LOC122347901


Basic Information

Item Value
gene id LOC122347901
gene name NA
gene type misc
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 12962377 ~ 12964067 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU77828
ggcTAGGCTACATGAAAATCGAAAGTAAAACTAGGACTGTCAGGTGCCTGGCGAAACATAATATCTTAGTTTTAAATTACTTGCTGTACTTTATTAAACCATAAAGGCATATACATTGTGTCCTATAGCTTATTCGTATGAATATACTCGGTCTTCCAGAAGAAAAGACGAGGTCCAGCTGAGttctgTGATATACGAATGAAGAGTAAGAAAAGCATCCTACACCATATCAGAATGTccacaaaaagaaagaagaccAAGACCCCCAGAAAACCCACAGCCTTCGAGTGTTCACCTGACATTTATGACAAGAGCGAAGTCCAGTATAATGGCCTGAAAAATCAAGGTGCCACCTGCTACCTAAACGCAGTATTGCAATGTCTATTCATGACCCCAAAATTCAAAGAGGCAGTAaagagCTATAAAGTCCCTGCAGATAGTGGTGAAGAAAATCTGTTGCTACAGCTACAAAAGCTGTTTAGACAGATGTCAAAAACTCAGCCACAACTGAAGGAATAA
>XM_043243158.1
TGTGGTGTTGTTAGTAGTCTAGCAGGCTATTAGTTAACCTACCAGCTCAAAGttaaaataagttgacatgCTTGCAAAATTACTAGTCTCTTTACCATCACATTAAGTTAGCAGACATTAGGCTATTTAGACATTAATGAGAATAACCTAACCTTAACAGAACTTGTCAAGTAGTCTTAACCCAACTCCAACCATTTTATCTACTCGCAGCCATATAGGCTAGACCACACACTATTAGTAGTTAAAATGTTGGTTACCTTAAAACTAACCTTCATCGTACATTGTTTATCCTGTTTAATTACTCAATGCCAGGGTGAAGGGATAAATAGGCTAAATGATAGAAGGTTTGCAAAGAAATGTCatgcttttttaatgcatttttataatacaaaattacagTAGTTTATTCTGATACATGGTGTGgctgctgtttctttgtttgtttatttgtttttgtagttctgTGATATACGAATGAAGAGTAAGAAAAGCATCCTACACCATATCAGAATGTccacaaaaagaaagaagaccAAGACCCCCAGAAAACCCACAGCCTTCGAGTGTTCACCTGACATTTATGACAAGAGCGAAGTCCAGTATAATGGCCTGAAAAATCAAGGTGCCACCTGCTACCTAAACGCAGTATTGCAATGTCTATTCATGACCCCAAAATTCAAAGAGGCAGTAaagagCTATAAAGTCCCTGCAGATAGTGGTGAAGAAAATCTGTTGCTACAGCTACAAAAGCTGTTTAGACAGATGTCAAAAACTCAGCCACAACTGAAGGAATAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU77828 False 519 TUCP 0.40 4 12962377 12964067
XM_043243158.1 True 795 mRNA 0.37 3 12962377 12963430

Neighbor

gene id symbol gene type direction distance location
LOC122349348 ccnb1ip1,LOC107738046,LOC107731913,LOC107679269,LOC107683567 coding downstream 136046 12824030 ~ 12826331 (-)
man2b2 man2b2 coding downstream 143573 12811796 ~ 12818804 (-)
si:ch73-71d17.2 LOC107548808,LOC107731942,LOC107558426,LOC107683566 coding downstream 182572 12773700 ~ 12779805 (-)
ntn4 ntn4,LOC107738054,LOC107683517,LOC107548811,LOC107558428,LOC107731949 coding downstream 195902 12755773 ~ 12766475 (-)
dock11 dock11,LOC107683516,LOC107738079,LOC107731893,LOC107679272 coding downstream 206748 12693952 ~ 12755629 (-)
tmem179ba zgc:110591,LOC107683591,LOC107675496,LOC107595317,LOC107731938 coding upstream 109935 13074002 ~ 13078973 (-)
prox3 prox1b,LOC107597067,LOC107675492,LOC107731933,LOC107683531,LOC107595310,LOC107738073 coding upstream 115394 13079461 ~ 13084001 (-)
snx15 snx15,LOC107683532,LOC107738089,LOC107731937,LOC107675487 coding upstream 125762 13089829 ~ 13094961 (-)
trip6 LOC107675502,LOC107683533,LOC107738029,LOC107731934 coding upstream 134373 13098440 ~ 13107079 (-)
acap1 acap1,LOC107683535,LOC107731905,LOC107595305,LOC107675497,LOC107738071 coding upstream 167040 13131107 ~ 13146727 (-)
LOC122349737 NA non-coding downstream 40623 12920609 ~ 12921754 (-)
LOC122349736 NA non-coding downstream 41783 12919874 ~ 12920594 (-)
LOC122348248 NA non-coding downstream 73147 12888598 ~ 12889230 (-)
LOC122348179 si:ch211-163b2.4,sb:cb449,LOC793338,LOC100001444,LOC107575383,LOC107708447 non-coding downstream 84114 12877687 ~ 12878263 (-)
G52502 NA non-coding downstream 95187 12859036 ~ 12867190 (-)
G52631 NA non-coding upstream 191112 13155179 ~ 13157558 (-)
G52651 NA non-coding upstream 266348 13230415 ~ 13231214 (-)
G52653 NA non-coding upstream 271640 13235707 ~ 13236227 (-)
G52663 NA non-coding upstream 288294 13252361 ~ 13257363 (-)
G52765 NA non-coding upstream 365228 13329295 ~ 13330138 (-)
G52473 amdhd1,LOC107683519,LOC107738078 other downstream 189940 12770332 ~ 12772437 (-)
fcer1g LOC107738058,LOC107597895,LOC107683511,LOC107558432,LOC107679284,LOC107731897 other downstream 323504 12633880 ~ 12638873 (-)
sstr1b LOC107558412,LOC107731890,LOC107679244,LOC107597921,LOC107683583,LOC107710341,LOC557645 other downstream 588669 12363597 ~ 12373708 (-)
zfta LOC107711891,LOC107660744,LOC107731900,LOC107679239,LOC793997 other downstream 826438 12122880 ~ 12135939 (-)
G52172 NA other downstream 933678 12028050 ~ 12028699 (-)
LOC122348718 zgc:194655,LOC107683588,LOC107679278,LOC107731931,LOC107558416 other upstream 57 12964124 ~ 12964964 (-)
LOC122347902 LOC107738036,LOC107597071,LOC107683528,LOC107731901,LOC107558414,LOC107679225 other upstream 4270 12968337 ~ 12991221 (-)
zgc:194312 zgc:194312,LOC107683543,LOC107597058,LOC107738022,LOC107675500,LOC107595297,LOC107731916 other upstream 281204 13245271 ~ 13251205 (-)
G52772 LOC107738015,LOC107683576,LOC107597053 other upstream 384450 13348517 ~ 13351621 (-)
chd3 chd3,LOC107702058,LOC107738011,LOC107707064,LOC107683578 other upstream 431772 13395839 ~ 13437648 (-)

Expression


Co-expression Network