G27009


Basic Information

Item Value
gene id G27009
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000004
NCBI id null
chromosome length 17451736
location 4037923 ~ 4038148 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU30482
AACAAAACGGTATGTTATACAGTGTACACTACAGTACATGTTTTCATATCACTATAAAGTAATTAGTTTGTTGACTAGATGCTGCATTAGTGGAGAACAGTAGTATGTTTGCCGTCGAGGCTGAGAGGATGCTAACATTATTAGTAGTACCTCAAGCGGTTAAAACAATGTGACAAAAACAACTGTTTAATGTCACGATTGTTACCATTCATTTGCATTAGTTTAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU30482 True 226 lncRNA 0.37 1 4037923 4038148

Neighbor

gene id symbol gene type direction distance location
CI01000004_03934726_03935639 NA coding upstream 102053 3933685 ~ 3935870 (+)
CI01000004_03878083_03909016 NA coding upstream 128614 3878019 ~ 3909309 (+)
CI01000004_03814120_03839793 NA coding upstream 198116 3814051 ~ 3839807 (+)
CI01000004_03735876_03736152 NA coding upstream 300906 3735754 ~ 3737017 (+)
CI01000004_03592655_03592917 NA coding upstream 445006 3592655 ~ 3592917 (+)
CI01000004_04048829_04053849 NA coding downstream 7780 4045928 ~ 4054570 (+)
CI01000004_04123289_04123846 NA coding downstream 84476 4122624 ~ 4123963 (+)
CI01000004_04172679_04173047 PBX1 coding downstream 133506 4171654 ~ 4174352 (+)
CI01000004_04231304_04239652 NA coding downstream 193063 4231211 ~ 4240123 (+)
CI01000004_04315741_04317415 GLULB, GLULA, GLNA, GS02, GLUL, GS01, GS04 coding downstream 276628 4314776 ~ 4317616 (+)
G27008 NA non-coding upstream 1401 4036247 ~ 4036522 (+)
G26525 NA non-coding upstream 44997 3992653 ~ 3992926 (+)
G26522 NA non-coding upstream 49043 3988528 ~ 3988880 (+)
G26517 NA non-coding upstream 74084 3963549 ~ 3963839 (+)
G26513 NA non-coding upstream 77382 3960319 ~ 3960541 (+)
G27010 NA non-coding downstream 135 4038283 ~ 4038550 (+)
G27013 NA non-coding downstream 4682 4042830 ~ 4043074 (+)
G27018 NA non-coding downstream 21769 4059917 ~ 4060234 (+)
G27020 NA non-coding downstream 25249 4063397 ~ 4072269 (+)
G27022 NA non-coding downstream 38954 4077102 ~ 4077398 (+)
CI01000004_03550525_03552621 PTGER4C other upstream 485477 3550329 ~ 3553423 (+)
G26245 NA other upstream 515530 3509017 ~ 3522393 (+)
CI01000004_02745885_02768971 NA other upstream 1278985 2745885 ~ 2769135 (+)
G25992 NA other upstream 1301155 2736536 ~ 2736768 (+)
G25882 NA other upstream 1464874 2548075 ~ 2573049 (+)
G27805 NA other downstream 1334677 5372825 ~ 5373803 (+)
G28165 NA other downstream 1694441 5732589 ~ 5733001 (+)
G28302 NA other downstream 2431880 6470028 ~ 6502087 (+)
CI01000004_06571261_06572539 SEP15 other downstream 2533072 6570771 ~ 6572667 (+)
CI01000004_07654234_07655677 MRPL34 other downstream 3616624 7654234 ~ 7656383 (+)

Expression


Co-expression Network