CI01000004_11168348_11170417 (BAG1)


Basic Information

Item Value
gene id CI01000004_11168348_11170417
gene name BAG1
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 11168348 ~ 11170774 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_11168348_11170417.mRNA
ATGGCGGAGAATACCTTGACAGTGACAGTTGCTTATGGCACGACCAAACACAACATCACTTTAACAGCACAAGATGGACATGAACCACTGTTAAAGGATTTGTGTGATGCGCTGACAGAAGCCACAGGCGTACCAGCACCATCCCAGAAAGTCATATTTAAAGGGAAATCATTGAAGGAGATGGATGAGCCTCTGTCTGGCTTTGGAGTAAAGCAGGGTTGTAAAATGATGATGATTGGAAAGAGGAACAGTCCTGAGGAGGAAGCTGAACTTAAAAAGCTCAAAGACATCGAAAAGTCAGTGGAACAAACTGCCAAGAAGCTTGAGAAGGTGGACGGTGAACTCACAGGACTGAAGAATGGTTTTCTTGCAAAGGAGTTGCAAGCTGAGGCTCTTAATAAACTGGACCACAGAGTGAAAATTGCCTCTGAGCAGTTCATGAAGATCCTTGAGGAAATAGATGCACTGAGCTTGCCTGAGACTTTTAATGACTGCAGGATTAAGAAAAAGGGACTTGTGAAAGCTGTTCAGGGGTTCCTAGCTCAGTGTGACAAAATTGAAGCTGGGATATCAGATCACTTGGCCAAAATTCAGACAAAAAACTTAGCCTTAGCAGAGTGATCGTGAATGAAGACTCCTGACATCAGTAGTTACTGGTGCTGCTCTGTGAGCAACTGAAGAACCTCACTGAGAGCTTTGGCACTGAAGGTGGTCCTGCAGTTCCTACACCCCATGACCTACACATGCACCTGTCATACGGAGAACGGGCGGCATTTGATTACTTATGAGTTTATATTTTTCATGATGTGTTGAATGGGACTGAAGAATTTTGACCATCTGGACCATTCTCTTTTAACTTTGTTACCTAGCCTAAGTTTGACAGATGTTGGATTCATAATCTTTTTTTGATCAAAGAGAAAAAAATAATGGTGCTGGAAGAATGTCTTTAGGACCCAATTAAATGATCTAATTCATCAA

Function

symbol description
bag1 Predicted to enable adenyl-nucleotide exchange factor activity; chaperone binding activity; and heat shock protein binding activity. Predicted to be involved in protein stabilization. Predicted to be active in cytosol; membrane; and nucleus. Human ortholog(s) of this gene implicated in prostate cancer. Orthologous to human BAG1 (BAG cochaperone 1).

GO:

id name namespace
GO:0051087 chaperone binding molecular_function

KEGG:

id description
K09555 BAG1; BCL2-associated athanogene 1

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_11168348_11170417.mRNA True 978 mRNA 0.42 7 11168348 11170774

Neighbor

gene id symbol gene type direction distance location
CI01000004_11163514_11166543 NA coding upstream 1805 11162918 ~ 11166543 (+)
CI01000004_11155692_11159471 OPRK1 coding upstream 7848 11154644 ~ 11160500 (+)
CI01000004_11091985_11100992 ATP6V1H coding upstream 66531 11091680 ~ 11101817 (+)
CI01000004_11062778_11066245 TCEA1 coding upstream 102103 11062193 ~ 11066245 (+)
CI01000004_11048490_11050698 NA coding upstream 117461 11048257 ~ 11050887 (+)
CI01000004_11181665_11204466 MYOM1A coding downstream 10891 11181665 ~ 11206343 (+)
CI01000004_11215878_11229028 LIPIN2, LPIN2 coding downstream 44908 11215682 ~ 11229122 (+)
CI01000004_11432849_11451784 MGC115231, YES1.L, YES1 coding downstream 262075 11432849 ~ 11452991 (+)
CI01000004_11489380_11502517 COLEC12 coding downstream 318606 11489380 ~ 11502868 (+)
CI01000004_11505808_11516796 STAM coding downstream 335034 11505808 ~ 11518182 (+)
G31362 NA non-coding upstream 37403 11129485 ~ 11130945 (+)
G31353 NA non-coding upstream 106425 11061711 ~ 11061923 (+)
G31349 NA non-coding upstream 112285 11055743 ~ 11056063 (+)
G31348 NA non-coding upstream 113311 11054796 ~ 11055037 (+)
G31347 NA non-coding upstream 114218 11053929 ~ 11054130 (+)
G31338 NA non-coding downstream 1408 11172182 ~ 11175224 (+)
G31345 NA non-coding downstream 44007 11214781 ~ 11233117 (+)
G31425 NA non-coding downstream 123126 11293900 ~ 11294132 (+)
G31426 NA non-coding downstream 123585 11294359 ~ 11294617 (+)
G30797 NA other upstream 670560 10497376 ~ 10497788 (+)
CI01000004_08976512_08980033 TTPA other upstream 2187364 8976254 ~ 8980984 (+)
G28859 NA other upstream 2568745 8599235 ~ 8599603 (+)
CI01000004_08414451_08436256 NA other upstream 2717121 8414316 ~ 8439933 (+)
CI01000004_07654234_07655677 MRPL34 other upstream 3511965 7654234 ~ 7656383 (+)
G31710 NA other downstream 466477 11637251 ~ 11642400 (+)
CI01000004_11666900_11667179 NA other downstream 493999 11666900 ~ 11667659 (+)
G31865 NA other downstream 1021356 12192130 ~ 12197418 (+)
CI01000004_12646972_12652534 NA other downstream 1471980 12646838 ~ 12652570 (+)
CI01000004_14036114_14036449 KIAA0040 other downstream 2852773 14035393 ~ 14039142 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015541 bag1 coding NC_007113.7 CM002886.2 30904069 ~ 30908300 (+)