTGCCACGGGCTGAACACTGAGGACAAATGCGTGTTTAGGGTGAAAGCTGTGAACGCTGCAGGATACAGTGGAAGCACTGCCGAATCTGAGACCTGCATTGTGAAAGCGAGCATTGCCGTCCCAAACCCTCCCACCGGTGTGACCCTGCTGGAGAGGGTCCGTGACTACATGGTGCTGGGCTGGCAAGCTCCTGCTAATAATGGTGGAGCAGACATCAGAGGTTACTACCTGGACTACCGAACAGTGAAGGATGGAGTCACAAGCAAGTGGCATGAACTCAACCTCCAGGCAATCACTAGCACATCTTATAAGGTGACAGACCTGAAGGAAAACAAATTCTACCAGTTCCAGGTGCGTGCATTCAATCAGGCTGGTATTAGTGAAGGCTCCAAACCCACTGCCCCCTTGGAGTGCAAGGAATGGACTGTTGCTGTTCCAGGCCCACCTCATAGTCTCCGTGTCCAGGAGGTGCGTAAAGACTCCATGGTCCTTCTGTGGGACCCGCCCACATTCAATGGCCGCAGTCCTGTGACTGGATATTATGTGGACTATAAGGAAGAGAATGGCAAATGGAGATGTGTCCAAGAGAGATCCACAAAACATACTTACATTAAGGTATCTGGTCTCCAAGAGGGTGTTTCATACAGGCTGCGCGTCCATGCTAAGAATCTGGCAGGTGTTGGTGGACCATCAAAGGCAACTGATGCAATTTTGGCTGAGACCCGCCCTGGAACAAATGAGATTGTGGTGGATGTGGATGACGATGGTGTGATCTCTCTGATCTTTGAGTGCTCCGATCTTAAAGAGGACTCTCAGTTTGTGTGGTCTAAAAACTACGAGGCCTTCACTGACACTTCTCGTCTTACCATTCAGACTTCTGGGGGCAAGTCCAGAGCCATCTTTAATGACCCATCATTGGATGACTTGGGCATTTACTCCTGTGTGGTGACCAACACTGATGGTGTCTCTGCCAGCTACAAGCTCACTGAGGAAGGACTTAAACGCTTGTTGGACATCAGCCGTGACCACCAGTTCCCCATAATTCCCTTCAAAAGTGAAATGGCCATTGAGCTGCAGGAGAAGGGCCGTGTGCGCTTCTGGGCCGAAGTTGGCAAGTTCACTTCTAACTGCCAAGTGGAGTATGTCTTCAATGATAACATCATCCATGAAGGAAAGAAGTACACAATGAACTTTAACAAGACAACTGGCATCATTGAGATGTTCATGGACTCACTGGAGATTACTGATGAAGGAACCTTCACATTCAACCTTGTTGATGGCAAAGCAACTGGTCGCACCAGCTTAGTGCTTATCGGAGAAGAGTTTGCCGAGCTTCAGAAGAAATCTGAGTTTGAGAGAGCAGAGTGGGTCAGAAGGCAAGGTCCTCACTTCGTTGAGTACCTTAGTTTCGAGGTCACCCCAGAATGTGATGTGCATCTGAAATGCAAGGTTGGAAACATCAAACCTGCCACTGAGATTGCCTGGTTTAAGGATGGAATTGAGATTGAAGAGGATGATGAGGATGCTAAGAAGATCGGAAAATCTGATGAAGTGTTGACCTTTGACATTGGCAAGCATCTTCCGCAGGAGAAAAGCTTGGCTTTTCGGTCTTTCCTGTTTTGTTTATTTAAATGTTGTTCAAAAATGTTTAACCTTCTGATTCGTATTGATAAAACTAGTGTCCAGTATCTATGTCTGACTGTTCCCACAATTCCCCGACAGATTTCAAAGAAAGATGCAGGAGTATATGAGGTTAAACTGAAGGATGAAAGAGGAAAGGACAAAACTTTGCTGAACCTGACAGATGCAGGTTATCAAGCAGTGCTGAACGAAGTGTTTAGAGTTATTGCCAACTCTTCTACTGAGCTCAAGATTATGAGCACAGAACATGGAATCATTCTCTACTCATTTGTTGTGCACTATATTGAAGATCTCCGTGTTGGATGGCTTCACAAAGAATCAAAGATCTCCCACTCAGACAGAGTGCAGTGTGGAGTCACCGGAGAACAGCTGTGGCTCAAAATTAACGAGCCCACAGAGAAGGATAAGGGCAAATATGCCATTGATATCTTCGATGGCCAAGGCAGCGTCAAGAGAGTTCTTGACCTATCTGGACAAGACCGTGCCCGTGTGGTGGGCGGCCTGCCCGATGTAGTCACTATTCAGGAGGGCAAGTCCCTCAACCTCACTGGCAACGTATGGGGTGATCCTGTTCCTGAAGTCAGCTGGGTGAAGAACGAAAAGCCGCTGGTGTGTGATGAGCACTACACACTGAAGTTTGAGCATGGCAAGTTTGCCAGCATCACCATCGCCGCTGTTTCCACAGCCGACTCTGGGAAATATGCCCTGCTGGTGAAGAACAAGTACGGCACAGAGGCAGCAGAGTTTACTGTCAGTGTCTACATCCCAGAGGATGAAGCGGAGAAGAAGTAGTAAAGACGCACAGAGGGAGAGAGGGTTTTAACAAATGACCAGTATACCTTCCAAGGCATTTTAATTCAAAGCATGCACACACACACAGTGCAAAATTATATGGTTTTACCTTAAAGCAGGGGTGTCCAATCCTGCTCCTGGAGGGCCACTGTCTTGCAAAGTTTGGCTCCAACCCCAATTAAACACACCTGAACCAGCTAATCAAGGTCTTAGGCATACTAAAATCTTCTAGACAGGTGTGTTGAGGCAAGTTGGAGCTAAACTCTGCAGGACAGTGGCCCTTCAGGACCGAGTGTGGACACCCCTGCCTTAAATCAACATGTTTGTGGTTAAAAAGAAATACTCGTAATCGTAAATACTAAATAATGTGGGCCAGTTATGCCTGGTTTTACTTCTGGGCTTTTCACACTATGCTTAACCCTGGGTTAACATCAACATTTTTTAACCCAGAGTTAACTCTACTCTACTGGGTTAAGCAATGTTTCACATTTGTAATTTTGAAAGGAGGTTAGCAAGGATATGAAGCCCTGCTTCAGAAGTCAACCCCAAATTGTGGTTCCAAAAGTGTATCATGTGAATTGCTAACCCAGGTTAATCTATGAACCATGTGAAAATTAACATATTGAGGTGTTAACCTCAAATTATAGTACCAAAGGTATGCAGTCTGAATTTCTAATGTATAAACCTTACAAAATGTAGTTATTTCTTAATCCTGGGTTAACAATTTTAAAGGGTTTAGTTCATCCAAAAATGAAATTTCTGTCATTGGGTACTCACCCTCATGTCGTCCCAAACCTGTAAGACCTTCGTTTGTCTTCAGAACACAAATTAAGATATTTTTGATGAAATTCGAGGGTATCTGATCCACACATAGGCAGCAACGACATTGCACCTTTTGAGGTCCAGAAAGGTAGTAAAGACATCGTTAAAACCGTCGACGTGGCTACAGTGGTTCAACCTTAATATTATGAAGCGTCAAGAATACGTTTTGTGCGCAAAAACATAACAAAAATAACGACTTTACTCAACAAATTCGTCTGTCCCGTCATACTGCTATGCTATTTTTGTTGCAGAGCTTCCGAGTTTACGTCCGAACACGGGCTCAGTATTGGCTGGCTCTGGTCATGTGAGCAGCACGACACATACGCGTGATACTGACACAGGCGTCGGCCAATACCCGCGTTCAGACATAAACACTGAAGCCCTGTAACGAACATAGCGTAGCAGTATGACAGGGGACAGACGAATTTGTTGAATAAAGTCGTTATTTTTGTTTTGTTAAAAAAGTATTCTCGACGCTTCATAATATTAAGGTTGAACCACTGTAGTCACGTCAACGATGTCTTTACTACCTTTCTGGACCTCAAAAGGTGCAATGTCGATGCTGCCTATGTGTGGATCAGATACCCTCGGATTTCATCAAAAATATCTTAATTTGTGTTCTGAAGACAAACAAAGGTCTTACAGGTTTGGGACGACATGAGGGTGAGTAATTAATGACAGAAATTTCATTTTTGGGTGAACTAACCCTTTAAGTGTGCAAAGCCCATTTGACAACTGAAGATATAAGCATCTCATTGCTTTATGCAATTGCAATGTACCTGCAGGTA

