G53859


Basic Information

Item Value
gene id G53859
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056705.1
NCBI id CM032074.1
chromosome length 41700998
location 17031509 ~ 17031790 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU79873
GCTGTGTGCACCTACATTCATAAATATCATGCGGTTTCGAAAAGACTGCAATAGGGAGTACTGTGTAATTTCACATAAATCTCTGAAACATTTGTTTCTTTGGAAGACATACAATTGCACAGCTAGATGGATGACTTATGATGGTCCATCAAATGTGGTTTGGTGTATGAAACATTCATGGACTGAGAGACTAACTGCATTCAGCAGAAAGAGCAGACAGCCAAAATAGTCTAGACATAAGCACTTTTGAGGGGTACTGGAGATGCTCTCAGGATATTTCTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU79873 True 282 lncRNA 0.40 1 17031509 17031790

Neighbor

gene id symbol gene type direction distance location
znf710b znf710b,LOC107585980,LOC107670757,LOC107750504,LOC107741417,LOC107700425,LOC107593042 coding downstream 3730 17016743 ~ 17027779 (-)
tmed3 tmed3,LOC107750507,LOC107741415,LOC107700389,LOC107585977,LOC108441851 coding downstream 41271 16988349 ~ 16990238 (-)
frmd5b frmd5,LOC107750639,LOC107586052,LOC107670731,LOC107700423,LOC107741413,LOC107593056,LOC108441847 coding downstream 43884 16969659 ~ 16987625 (-)
alpk3b LOC107670775,LOC107750508,LOC107586023,LOC108264806 coding downstream 63665 16956271 ~ 16967844 (-)
nmbb nmbb,LOC107750640,LOC107741440,LOC107700388,LOC107594526,LOC107670735,LOC107585974 coding downstream 82174 16948303 ~ 16949335 (-)
harbi2 zgc:162945,LOC107586056,LOC107750502,LOC107670729,LOC107750603,LOC107741428 coding upstream 12108 17043898 ~ 17046378 (-)
aldh1a2 aldh1a2,LOC107670770,LOC107585984,LOC107700428,LOC107593009,LOC107750602 coding upstream 39402 17071192 ~ 17093116 (-)
adam10a LOC107750500,LOC107670741,LOC107700430,LOC107741424,LOC107585986 coding upstream 83004 17114794 ~ 17157406 (-)
sltm LOC107670749,LOC107700432,LOC107750497,LOC107731800 coding upstream 150222 17182012 ~ 17193283 (-)
rnf111 LOC107731799,LOC107700434,LOC107595081,LOC107750495 coding upstream 162191 17193981 ~ 17225428 (-)
G53854 NA non-coding downstream 18527 17012219 ~ 17012982 (-)
G53850 NA non-coding downstream 24827 16999760 ~ 17006682 (-)
G53849 NA non-coding downstream 25613 16999226 ~ 17005896 (-)
LOC122348047 NA non-coding downstream 100178 16926570 ~ 16931331 (-)
G53774 NA non-coding downstream 439544 16591682 ~ 16591965 (-)
G53884 lipc,lipca,LOC107670742 non-coding upstream 75092 17106882 ~ 17107447 (-)
G53942 mtmr10,LOC107586029,LOC107670739,LOC107755009,LOC107750493 non-coding upstream 262134 17293924 ~ 17529789 (-)
G53949 apba2b,LOC107755052 non-coding upstream 314550 17346340 ~ 17585166 (-)
G53963 NA non-coding upstream 576256 17608046 ~ 17608330 (-)
G53965 NA non-coding upstream 576556 17608346 ~ 17608605 (-)
G53797 tpm1,LOC103462590 other downstream 97257 16881893 ~ 16934252 (-)
nrn1lb nrn1lb,LOC107750645,LOC107586039,LOC107594653,LOC107741430 other downstream 467171 16560418 ~ 16564338 (-)
rnaseka rnaseka,rnasek,LOC107750577,LOC107561913,LOC107678101,LOC107749794,LOC107594736,LOC107669181 other downstream 2056341 14973703 ~ 14975168 (-)
G52917 LOC105896813 other downstream 2886229 14144506 ~ 14145280 (-)
LOC122347917 LOC107738092,LOC107683518,LOC107548777 other downstream 2941068 14075543 ~ 14090441 (-)
serf2b NA other upstream 14654 17046444 ~ 17048041 (-)
LOC122349446 arl14ep,LOC107663944,LOC107740492,LOC107554899,LOC107700465,LOC107755038 other upstream 1634483 18666273 ~ 18669833 (-)
G54312 LOC107663979,LOC107557712,LOC107740422,LOC107700467,LOC107553073,LOC107755077,LOC108430810 other upstream 1710370 18742160 ~ 18794207 (-)
G54330 LOC107557708,LOC107553077,LOC107740430,LOC107700368 other upstream 1814486 18846276 ~ 19291166 (-)
LOC122348206 tph1b,LOC107740493,LOC107557706,LOC107663941,LOC107553080,LOC108430795 other upstream 1877858 18909648 ~ 18914921 (-)

Expression


Co-expression Network