CI01000004_14165407_14171091 (ANKRD45)


Basic Information

Item Value
gene id CI01000004_14165407_14171091
gene name ANKRD45
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14164803 ~ 14171135 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14165407_14171091.mRNA
GTATAAAATGCTTTAAAGAATGTGAAATTCAGCATACAAAGTGGTTAAACCTGTACTCCCTAAACAGGTGTGGCTGAAGTTTCAGGAAGAGAGGAAATCCAACATTATGAGTCGGCAGAAACAAACATAAAGACTGAAACTTCCCCATCATCGGCCTTACAGCTTAAAGAAATAGCATTTCTCTTGGGATCTCTCGCAGTGGAAGACGTCACTTAGACGTCAGGCTGTAATCCAGTGCAGAAGAGTCACTGTAAAGCGGCGGACATCACTGTATTCTCAGGACCCGAAAGCCTTTTACTCATTTCCCGAGCCCAGTCTAACAGGGTTATTTTTAGTGCGCCGTGATTCAGCCATAAGTGCAGTTTGCAGAATTCAGGTCAAGCCGAGGCCGATTACTAATTTCAAGGAAGAAATGTAAAACAGACACGGAAGAATGAGGAATATGGCGTCAGAAACAGATTATTTTAGATTAATAGGGCAGAAGGTCAGCGCTTCATTTAGGATAAGGCAAAATGAAAGTTTTTTCATCCCTGATCGAAGGCCTTTCGTTTATTCGCTCTTAACAGCTTTAGCCTAAATTACATTCTTGGACAGATTGGCAGAAATGGAGCTCGGTGACTCTAATAATGATGTAGAGGGACTTAAGCGTCTTTTGGAAAGCAAGAGGGACACCGATACTCAGGAATCGGAGAATATTTTGTGGGAAAAAGATGAGGTGGGACGAAATGCGCTGTTTACTGCGTGTACCTTAGGACGGAGCGGCATCGTGCACGAGCTCGTGCAGAACGGCGCTGACGCCAATGAATTCACAGCGCGCGGCTACTCACCATTGCATTGTTCTGCCATGTGGGGTCAGCTGGACACTTTGAAAACTTTGGTTGAACTCAACGCTGATTTTCAAGCTACCAATTTCCGTGGAGAGAAGGCTGTTGATGTGGCCCGGCGTTATGACAAACTGGACTGCGCAGAGTATCTGGCATGGGCTGAGGCCAAACAAAGTTTGCAAGCATTAATACAAGAAGTCAGAGACATTTTAGCTGATCAGGAGAAAGTTCAAGGAAAGCTCAGTAAGGAGGACAAGAACGTGTGTATAAACACCTGTTCGGCAAAATCAGACTGGATACACAAAACCAAAAATGCAACAATTCAAGACTTTATTGAACAGAAGAAGCACCTCGAAGACGTACTGGCCCCTATTCTGCTGAAGCTTAACACACAATCTGAAGCCACAACGAAGACAAGAAAGCATTAGAACTACACTGCAAAGAGGCATTAATTTAATGTTGTTCCATAACA

Function

symbol description
ankrd45 Is expressed in several structures, including Kupffer's vesicle; forerunner cell group; liver; nervous system; and pleuroperitoneal region. Orthologous to human ANKRD45 (ankyrin repeat domain 45).

GO:

id name namespace
GO:0005575 cellular_component cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14165407_14171091.mRNA True 1296 mRNA 0.44 6 14164803 14171135

Neighbor

gene id symbol gene type direction distance location
CI01000004_14105873_14111615 PLK3 coding upstream 52098 14105471 ~ 14112705 (+)
CI01000004_14104283_14104432 NA coding upstream 60118 14104283 ~ 14104685 (+)
CI01000004_14101510_14102532 CACYBP coding upstream 61576 14101510 ~ 14103227 (+)
CI01000004_14099120_14100390 MRPS14 coding upstream 64181 14098894 ~ 14100622 (+)
CI01000004_14036114_14036449 KIAA0040 coding upstream 128214 14035393 ~ 14039142 (+)
CI01000004_14172465_14263988 RASAL2 coding downstream 1330 14172465 ~ 14263988 (+)
CI01000004_14266999_14280382 DHX9 coding downstream 95864 14266999 ~ 14280609 (+)
CI01000004_14283392_14361256 LAMC1 coding downstream 111001 14282136 ~ 14363133 (+)
CI01000004_14371097_14380914 NA coding downstream 198926 14370061 ~ 14380914 (+)
CI01000004_14412728_14424282 SMG7 coding downstream 241593 14412728 ~ 14424866 (+)
G33163 NA non-coding upstream 9041 14155491 ~ 14155762 (+)
G33137 NA non-coding upstream 51315 14112989 ~ 14113488 (+)
G33122 NA non-coding upstream 117319 14046584 ~ 14047484 (+)
G33086 NA non-coding upstream 338596 13825980 ~ 13826207 (+)
G33144 NA non-coding downstream 6271 14177406 ~ 14189890 (+)
G33149 NA non-coding downstream 97752 14268887 ~ 14358978 (+)
G33180 NA non-coding downstream 194184 14365319 ~ 14365540 (+)
G33181 NA non-coding downstream 195104 14366239 ~ 14366447 (+)
G33108 NA non-coding downstream 259856 14430991 ~ 14431234 (+)
CI01000004_12646972_12652534 NA other upstream 1509092 12646838 ~ 12652570 (+)
G31865 NA other upstream 1969656 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 2497144 11666900 ~ 11667659 (+)
G31710 NA other upstream 2522403 11637251 ~ 11642400 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 920109 15091200 ~ 15097173 (+)
G34220 NA other downstream 1768222 15939357 ~ 15939950 (+)
G33815 NA other downstream 1892280 16063415 ~ 16066464 (+)
G34400 NA other downstream 2806193 16971995 ~ 17025976 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015624 ankrd45 coding NC_007113.7 CM002886.2 35615547 ~ 35731776 (+)