tmem179ba (zgc:110591,LOC107683591,LOC107675496,LOC107595317,LOC107731938)


Basic Information

Item Value
gene id tmem179ba
gene name zgc:110591,LOC107683591,LOC107675496,LOC107595317,LOC107731938
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 13074002 ~ 13078973 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043245042.1
GTCGTTAACCCCgactgtgtgtgtctgcgcgTGGCCGCGGCTGGTTAAACACAGTGTGGAGATATAATGGCGCTGCCGAGGCCTCTGCTGCTGGAGCTGCTGTTATACGCCAGCTGTTTTATCTGCGGGATCATCACAGCTGCCTCAGTTACGATCTCACAGGGCAGTTTTGATGGGAAGTGCATGCTGTATGGTTTAGTGCATCTGAACTCCTCATCCATCGACGTGGTTTCATCCAGTTCTCCTTCTCTTTGTTACTTTGTGTCAGCCATCTCGGTGTGTGTGGCCATCTTCTGTTTTTCACTCACTCTCTACTGGACCTACATGGCATTTGTTGACGGAGAGGTGAAAAGAGAGAAATTGTGGATGAATGTTACTCTTGGCTTTTCTGGagtcttcctcttcttcctcttggTGACGGGATGCATCCTGAAAATCGGCCGAGACACACTGTGTGACTCAGTGATTCGCGAAGTGAAAAATATAACCAAGTGTGAAGAAGCACAAAATAAGATTTGGAAGAGCCCTATAAATGGGAGTCAGTTCTTCTCCAGACTACACAGCGCGGAGACGGCAGTATGGGTGAATTTCTTCCTTTGGTTGATCATAGCAGTGCTGATCCTGATCCAGCGTAACAAAGGGTCAGAAATTCGGTCAGAAGGAGAGGACCCGTCAGCGACCCCTTCTGAAACGGAGCCCTTTTTCAACCGCCCAGGACGTTCTTAGTGAACAGAGACACAGCTAATCTATGTCTCTCCACACTAAAGCAGTCTATGTGCcgcttgaacacacacacactcacacgtacATACGCTCGCGTTGACAATCACGCTGCTGGCTAGCAGTTGGCTAGCTGAGCCGAGAGGATTTTGGCAGCTGCAGTATACGGtcttgattttgttcactaGCATTGCCAAGGGTTAGTTGCCATGGTTACTGATCTGTGGCTGGCAGCACAGACCTGGCAGGTGATAGTGTGCGGTTGCCAGATTGGTGGTGTGACCTGAACTGATTGAGACACAGCTTTATGTAAAGAGATCAAATCTGACAACATTGTCGGTGTTTTCATAAGCTGCAAAACGTTATCGAAAAATTTGAATAAACCTTGAAGAGGTCACACTCAACCCTTCAGAAAaggctataaaatatttttacacaatggCTCTCTGGCTTAAACATTTCATGAGTACATATGTTAATTCAAAGACTTTTATAGGGTAACCATTACGTTTAACTTGACTGACCTGGAGTCAAACCAAGTTAACCACTGTACTGTAACTTTTAACTTAAGCCTGCTCTTTGTTAATGTACAACATTTTCGCCCTCTGCtgtctgtttttatgaattacTCCATAAATTCCCATTAGACTGTGCACGTGATGTGTGCCTATTTTGTGGGCCAGGAATCTCCCATaagtgttttttcccccccaatTTCACATTTCTCCTACTCCTAGTCCTTGGCGTCCTTAACATGAGCAAAACTGCTTGAGAGTGTCTTTCTGAGAGTGTTTGGCTATTAATCTTGTGCCCAGTAGAGATGTCattttttaatggctttttcCTGCACACAGCCACGGGAGGtagcagagtgtgtgtgttggggaTGACAGGGACATAAATCCATAATTTGGCCTGTGATGGTATCCGCTTTCCATAGGCGAAGAGCCAAACCCGAGGTGCTGCCCACAGCACTAAAGTCCTCAGAAACGCAGTGTCCTTCCGCCCATTCCAGCAACACAGTGTCCAGGTCCAGTGTCCACGAAACGCTCTATCATCGAATCACTTCACCTCCTCTTTTGGTGCaactttttgtacattttcaattaACTTGCTACTATCGTTTTAGAACTGCTGGTTATGGATTATGCACTGATGTGTTTTATGAATACTAAATCTGTTGTATAACCACCTATGTCAAGAGTTTATGGGCGTGTGAACATTTCGAAATAAATTGGTCCGCCAATGG

