G32959


Basic Information

Item Value
gene id G32959
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 13651058 ~ 13752853 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU37367
CTTCTATAGAAATTAATTGAAAACACTCACTCTGCTCAGCACCGTTATGAATGACCATGCGGTCGTGTACATTTTTACTTTGTTTGTTTATTATATTAATATGTTTCAGCACATTACAATCATTATATGGCTTTAGTTAAGATAGCCTGTTCCCTAATGAATTAAACAGTTTGTTATCATTCAGATTGAAAGTGTGAATGTGTGTGTAGCCTATACAGTACATGCATGCATGCGGGGTAGGGGTGCGATTTTCGAATAATAATCGAATAATTCCCAGTGATCACTGAATATTATTTTTCCTTGAAATGCCCATCCCTAGTTTATACATGAGGCTCCATGTCTTTTTACTCTTCAAACAGTTATTCACACATTTGTTTTTCTTCTCTTATATCTGTCTGGTGTTTTGCTTTCTTGCTATACAGATTGTTTCACAAAGTTTCCAGCCGAGAGTGTTTGGTAACTGCTCTTTAATGTTTGATCACAGTGATCTTACTCAATGCCCAAAATCCATCTTTGCCATTCCTGTTTTTCTTCTTGACAAGGCCTGACACATAAACAGACTTGGAAACCGTCCATACAAAATCAGAACATTGACCATAACTTTTGCTCAACTGTATTTCCTGGCTATAAAGTTCACATCATCCTCAGCAGTTTTCCTCACCGGCACAACTGAAATAGGTTGCAGGGGTGAATATATCAGCATCTGAAATGTTTGCATGGAAACATTTTTTTTAAACCACCATGCTACGCTAATTCCATGCCGTTGCTTATCTCTTTGGAAAGCACTCGTGGCTGGTGCAGTGGGTATCAGCTGCTAAGCAGAGGCATTAAAAGATTTTCCCTCTGGCTGCTTTAACTGTTTGTCATTTGACATTTTTGTACCCTACAGTTTGTTAGGCGACGCATATTAATTAGAAATTTCACCCCGGCCATAATTGATGTCGCCGAATCTTTGTACCGAAAAGTCAATCCAAATTAGCAGCTACAGAAGTGAAGATGAATTGATGTTGAATGAGCAATTGGCAGCATAGAGCCTTTATGAGCACATTGAAATCGAGAGACGAGTTTGAGGAAAGCATAGCTGCTTAGTAAACATCACTCAGTCCTCTCAGGCTTGGCTTACGGTTTTTATATTCTCGCTGTCCAGTTCCGGCATGGTTAAGGACAGTCTCTTGCCAGAGGGCAAGGTTAGTTCGTTCTAGGTTGGAAACCAAATCTCATTGTGTGTGTAGGGAGATATTTCTGCCCTGCTTTTAGTCCCTCAGGAGTTCAGTCAAACTCTATTGCCTCTGCGTACATTCTATCACGTAGCCCCCAGCGCCCATCTGCCAGCAGCACATCTTTATGCTGGAGAGATGTGGATTTGAGCTGTGCTCTGATAAAAGAAAACCTAGGGAAGTACGATATCCACCCCACCACCTCGTGTGCTGTCTGGATGAACTGTGTGTATAAGTATGTGTTTGCCAACTTAAGTAAAATAAGAGGTACTTTCCTTTTCTTAATACCAGTCATTTGAGATTTCAGTAAACCATTGGTGCTGGTGACAATTGACTGCGTGGTTTAAAAAAAAGAAAAAAAGAAAAGAGCTAGACAGTCACAGTGTATGCCTGAAGCATAAGTATGTGTATGAAAAAGATAGTCACTGCTTGACTGACTTACGTGCTAAAATGCATTTGAGATGCAATCACTTTGATTTTGGCTTACTGACGTACAACTCCATGGCATCTGTTATAAAAATAAATTAATTTGAATGTCATACTTGTGTTACACACCATTACACACATTTCAATTTAGTTTCTACCAAATTATAACACTTGAGAACAGTGACTAAATAAATATTTCAAGATTAACATTTAACTTTTAAGTGCTTTGTATTTTAAAACATTTAATCAACACTGACTGCAATTGTCTTTATATTTCTCCATTTAGACAGACGAACGGCGTTTCGCATAGATTGAATATGAGATGGGATGATTCTGTATTAGATTAGAAGGTTGGCAACTGTAGCCTAGTAGCTTTTGAATGCAACAAATATAAAAACCTTTTTGCAGTTCTAGTTGCAAAAATATTGTTTAAAAGTAGATAAGCCAAGGAAAACGAAAGTTTAAGCCTTGACAATTTAAATATTCAAGCGCAAGAAGACGCAATAGGGAGCTCATTTTGTTACATAACCGAAGCGCACACCCAGATAACGCGCAAATACTAAACTGAGCTCTCTTGCATGTCTTCTTGCGCTTGAGCAGACAAATTCACACAAAATTATGTCAAAAAATAGCAAATATCTAAGTAAACATAGTCGGTTATGTCTTAAGTGAACGTAGACAGTTGATAAAGTAAACACGTGTACAGTATCAGTATATTAGATCCGTGCATTCGTTCTTAAAGTGACAGCAGCCTAATATTCCTTCTGTCTGTGTTTTTAATGTTAATAAAAAAAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU37367 True 2439 lncRNA 0.38 2 13651058 13752853

