G63065


Basic Information

Item Value
gene id G63065
gene name NA
gene type non-coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 11523022 ~ 11523638 (-)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>TU93371
TTGAATTCCTAACCGTACTGCCACCGCGGCACACAAATCCCAGAGACCCAAAAGAAGGAGGACAATAGCCACGGCCGCTTGAATTGAGGCTGCAGAATCATATAGCCGTGCAGCTCTTAAAGGCAGTGAATATAGGCCACTGGTCGGCCTGCTCTGCGCAATATATGCGTTGGTATTTGACTGCGGTTCACGCGAAATCGAAACAGAAGACAGTGTAGAAACAACACAGCGATTGTAATTTTGACGTTTTGTCGTCGGCGGGTTGTCAAAAGGCATTACGACATCCCTCTTTGCGGTACTCTTTGAAGAGCAGCCTGCTCCGGTGTGCGCGCGTCACGGAGGGTGGTGACACGGGCCCGCCGCTCTGCGTGTTCACGGCGGACCTTGATTTAATATCCATACAATTAAGGCACGCGGTGAATGCCAAGAGAGGGGCCTTACAACGGCGAACCTGAATCGTTAGGAAAAATGAGCAGCAGAGACGCGCAGATCCAGAGTAAAGGCTAGTGAAGCCAAAGAGCTGCACAGGAACTGAGGCCGCTTGGTTTGCAGGCGCATGATAGGAATATTAATTTCGGGAGCTGACAGGAATGTGAAATtccacttatatatatata

Function

GO: NA

KEGG:

id description
ko04080 Neuroactive ligand-receptor interaction

RNA

RNA id representative length rna type GC content exon number start site end site
TU93371 True 617 lncRNA 0.50 1 11523022 11523638

Neighbor

gene id symbol gene type direction distance location
si:dkey-70p6.1 LOC107731205,LOC107668067,LOC107745762,LOC107549481,LOC107549992 coding downstream 18990 11481644 ~ 11504032 (-)
emilin3a LOC107668027,LOC107731182,LOC107549958,LOC107550125,LOC107695222,LOC107745820 coding downstream 71576 11445273 ~ 11451446 (-)
magixa magixa,LOC107731248,LOC107668068,LOC107549995,LOC107695301 coding downstream 130351 11351304 ~ 11392671 (-)
porcnl LOC107731263,LOC107549961,LOC107668005,LOC107695296,LOC107550497,LOC107745836 coding downstream 266514 11250881 ~ 11256508 (-)
csde1 csde1,LOC107731193,LOC107549382,LOC107695294,LOC107549999,LOC107745769,LOC107668033 coding downstream 272439 11235474 ~ 11250583 (-)
ptk6a ptk6,LOC107731218,LOC107668051 coding upstream 45910 11569548 ~ 11575213 (-)
nol4la nol4la,LOC107549982,LOC107731219,LOC107745834,LOC107680239,LOC107550513,LOC107668103,LOC108412512,LOC103039117 coding upstream 55524 11579162 ~ 11615271 (-)
gpr173 gpr173,LOC107731146,LOC107678674,LOC107549585,LOC107549979,LOC107745752 coding upstream 151636 11675274 ~ 11683625 (-)
wasb LOC107731288,LOC107668059,LOC107745750,LOC107549977,LOC107678704,LOC107549603 coding upstream 219501 11743139 ~ 11747881 (-)
slc38a5b slc38a5b,slc38a5,LOC107668060,LOC107549975,LOC107731265,LOC107745748,LOC107678718,LOC107549617 coding upstream 225958 11749596 ~ 11764650 (-)
G63014 NA non-coding downstream 81026 11406954 ~ 11441996 (-)
G62992 NA non-coding downstream 246108 11276359 ~ 11276914 (-)
G62977 NA non-coding downstream 312861 11201695 ~ 11210161 (-)
G62974 NA non-coding downstream 317649 11197153 ~ 11205373 (-)
LOC122351000 NA non-coding downstream 697971 10819217 ~ 10825051 (-)
G63071 NA non-coding upstream 10911 11534549 ~ 11534772 (-)
G63072 NA non-coding upstream 12405 11536043 ~ 11536517 (-)
G63073 NA non-coding upstream 14374 11538012 ~ 11538299 (-)
G63074 NA non-coding upstream 15873 11539511 ~ 11539833 (-)
G63068 dnajc5,dnajc5aa,LOC107678568,LOC107668106,LOC103036084,LOC108412505,LOC100691596 non-coding upstream 20351 11543989 ~ 11545449 (-)
LOC122350269 LOC107549994,LOC107731173,LOC107745767,LOC107695299,LOC107668028,LOC560461,LOC107549455 other downstream 177034 11284354 ~ 11345988 (-)
smim1 smim1,LOC107668050 other downstream 353549 11131670 ~ 11169473 (-)
LOC122349915 nphp4,LOC107550077,LOC107695281 other downstream 391784 11096140 ~ 11131238 (-)
cep104 cep104,LOC107668088,LOC107745778 other downstream 532287 10973305 ~ 10990735 (-)
trnar-ccg_26 NA other downstream 982731 10540219 ~ 10540291 (-)
G63095 NA other upstream 38640 11562278 ~ 11615925 (-)
G63274 nt5dc2,LOC107731170,LOC107549943,LOC107668043,LOC107550186,LOC107678756,LOC107745746 other upstream 254633 11778271 ~ 11779251 (-)
prok1 prok1,LOC107680267,LOC107711938,LOC107731240 other upstream 527719 12051357 ~ 12054530 (-)
G63385 NA other upstream 740056 12263694 ~ 12264533 (-)
kcnq2a LOC107679259,LOC107668096,LOC107731192,LOC107550457,LOC108442249,LOC108265949,LOC107711924 other upstream 818522 12342160 ~ 12363104 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
rainbow trout (Oncorhynchus mykiss) G2097868 NA non-coding NC_048592.1 CM023246.2 5071567 ~ 5073424 (-)
eurasian perch (Perca fluviatilis) G203482 NA non-coding NC_053131.1 CM020928.1 17055131 ~ 17097020 (-)
striped catfish (Pangasianodon hypophthalmus) G131987 NA non-coding NC_047602.1 CM018548.1 13433917 ~ 13435294 (+)
mexican tetra (Astyanax mexicanus) G79179 NA non-coding NC_035905.1 CM008308.1 10189740 ~ 10192215 (+)