Function

NR:

description
transmembrane protein 179B-like

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043245042.1 True 1969 mRNA 0.45 5 13074002 13078973

Neighbor

gene id symbol gene type direction distance location
LOC122349348 ccnb1ip1,LOC107738046,LOC107731913,LOC107679269,LOC107683567 coding downstream 247671 12824030 ~ 12826331 (-)
man2b2 man2b2 coding downstream 255198 12811796 ~ 12818804 (-)
si:ch73-71d17.2 LOC107548808,LOC107731942,LOC107558426,LOC107683566 coding downstream 294197 12773700 ~ 12779805 (-)
ntn4 ntn4,LOC107738054,LOC107683517,LOC107548811,LOC107558428,LOC107731949 coding downstream 307527 12755773 ~ 12766475 (-)
dock11 dock11,LOC107683516,LOC107738079,LOC107731893,LOC107679272 coding downstream 318373 12693952 ~ 12755629 (-)
prox3 prox1b,LOC107597067,LOC107675492,LOC107731933,LOC107683531,LOC107595310,LOC107738073 coding upstream 488 13079461 ~ 13084001 (-)
snx15 snx15,LOC107683532,LOC107738089,LOC107731937,LOC107675487 coding upstream 10856 13089829 ~ 13094961 (-)
trip6 LOC107675502,LOC107683533,LOC107738029,LOC107731934 coding upstream 19467 13098440 ~ 13107079 (-)
acap1 acap1,LOC107683535,LOC107731905,LOC107595305,LOC107675497,LOC107738071 coding upstream 52134 13131107 ~ 13146727 (-)
LOC122348040 NA coding upstream 126522 13205495 ~ 13209101 (-)
LOC122349737 NA non-coding downstream 152248 12920609 ~ 12921754 (-)
LOC122349736 NA non-coding downstream 153408 12919874 ~ 12920594 (-)
LOC122348248 NA non-coding downstream 184772 12888598 ~ 12889230 (-)
LOC122348179 si:ch211-163b2.4,sb:cb449,LOC793338,LOC100001444,LOC107575383,LOC107708447 non-coding downstream 195739 12877687 ~ 12878263 (-)
G52502 NA non-coding downstream 206812 12859036 ~ 12867190 (-)
G52631 NA non-coding upstream 76206 13155179 ~ 13157558 (-)
G52651 NA non-coding upstream 151442 13230415 ~ 13231214 (-)
G52653 NA non-coding upstream 156734 13235707 ~ 13236227 (-)
G52663 NA non-coding upstream 173388 13252361 ~ 13257363 (-)
G52765 NA non-coding upstream 250322 13329295 ~ 13330138 (-)
LOC122347902 LOC107738036,LOC107597071,LOC107683528,LOC107731901,LOC107558414,LOC107679225 other downstream 82781 12968337 ~ 12991221 (-)
LOC122348718 zgc:194655,LOC107683588,LOC107679278,LOC107731931,LOC107558416 other downstream 109038 12964124 ~ 12964964 (-)
LOC122347901 NA other downstream 109935 12962377 ~ 12964067 (-)
G52473 amdhd1,LOC107683519,LOC107738078 other downstream 301565 12770332 ~ 12772437 (-)
fcer1g LOC107738058,LOC107597895,LOC107683511,LOC107558432,LOC107679284,LOC107731897 other downstream 435129 12633880 ~ 12638873 (-)
zgc:194312 zgc:194312,LOC107683543,LOC107597058,LOC107738022,LOC107675500,LOC107595297,LOC107731916 other upstream 166298 13245271 ~ 13251205 (-)
G52772 LOC107738015,LOC107683576,LOC107597053 other upstream 269544 13348517 ~ 13351621 (-)
chd3 chd3,LOC107702058,LOC107738011,LOC107707064,LOC107683578 other upstream 316866 13395839 ~ 13437648 (-)
G52871 NA other upstream 818523 13897496 ~ 13898323 (-)
LOC122347915 NA other upstream 986042 14065015 ~ 14068500 (-)

Expression


Co-expression Network