G52832


Basic Information

Item Value
gene id G52832
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 13783313 ~ 13783725 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU78322
NNNNTTCCGAACAAGACTTCGTGAATCCGGAGTAGCGGAAGACGGCGGAAGGTGTAAGCAGTAAGCGGGTGAATGTAGTGGGAAACTCCACGGAAACCTGTACAGGTACAAAAAAGTTTGAGTCGAGAGGTGTGCGTGTAGAGCTGAGAAACCGGCTTTGCGTTTCCGAACCGAGGAAAAGGCAACCGAAGACATCGTATAAGAAGGACTTTACACCTGTTTTGCACCGTGGACCGGTTTTTCCTAAAGTAGCTGGGTCGGTGTTTAAAAGCCTGCCGTTTAATTTCGAAAGATAGCGGGGAAGGACCTCGGGAATAGACCATGCCACGGGCTTTCCTGGTGAAGAAAACGGGGAATTCGCCCGGCAAGAGAAACTGGAGCGACCTGCCAGATCACGAACGCGGTGACATTTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU78322 True 413 lncRNA 0.50 1 13783313 13783725

Neighbor

gene id symbol gene type direction distance location
LOC122347905 LOC107738090,LOC107683590,LOC107597097,LOC107675488,LOC107595316,LOC107731889 coding downstream 1009 13780136 ~ 13782304 (-)
fis1 fis1,LOC107738082,LOC107597091,LOC107702049,LOC107595287,LOC108434607 coding downstream 322779 13457235 ~ 13460534 (-)
cldn15a cldn15a,cldn15,LOC107738083,LOC107597092,LOC107683556,LOC107707054,LOC107702050,LOC107595325 coding downstream 331901 13449136 ~ 13451412 (-)
dnajc3b dnajc3b,LOC107683555,LOC107738010,LOC107707053,LOC107702051,LOC107595288 coding downstream 334820 13441647 ~ 13448493 (-)
LOC122349460 cyb5d1,LOC107738084,LOC107707052,LOC107595290,LOC107702060,LOC107683579,LOC108434590 coding downstream 341809 13439367 ~ 13441504 (-)
LOC122349518 LOC107683502,LOC107710157,LOC107597890,LOC107731947,LOC107679291,LOC107558439 coding upstream 47050 13830775 ~ 13834023 (-)
LOC122348562 LOC563681,LOC107738039,LOC107679277,LOC107558415,LOC107735524 coding upstream 132024 13915749 ~ 13917329 (-)
LOC122348557 LOC107683524,LOC107738038,LOC107574337,LOC107731927 coding upstream 139240 13922965 ~ 13927510 (-)
LOC122348559 NA coding upstream 144044 13927769 ~ 13931950 (-)
LOC122348558 slc7a7,LOC107738042,LOC107683525,LOC107731885,LOC107558406,LOC107574338 coding upstream 153066 13936791 ~ 13944925 (-)
G52808 efnb3,efnb3b,LOC107738062,LOC107597046,LOC107664265 non-coding downstream 177867 13506127 ~ 13605446 (-)
G52803 NA non-coding downstream 286263 13495713 ~ 13497050 (-)
G52789 NA non-coding downstream 299158 13476102 ~ 13484155 (-)
G52787 NA non-coding downstream 329016 13453918 ~ 13454297 (-)
G52786 NA non-coding downstream 330859 13451807 ~ 13452454 (-)
G52841 NA non-coding upstream 34243 13817968 ~ 13818775 (-)
G52848 NA non-coding upstream 77892 13861617 ~ 13861902 (-)
G52850 NA non-coding upstream 82302 13866027 ~ 13866227 (-)
G52870 NA non-coding upstream 104743 13888468 ~ 13889154 (-)
G52872 NA non-coding upstream 115311 13899036 ~ 13899822 (-)
chd3 chd3,LOC107702058,LOC107738011,LOC107707064,LOC107683578 other downstream 345665 13395839 ~ 13437648 (-)
G52772 LOC107738015,LOC107683576,LOC107597053 other downstream 431692 13348517 ~ 13351621 (-)
zgc:194312 zgc:194312,LOC107683543,LOC107597058,LOC107738022,LOC107675500,LOC107595297,LOC107731916 other downstream 532108 13245271 ~ 13251205 (-)
LOC122347902 LOC107738036,LOC107597071,LOC107683528,LOC107731901,LOC107558414,LOC107679225 other downstream 792092 12968337 ~ 12991221 (-)
LOC122348718 zgc:194655,LOC107683588,LOC107679278,LOC107731931,LOC107558416 other downstream 818349 12964124 ~ 12964964 (-)
G52871 NA other upstream 113771 13897496 ~ 13898323 (-)
LOC122347915 NA other upstream 281290 14065015 ~ 14068500 (-)
G52897 LOC107558424,LOC107731920 other upstream 285388 14069113 ~ 14073699 (-)
LOC122347917 LOC107738092,LOC107683518,LOC107548777 other upstream 291818 14075543 ~ 14090441 (-)
G52917 LOC105896813 other upstream 360781 14144506 ~ 14145280 (-)

Expression


Co-expression Network