CI01000004_14770317_14773615


Basic Information

Item Value
gene id CI01000004_14770317_14773615
gene name NA
gene type misc
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 14770286 ~ 14774000 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000004_14770317_14773615.mRNA
AGAAGCATATCAGTAATAAGCAATAAAGTGCTCTTTGTGGGGAACCATGAAGAATTTAAAGTTCAAGATGATCCTGCAAGATGTGAAACTGCAAAGTTCTACTCAAGCAGAGCATATATTTTCATTTAGTTTATTTTTATTTCTTCAGCTTTTTGGAGTACAGTTTTATATGATCCAGAATGTGCCGGTGTGTTTGGGTTTTTAACCAGCACATATAGGTCCCCATCACACACTTTCTGATTTCTTTCTTTCAAGGCTCTTGAGTTTGTGTTCAAAACTGTCACTTCCAACCAATCACCTGCATCTGAACCAAAGATGAAGACACTGAAGACACACCTCTTCTGTGAGCTCTGAACTAAAGCATTAGCATCGGAGCACAGAGAACATGAACAGATCTGTAGAAAACATGGAAAAACACCTGTTTCTGATTTTATTTCTGACTTCAGGTGTGATGACTGCAGACAAGATTTGGCCAAATAAAGAAACTAGCGTTATAAAGAAGGAAGACGAGACTGTGACCCTCAGCTGCTCATATGAAACAGACAGCAGTTATGTCAGACTTTACTGGTACAGACAGTATCCTAATAGTGAACCTCAGTATTTAATATTTAAACCTGCCCGATCAGCTACTGTAACTGGGAACCCCTCTGATCCTCGCTTTCAGTCGACTGCATTACAAACATCCACTGAACTCAAGATTAATGGAGTAACTCTGTCAGATTCAGCTCTCTATTATTGTGTGAGTTTTGGAGATGAAATCACACCAGACAGCACTGAAGAGTCTGCTGCAGAGGGTTCAACTGTTACATTATCCTGCAGTTATTCATCTGCAGATTCACTTCTCTGGTACTGTCAGTATCTCGGATCAGCTCCTCAATTACTTGTGCTTAAAAAAGAGAGTGTGAAAGAGGCTTCTGAGGTAGATGGCAGGTTCTCTACTAAGACCAGAAAAGAAAAACAAGCCACAAAAGAGATCAAACCAATGGAAAAATGGATGATTAGTACTCTTTTCCTCACAGCACAGATTTTTGGATGTGATTCTCTGGACAGCGTTGAACAAAATCCAGGAGTTCAAACTGCTGTTGAAGGTGCAGCTGTAACAATCAACTGTCAATATGAAACCACTGATGTTTCACCATATCTCTTCTGGTACCAGCAAAAAGTGAATGGATTTCCAGAATACATGCTGGGCAGATTTGGTACGAATGATAAGCAGTTCGAGGATAGATTTAGCAGCAATCTCAACACAACTATAAAATCATTTCCATTGACAATCCAGGATCTGCGTGTGTCAGACTCTGCTCTGTCTTACTGTGCTCTGAGGCCCACAGTCACAGGAAACACAAGAACACTGTACAAAAACCTGACAAAACTGAAGATGTACAACTAATTTCCTTCCATAAAAATCTATTTGAATTAAA

Function

NR:

description
T cell receptor V alpha chain, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000004_14770317_14773615.mRNA False 1421 mRNA 0.40 5 14770286 14774000

Neighbor

gene id symbol gene type direction distance location
CI01000004_14758580_14768474 NA coding downstream 1606 14758528 ~ 14768680 (-)
CI01000004_14756092_14758171 NA coding downstream 12049 14755814 ~ 14758237 (-)
CI01000004_14754775_14755334 NA coding downstream 14537 14754747 ~ 14755749 (-)
CI01000004_14749034_14751685 NA coding downstream 16690 14748304 ~ 14753596 (-)
CI01000004_14742838_14744316 NA coding downstream 25779 14742807 ~ 14744507 (-)
CI01000004_14775109_14792782 NA coding upstream 284 14774282 ~ 14792784 (-)
CI01000004_14794085_14794548 NA coding upstream 20032 14794032 ~ 14794593 (-)
CI01000004_14802126_14805324 NA coding upstream 27301 14801301 ~ 14805738 (-)
CI01000004_14808034_14808645 NA coding upstream 33938 14807938 ~ 14808969 (-)
CI01000004_14809409_14811408 NA coding upstream 35223 14809223 ~ 14811709 (-)
G34479 NA non-coding downstream 63166 14706723 ~ 14707120 (-)
G34461 NA non-coding downstream 76968 14687437 ~ 14693318 (-)
G34478 NA non-coding upstream 32001 14806001 ~ 14806506 (-)
CI01000004_14815294_14818132 NA non-coding upstream 43726 14815142 ~ 14821516 (-)
G34474 NA non-coding upstream 63689 14837689 ~ 14838322 (-)
G34468 NA non-coding upstream 111825 14885825 ~ 14888056 (-)
CI01000004_14676793_14679785 NA other downstream 90579 14676422 ~ 14679856 (-)
CI01000004_14827536_14831360 NA other upstream 53630 14827496 ~ 14831526 (-)
G34632 NA other upstream 237361 15011361 ~ 15025221 (-)
G34668 NA other upstream 277176 15051176 ~ 15052775 (-)

Expression


Co-expression Network