LOC122348040


Basic Information

Item Value
gene id LOC122348040
gene name NA
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 13205495 ~ 13209101 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043243290.1
GTAATTTGGACCAGTTGTGACAAAAAGCTTTGTGTAGCATGTACGCATTATTCCTTAAAACATGTCTCTTCAATACTATCTGAGactGGCATGGGTTGGTTTGACTCTTTCTGTTGTGGTATGCTTGCCTGAAGTGTCAGGAGATGTCACGGGTGATTCAAAAAGCCAAATACAAGAGCTGGAAAGTGTTAATCCACCCATTCAAAATCCAACAAGAGacaattttcaaaggaaaacgGAACAATTTAACGGCAAAGCTCAGCTGCCATGGATCAGCTCTACCTTATACAACCAGAGAAAGAAATTTAATGAGGAAACTGATGCCAAAGGAAGCTATGTTTTCCAAACGGTTCAACAGGAACAAAATCCCTTTAAAGAGAGCCAAATGAACTTTAGTGATATTAATCTGGCCCCAAGGCTGCTGAGGAAAAAAGGTGGAATGCATGCAGCAAATGTGCATAGATCTGGCTCATTTGGATATcaatctatttttaaatcagaaatgcATTCAGACAGTTCACGACCATTAGGACTTAATGAACCTTACATGAGGGAAAATATTCCAACTAATTATATGTCTAGAAGCGCAACTGTCAACCATAATATCAGGCACAAAAGTGATGGAAACGTGCTGTTTGAtaattttcttcaaaacaatGGCCAAAATCAAAACGTGCTGAGGAGAGTTGTACCAGCAAATACATTTCCATCGATTGCTACAGTAAATCAGCATGAGGGAAAACCATCGCCACAAGCTTTTTCTGCTGGGACTGGAGGTATATCTCAAATGTCCTATGAGAATATGAGGGACGTAGCCCTTTCCAAGGTGTTCAAACCTCCAACAATCCTAACACCAGTATCTCCTGCATTTAAAAGACCAAATTCAAATGGAGTTCATAGCACCCTTCCgataaaaaaatctaagctGTTTTCTTCTCCACGTGATCACGTCAAGCTGTCTAATTCTGAAAGGGTTGCCAATCCAAAAGCAAGCCTGCAAAGCGGTGTTGAACATGGAAATGCAAAATTGGCCACGAGCAGATACAATTTCAAGAACATTCAGTTGGCTCAAAATGGTTATCAAAACAGGGGACAAAGTGGTCAGAATGTTGTGTCAGTTGAAACCTTTCGCAATCAAAAGTATGATAATTTGGCTTCAGGAATATCTGCCATCAAGCCTCCAGTGACCAATAATGCCCGCTTTTACTTCCAATCATATGAAAAAGGTGGCATCCAGCTGTCTGAACCGCTCAAAAGGTCAGGTCAAAACACAGACTTGCCCCCACGAATGCAGTTCACAAAGAAAGCCATGTTAATTTCAGAACgtgataaaaatattaatcttcCAGACCCAACAAATCATTCATTAAGGAGGCCAAGTAAGCAAAATGCCCAAAATAGGACACTTCTGAATTCTTTTGGCCAAAGTACTGTACAATCGTTATCCTTTAAACATCATCACGCGCCAGGTTTTGTGCAAGGTAACGCAATGAAGAGTCACGTTCCCAGCGTTAGTCCATCTGTGTTTGGCACTGAGGGTGCATTTAAAAACTCTGGTAAGTCTAGTAGCCGAAACGAACCATATTATCTAACTTCTAAAAAGCCATATGCTTTTAAAGGTTTCACGTTTGTTCCTGAATtgccaaaacaaaaatcaaaaatgcaCTCTGACCAAAGGCCCCTCTTAGAGTCTTCATCTAATGTGGAGTATGCCCCTGCTCATCCACATACTGCCCAAAGTGCACTTGCTCAGAAACCCTTTACACGTGAGAGctccaaaaaaacacttttccagTTCAAGGACACTGAATCAAGCCAAAAAAACCCACTTTATCGGGATCAGAcagattcttttaaaaatggacCTCCACGTGATACCATCTCTTCTATTGAAGGTGTAAGTAACCCGATGCCTGATGCTCTAAAGCACCATGTTGTTAGAGGTCAAGCTGCAGCAATGAAAACATCTCTCTTTGCCACAAATGCTACAAATAATGGAGCTGTTGACAAGGTTCAGTCAAAAACATCTCACTGGTGGACTTCAAGTAGGCTTGCTTCAGCACAGCCCGCTGAATCGAACAAAGATGCATTCCCAACAGTGAGAAACGGCAGTTTTGTTGGATCCAACTTAAATAAAGCATCCATAACATCTAGCAGCCGTCATAAGGGTCCCACATCAAAGCTCATTCTTCCAATTCATAAGTCTTCTCTTATGAACAAAGTGACTGGGTATGCTAAAATCCAGCCGCTTCACAGCAATAGCTTGAAGGGACATGAAAACTCTGCTGGAACGCCACAGACGTATACTGCGGAAAAACTTAGCCCCATAAGAATGAAACCGACCAGCAGTGTTGTGATTGGTAGGCAAGTTAAAGACAATTCAAACCACCAGAAAGTCTATGCCATCCCAACCTCTCACTCTGCAATTTATAGATCTGCTGACGTTAATCATCATAAAACGAATAACTCTGCCAAGTTCACTTTCCAGTCACCCATACACAGATCTGCTGTAAAACCTTCTGGCAAAGCTAACATCCTACAAGCTAATGCTTCAGACTGGAGGACAGGAACGTCTCAAATCTCAGAAGCAGATATCAATCTTAGTGCCGTCGGCGTGTCCCAAGCTTTAAGACCCACAAGCAGCTTTGTAGTTGGAAAGTACATTAATAAGTTTGATAGAACCCCAACCAAATCCAACCTTAACACGTATTCAACAAAATCAGGCCTAAACGATTATAAATCACTTCAGTTTTCTGATATTGTAGGTAGCGCCTCCTTCACCGACGTCAAATTTTATTCTGAAAGCACCACGGCGTCGGAAGAAGTGGATCTCGAAAGTGATCAAAACGCCACTAATTCAATGGAGGAAAGTTTCAAAGAGCTGTTTTTTGACAATTCCTCTATGATCTCGGctttacaaaatgaaatgaatgaaagcgCAGTGGATATACGTGTCCCCGAGTTTATGCCAGCAACTGCTATAGACTTCACCACACTATCATCTCAGCTATCATCCCTTCTTACAAAAGAACCTACTCAACCTCAACCAACTGTCCGTTCCTCTGAGTCGCAGCCGGATCCTGGGAATCATTCCCCATCTACACCAGAGGGTACCATTATAATTCATGAGACAACATTGATACCCAATACTACTTTGCAAGATAAAATGACCTCAGGTTGAGATATGCCTCTTCAAATATTTTGTTGAATGCGCTTCAGTAGTAGTCGACAGACTGCAATGTGAGGTGTTGTTCTCTTCTGTAGGTAGATGGCGCCAGATTTGTCCTCAGactaatttgtattaaatttgtAACTTCTGaga