Neighbor

gene id symbol gene type direction distance location
CI01000004_13467845_13475703 NA coding upstream 174854 13467845 ~ 13476204 (+)
CI01000004_13211489_13233786 DARS2 coding upstream 416864 13211489 ~ 13234194 (+)
CI01000004_13197104_13205895 KLHL20 coding upstream 444473 13197104 ~ 13206585 (+)
CI01000004_13062721_13076100 KIF2C coding upstream 574830 13062721 ~ 13076228 (+)
CI01000004_13043279_13051835 NA coding upstream 599094 13043237 ~ 13051964 (+)
CI01000004_13785437_13800307 RFWD2.L, RFWD2 coding downstream 31963 13784816 ~ 13800307 (+)
CI01000004_13959453_14004808 TNR coding downstream 206600 13959453 ~ 14004808 (+)
CI01000004_14036114_14036449 KIAA0040 coding downstream 282540 14035393 ~ 14039142 (+)
CI01000004_14099120_14100390 MRPS14 coding downstream 346041 14098894 ~ 14100622 (+)
CI01000004_14101510_14102532 CACYBP coding downstream 348657 14101510 ~ 14103227 (+)
G33029 NA non-coding upstream 107979 13540593 ~ 13543079 (+)
G32927 NA non-coding upstream 319674 13331184 ~ 13331384 (+)
G32926 NA non-coding upstream 321508 13329314 ~ 13329550 (+)
G32894 NA non-coding upstream 393836 13256930 ~ 13257222 (+)
G32599 NA non-coding upstream 418107 13231587 ~ 13232951 (+)
G33077 NA non-coding downstream 25913 13778766 ~ 13779068 (+)
G33086 NA non-coding downstream 73127 13825980 ~ 13826207 (+)
G33122 NA non-coding downstream 293731 14046584 ~ 14047484 (+)
G33137 NA non-coding downstream 360136 14112989 ~ 14113488 (+)
CI01000004_12646972_12652534 NA other upstream 995347 12646838 ~ 12652570 (+)
G31865 NA other upstream 1455911 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 1983399 11666900 ~ 11667659 (+)
G31710 NA other upstream 2008658 11637251 ~ 11642400 (+)
G30797 NA other upstream 3153270 10497376 ~ 10497788 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 1338391 15091200 ~ 15097173 (+)
G34220 NA other downstream 2186504 15939357 ~ 15939950 (+)
G33815 NA other downstream 2310562 16063415 ~ 16066464 (+)
G34400 NA other downstream 3224475 16971995 ~ 17025976 (+)

Expression


Co-expression Network