Gene
RNA
| Item | Value |
|---|---|
| gene id | CI01000004_14101510_14102532 |
| gene name | CACYBP |
| gene type | coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 14101510 ~ 14103227 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| symbol | description |
|---|---|
| cacybp | Predicted to enable S100 protein binding activity; tubulin binding activity; and ubiquitin protein ligase binding activity. Predicted to be involved in heart development. Predicted to be located in cytoplasm. Predicted to be active in nucleus. Orthologous to human CACYBP (calcyclin binding protein). |
| id | description |
|---|---|
| K04507 | CACYBP, SIP; calcyclin binding protein |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| CI01000004_14101510_14102532.mRNA | True | 1226 | mRNA | 0.36 | 4 | 14101510 | 14103227 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_14099120_14100390 | MRPS14 | coding | upstream | 888 | 14098894 ~ 14100622 (+) |
| CI01000004_14036114_14036449 | KIAA0040 | coding | upstream | 64921 | 14035393 ~ 14039142 (+) |
| CI01000004_13959453_14004808 | TNR | coding | upstream | 96702 | 13959453 ~ 14004808 (+) |
| CI01000004_13785437_13800307 | RFWD2.L, RFWD2 | coding | upstream | 301203 | 13784816 ~ 13800307 (+) |
| CI01000004_13708254_13713625 | NA | coding | upstream | 387331 | 13707887 ~ 13714179 (+) |
| CI01000004_14104283_14104432 | NA | coding | downstream | 1056 | 14104283 ~ 14104685 (+) |
| CI01000004_14105873_14111615 | PLK3 | coding | downstream | 2244 | 14105471 ~ 14112705 (+) |
| CI01000004_14165407_14171091 | ANKRD45 | coding | downstream | 61576 | 14164803 ~ 14171135 (+) |
| CI01000004_14172465_14263988 | RASAL2 | coding | downstream | 69238 | 14172465 ~ 14263988 (+) |
| CI01000004_14266999_14280382 | DHX9 | coding | downstream | 163772 | 14266999 ~ 14280609 (+) |
| G33122 | NA | non-coding | upstream | 54026 | 14046584 ~ 14047484 (+) |
| G33086 | NA | non-coding | upstream | 275303 | 13825980 ~ 13826207 (+) |
| G33077 | NA | non-coding | upstream | 322442 | 13778766 ~ 13779068 (+) |
| G32959 | NA | non-coding | upstream | 348657 | 13651058 ~ 13752853 (+) |
| G33137 | NA | non-coding | downstream | 9762 | 14112989 ~ 14113488 (+) |
| G33163 | NA | non-coding | downstream | 52264 | 14155491 ~ 14155762 (+) |
| G33150 | NA | non-coding | downstream | 60992 | 14164219 ~ 14201867 (+) |
| G33144 | NA | non-coding | downstream | 74179 | 14177406 ~ 14189890 (+) |
| G33149 | NA | non-coding | downstream | 165660 | 14268887 ~ 14358978 (+) |
| CI01000004_12646972_12652534 | NA | other | upstream | 1445799 | 12646838 ~ 12652570 (+) |
| G31865 | NA | other | upstream | 1906363 | 12192130 ~ 12197418 (+) |
| CI01000004_11666900_11667179 | NA | other | upstream | 2433851 | 11666900 ~ 11667659 (+) |
| G31710 | NA | other | upstream | 2459110 | 11637251 ~ 11642400 (+) |
| CI01000004_15091390_15096502 | GA45B, GADD45B, GADD45BB | other | downstream | 988017 | 15091200 ~ 15097173 (+) |
| G34220 | NA | other | downstream | 1836130 | 15939357 ~ 15939950 (+) |
| G33815 | NA | other | downstream | 1960188 | 16063415 ~ 16066464 (+) |
| G34400 | NA | other | downstream | 2874101 | 16971995 ~ 17025976 (+) |
| species | gene id | symbol | gene type | chromosome | NCBI id | location |
|---|---|---|---|---|---|---|
| zebrafish (Danio rerio) | XLOC_015621 | cacybp | coding | NC_007113.7 | CM002886.2 | 35595454 ~ 35601370 (+) |