Function

GO:

id name namespace
GO:0061134 peptidase regulator activity molecular_function
GO:0061135 endopeptidase regulator activity molecular_function
GO:0030414 peptidase inhibitor activity molecular_function
GO:0004866 endopeptidase inhibitor activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043243290.1 True 3322 mRNA 0.41 3 13205495 13209101

Neighbor

gene id symbol gene type direction distance location
acap1 acap1,LOC107683535,LOC107731905,LOC107595305,LOC107675497,LOC107738071 coding downstream 58768 13131107 ~ 13146727 (-)
trip6 LOC107675502,LOC107683533,LOC107738029,LOC107731934 coding downstream 98416 13098440 ~ 13107079 (-)
snx15 snx15,LOC107683532,LOC107738089,LOC107731937,LOC107675487 coding downstream 110534 13089829 ~ 13094961 (-)
prox3 prox1b,LOC107597067,LOC107675492,LOC107731933,LOC107683531,LOC107595310,LOC107738073 coding downstream 121494 13079461 ~ 13084001 (-)
tmem179ba zgc:110591,LOC107683591,LOC107675496,LOC107595317,LOC107731938 coding downstream 126522 13074002 ~ 13078973 (-)
si:ch73-335l21.4 LOC107738024,LOC107597061,LOC107683540 coding upstream 195 13209296 ~ 13210620 (-)
ntn5 ntn5,LOC107738020,LOC107597057,LOC107683546,LOC107707055,LOC107702064,LOC107595331 coding upstream 72793 13281894 ~ 13299383 (-)
trnai-uau NA coding upstream 91836 13300937 ~ 13301030 (-)
cnpy4 cnpy4,LOC107738087,LOC107683593,LOC107702065,LOC107707051 coding upstream 92484 13301585 ~ 13304240 (-)
trnai-uau_1 NA coding upstream 92740 13301841 ~ 13301934 (-)
G52631 NA non-coding downstream 47937 13155179 ~ 13157558 (-)
LOC122349737 NA non-coding downstream 283741 12920609 ~ 12921754 (-)
LOC122349736 NA non-coding downstream 284901 12919874 ~ 12920594 (-)
LOC122348248 NA non-coding downstream 316265 12888598 ~ 12889230 (-)
LOC122348179 si:ch211-163b2.4,sb:cb449,LOC793338,LOC100001444,LOC107575383,LOC107708447 non-coding downstream 327232 12877687 ~ 12878263 (-)
G52651 NA non-coding upstream 21314 13230415 ~ 13231214 (-)
G52653 NA non-coding upstream 26606 13235707 ~ 13236227 (-)
G52663 NA non-coding upstream 43260 13252361 ~ 13257363 (-)
G52765 NA non-coding upstream 120194 13329295 ~ 13330138 (-)
G52766 LOC107738018,LOC107683574,LOC107597056,LOC107702063,LOC107707057 non-coding upstream 123634 13332735 ~ 13338482 (-)
LOC122347902 LOC107738036,LOC107597071,LOC107683528,LOC107731901,LOC107558414,LOC107679225 other downstream 214274 12968337 ~ 12991221 (-)
LOC122348718 zgc:194655,LOC107683588,LOC107679278,LOC107731931,LOC107558416 other downstream 240531 12964124 ~ 12964964 (-)
LOC122347901 NA other downstream 241428 12962377 ~ 12964067 (-)
G52473 amdhd1,LOC107683519,LOC107738078 other downstream 433058 12770332 ~ 12772437 (-)
fcer1g LOC107738058,LOC107597895,LOC107683511,LOC107558432,LOC107679284,LOC107731897 other downstream 566622 12633880 ~ 12638873 (-)
zgc:194312 zgc:194312,LOC107683543,LOC107597058,LOC107738022,LOC107675500,LOC107595297,LOC107731916 other upstream 36170 13245271 ~ 13251205 (-)
G52772 LOC107738015,LOC107683576,LOC107597053 other upstream 139416 13348517 ~ 13351621 (-)
chd3 chd3,LOC107702058,LOC107738011,LOC107707064,LOC107683578 other upstream 186738 13395839 ~ 13437648 (-)
G52871 NA other upstream 688395 13897496 ~ 13898323 (-)
LOC122347915 NA other upstream 855914 14065015 ~ 14068500 (-)

Expression


Co-expression Network