CI01000004_14371097_14380914


Basic Information

Item Value
gene id CI01000004_14371097_14380914
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14370061 ~ 14380914 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14371097_14380914.mRNA
TTATATATAGACCCATATATTACCTCAAAAACATACTTGAAAACTCTTTTGAAAATAAGAATTAAGTTTTGTACACACATATTAAAGTTTTTTTTAGTACTTAAAGGTAGGGTAGGCAATTTCGGAGAGGCTAGCAATAACAAGCTAGCTTTGAAAGCATGAGATCCCGCCTTCCCTTCAGAGCATCTCCAAAGCCACGCCTCCTCCAAAACACATGAACGCGCACAGCAGAGTCTGCATTCTGCAAAGCGTCACGAGACGAGAGACGGCGTAAAATTACCTCATGTCACAAAGCACATAACATTACAATAATAATCAACGTAAACAACTTGCAGAGCTCTTGTACCACCTGACTGCTGCAGATTCATTTCTGCGTTGATAATGTTGACGTAGAAACACATAAATCCAAGTCTGAGGACATCTCGGTTTGCCATCTCGTAATTACGGACCGAATGCAGTGATTGGACGAACATTTTTTGGTCCTGAGACTCCCACAGAAGATATATGTACATGTTTTAATATTTAGACCACTAAATTATAGCCTACTTTTATTCAATTTGTATCTTCTGCTGCTTGTTGCATTGTCACTTTATTAATAACAATATAGTCCTACTATAGATCTTGCATATTAAGCAAAACAGAGCACAGCCTCAAGCATTAATACATTTAATACCATAGTGCACACTTAGATCTAAATAATCTCAGCATTTATGAACAATGGGTTTAATTGTTCTCGTTCAGGACTTCTGGTAGCTAGGCATTTAATCAAACACGTCTTTATGTGAGGAATGGCATGATACATTTCCTATCAGTCTGTGAATCACTCATGAGTAAATATACAATTGAGACACGGAGCTTGACGTGCCCGCGCTTGTCAGGTTGAAAGTTTTTAAGTGCCCGCGCAAGGATCAGCTGGCACAACCATTAGGTGTCCGTCTCGCACTGAGGACTAAACAGACAGACAGTATCCTTAATACCGACCAGACAACATAAAAGAGAGAACGTGCCGTTAAATCTTATTTCTTGGATGTGGAAAATGAAGAGCAGTTGGATCTTTCTGTGCGCAGTTTGCATCTGGTATCCAGTTCACGGGACAGTTCAATCCTCCAGTGTTTGTTCATGTCATGGGAAAGCACAGTACTGCAGAGCAGATCGTCTAGGATTGTACTGTATAAACTGCCAGGGAAACACCGAAGGGCGTCACTGTGAAAAATGCAAGGAAGGATACTACCACCAGAGGGCAGGAGACAACTGTGTGGCTTGCAACTGCAACACCGCAGGTTCTCAAGGACCAGTCTGCAACAATGAGGGACGGTGTACGTGTAAACAGGGAATTTATGGAGACAAGTGTGACCGCTGTCAAGATGGCTCTCAAGTGACTCCCAGTGGATGTGAGCATTTGAGGCTAAGCTGTCGGTCACGTAAAAATGGCCGTCTTACGTATAATACAGAGGAGTGTCTGCCCTGCTTTTGCAATGGCCATTCAAGTGTGTGCTCCTCAGCTGAGGGATATTCCATTCACAACATCACTTCAACTTTTGACAATGGACCTGAAGGCTGGAGGGCGGCCACTGCTCAAGGAGTGAGCCCTTCACAAGTGCAATTCAGGTGGTCTCCCACTCACAAAGACCTTGAGGTTATCTCTAAGGAGATCCTTCCTGTTTATCTGTTTGCTCCCGCATCTTACCTGGGGAATCAGGCTTTGAGCTACGGTCAGACGCTCACCTTCTCTCTGCGTCTGGACAGAGGTGTCCGTCATCCTTCCATCTCTGATGTCATGCTGGAAGGAGCAGGTCTTAAGGTGTCTGCTTCACTAGGGGACTTGAGAACTGTGGTGCCCTGTGGCAAGAAAATCACCTACACATTCAAACTGGACGAGCAGCCTGGCAGCAAATGGAAACCGCAGCTCTCATCCACGGAATTTCAAACACTTCTGAGCAATCTTACAGCCATTAAAATCAGAGGAACATTTGGTGAAAATGGACGTGGGTATCTGGATGACGTCTCTCTGGTGTCAGCTAAACTGGGTCCCGGCACCCCTGCAGTCTGGGTAGAAAAGTGCAGATGCCCTACTGGTTATGATGGACAGTTTTGTGAGCGCTGTGCCACTGGATACAGGAGGCGTTTCCCTGGTCAAGGCCCCCGAAGCCCCTGTGATCCCTGCTCCTGTCAGGGTGGAACATGTGATCCAGAAACAGGAGGCTGTTACTCGGCTGATGAGATACCAAATCTGCAGATGTGTCCTAAAGGTTATTATGTAAACCGCCAACAGCCCAACTCCTGCCAGAAGTGTCCGTGTCCCGAGGGTGAGGGTTGCTATGTTATTCCAGGAACCCAGGATGTGGTGTGTGCCCGCTGTCCCCGGGGGACTACAGGCTCTCGTTGTGAAATATGTGATGACGGTTTCTATGGAGACCCCCTGGGAGAGTACGGCCCTCCCAAACAGTGCCAGCCCTGCCAGTGTTACGGTCACGTGGACCAGAACGCCGTCGGCAACTGTGACCGCCGAACAGGGGAGTGTCGGAAGTGCCTGGACCACAGCACCGGCCCCCAGTGTGAGAACTGTGAAGATGGATACCACCACATTTACCCCACAGACCCCTGTCAGGCCTGTAACTGCAATCGTCTGGGCTCTGTGTCAAATTCATGCAGTGATAAAGGCCAGTGCAAGTGTAAGGAAGGTTACGATGGACTCAAGTGTGAGAAATCAACGTGTCCATCCTGCTTTAACCCAGTCAAGAGCAAGATTGAGGTTTATGCACGACAGCTGGAGGAAATGGAGGATTTATTTAAAGGAATTGGAGGTGATGATGCTCCAATCAACGATGCTCAGACGGAACGGGCTATCAGGGCCGCAGAAGTCATGGTGCAAACCCTGAAAATCAGAGCAAATGAACTCACAAATACAGAGAGACAGCTTCAGGATAAACTGGTGAGCATCAGCCGATCCCAACTGAGAGAGGACAGAAACATGGAGGCTTTGTTGACAACAGTGGATGGGATCAGAAACAAGGATCAGCAGTACAGAACGGAAGTTTCAGAAATCCGTAAACTCATCGGTGACATCAGGTTAAAACTGCAACAGGCCAAACGGGACATCCAACAAGCTGAGTTTCCCTCAGGTGATGCGGTGCCAGGTGCTGACACCTTGTCTGATTTGGTTCTGAGAGCTGCTGATCTTGCTGAGCA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14371097_14380914.mRNA True 3189 mRNA 0.47 14 14370061 14380914

