Gene
RNA
| Item | Value |
|---|---|
| gene id | G27443 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 4168834 ~ 4169180 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU30985 | True | 347 | lncRNA | 0.45 | 1 | 4168834 | 4169180 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_04062573_04103207 | NA | coding | downstream | 65473 | 4061197 ~ 4103361 (-) |
| CI01000004_03802203_03806124 | NA | coding | downstream | 361663 | 3801136 ~ 3807171 (-) |
| CI01000004_03737431_03794978 | PTPRFB, PTPRF | coding | downstream | 373384 | 3737370 ~ 3795450 (-) |
| CI01000004_03705008_03734116 | NA | coding | downstream | 433340 | 3704143 ~ 3735494 (-) |
| CI01000004_03681226_03695729 | KDM4AB, KDM4A | coding | downstream | 472281 | 3681108 ~ 3696553 (-) |
| CI01000004_04177460_04183900 | PBX1A, PBX1B, PBX1 | coding | upstream | 8280 | 4177460 ~ 4183993 (-) |
| CI01000004_04241031_04243866 | PBX1A | coding | upstream | 71062 | 4240242 ~ 4244611 (-) |
| CI01000004_04267237_04294023 | NA | coding | upstream | 97546 | 4266726 ~ 4294110 (-) |
| CI01000004_04361874_04362518 | NA | coding | upstream | 192481 | 4361661 ~ 4362716 (-) |
| CI01000004_04375211_04379590 | NA | coding | upstream | 205930 | 4375110 ~ 4379590 (-) |
| G27461 | NA | non-coding | downstream | 9257 | 4159296 ~ 4159577 (-) |
| G27458 | NA | non-coding | downstream | 12909 | 4155509 ~ 4155925 (-) |
| G27456 | NA | non-coding | downstream | 14455 | 4154152 ~ 4154379 (-) |
| G27425 | NA | non-coding | downstream | 69296 | 4099220 ~ 4099538 (-) |
| G27440 | NA | non-coding | upstream | 67214 | 4236394 ~ 4238592 (-) |
| G27438 | NA | non-coding | upstream | 95879 | 4265059 ~ 4318197 (-) |
| G27504 | NA | non-coding | upstream | 150055 | 4319235 ~ 4319490 (-) |
| G27505 | NA | non-coding | upstream | 153915 | 4323095 ~ 4323350 (-) |
| G27511 | NA | non-coding | upstream | 165926 | 4335106 ~ 4335436 (-) |
| G26788 | NA | other | downstream | 893113 | 3267683 ~ 3275721 (-) |
| CI01000004_01773383_01774888 | INSL5B | other | downstream | 2393893 | 1772928 ~ 1774942 (-) |
| G27746 | NA | other | upstream | 1009047 | 5178227 ~ 5203724 (-) |
| CI01000004_05617072_05627369 | NA | other | upstream | 1451203 | 5616644 ~ 5628289 (-) |
| CI01000004_06539836_06541252 | NA | other | upstream | 2365647 | 6538904 ~ 6541252 (-) |
| G29388 | NA | other | upstream | 2462113 | 6631293 ~ 6631907 (-) |
| G29656 | NA | other | upstream | 3795184 | 7964364 ~ 7965500 (-) |