Function

symbol description
myom1a Predicted to enable actin filament binding activity and kinase binding activity. Predicted to be involved in muscle contraction. Predicted to be active in M band. Is expressed in musculature system; pectoral fin; and somite. Orthologous to human MYOM1 (myomesin 1).

NR:

description
myomesin-1-like

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11181665_11204466.mRNA False 5937 mRNA 0.47 33 11181665 11206076

Neighbor

gene id symbol gene type direction distance location
CI01000004_11168348_11170417 BAG1 coding upstream 10891 11168348 ~ 11170774 (+)
CI01000004_11163514_11166543 NA coding upstream 15122 11162918 ~ 11166543 (+)
CI01000004_11155692_11159471 OPRK1 coding upstream 21165 11154644 ~ 11160500 (+)
CI01000004_11091985_11100992 ATP6V1H coding upstream 79848 11091680 ~ 11101817 (+)
CI01000004_11062778_11066245 TCEA1 coding upstream 115420 11062193 ~ 11066245 (+)
CI01000004_11215878_11229028 LIPIN2, LPIN2 coding downstream 9606 11215682 ~ 11229122 (+)
CI01000004_11432849_11451784 MGC115231, YES1.L, YES1 coding downstream 226773 11432849 ~ 11452991 (+)
CI01000004_11489380_11502517 COLEC12 coding downstream 283304 11489380 ~ 11502868 (+)
CI01000004_11505808_11516796 STAM coding downstream 299732 11505808 ~ 11518182 (+)
CI01000004_11520078_11522835 NA coding downstream 313851 11519927 ~ 11523093 (+)
G31338 NA non-coding upstream 6441 11172182 ~ 11175224 (+)
G31362 NA non-coding upstream 50720 11129485 ~ 11130945 (+)
G31353 NA non-coding upstream 119742 11061711 ~ 11061923 (+)
G31349 NA non-coding upstream 125602 11055743 ~ 11056063 (+)
G31348 NA non-coding upstream 126628 11054796 ~ 11055037 (+)
G31345 NA non-coding downstream 8705 11214781 ~ 11233117 (+)
G31425 NA non-coding downstream 87824 11293900 ~ 11294132 (+)
G31426 NA non-coding downstream 88283 11294359 ~ 11294617 (+)
G31575 NA non-coding downstream 121042 11327118 ~ 11327423 (+)
G31662 NA non-coding downstream 199088 11405164 ~ 11405756 (+)
G30797 NA other upstream 683877 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 2200681 8976254 ~ 8980984 (+)
G28859 NA other upstream 2582062 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 2730438 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 3525282 7654234 ~ 7656383 (+)
G31710 NA other downstream 431175 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 458697 11666900 ~ 11667659 (+)
G31865 NA other downstream 986054 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 1436678 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 2817471 14035393 ~ 14039142 (+)
G31347 NA non-coding upstream 119426 11053929 ~ 11054130 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location