Neighbor

gene id symbol gene type direction distance location
CI01000004_14283392_14361256 LAMC1 coding upstream 6928 14282136 ~ 14363133 (+)
CI01000004_14266999_14280382 DHX9 coding upstream 89452 14266999 ~ 14280609 (+)
CI01000004_14172465_14263988 RASAL2 coding upstream 106073 14172465 ~ 14263988 (+)
CI01000004_14165407_14171091 ANKRD45 coding upstream 198926 14164803 ~ 14171135 (+)
CI01000004_14105873_14111615 PLK3 coding upstream 257356 14105471 ~ 14112705 (+)
CI01000004_14412728_14424282 SMG7 coding downstream 31814 14412728 ~ 14424866 (+)
CI01000004_14448323_14458776 NA coding downstream 65591 14446505 ~ 14459181 (+)
CI01000004_14498216_14504721 NA coding downstream 117140 14498054 ~ 14505155 (+)
CI01000004_14507781_14513019 NA coding downstream 125646 14506560 ~ 14513444 (+)
CI01000004_14864427_14865483 ING5B, ING5, ING5.L coding downstream 483184 14864098 ~ 14865753 (+)
G33181 NA non-coding upstream 3614 14366239 ~ 14366447 (+)
G33180 NA non-coding upstream 4521 14365319 ~ 14365540 (+)
G33149 NA non-coding upstream 11083 14268887 ~ 14358978 (+)
G33150 NA non-coding upstream 168194 14164219 ~ 14201867 (+)
G33144 NA non-coding upstream 180171 14177406 ~ 14189890 (+)
G33108 NA non-coding downstream 50077 14430991 ~ 14431234 (+)
G33096 NA non-coding downstream 82292 14463206 ~ 14473902 (+)
G33644 NA non-coding downstream 147616 14528530 ~ 14528781 (+)
G33662 NA non-coding downstream 154164 14535078 ~ 14535344 (+)
G33919 NA non-coding downstream 377218 14758132 ~ 14792115 (+)
CI01000004_14036114_14036449 KIAA0040 other upstream 333161 14035393 ~ 14039142 (+)
CI01000004_12646972_12652534 NA other upstream 1714350 12646838 ~ 12652570 (+)
G31865 NA other upstream 2174914 12192130 ~ 12197418 (+)
CI01000004_11666900_11667179 NA other upstream 2702402 11666900 ~ 11667659 (+)
G31710 NA other upstream 2727661 11637251 ~ 11642400 (+)
CI01000004_15091390_15096502 GA45B, GADD45B, GADD45BB other downstream 710330 15091200 ~ 15097173 (+)
G34220 NA other downstream 1558443 15939357 ~ 15939950 (+)
G33815 NA other downstream 1682501 16063415 ~ 16066464 (+)
G34400 NA other downstream 2596414 16971995 ~ 17025976 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
zebrafish (Danio rerio) XLOC_015629 lamc2 coding NC_007113.7 CM002886.2 35991137 ~ 36001985 (+)