mfsd14bb (si:ch211-87m7.2,LOC108430319,LOC103035659,LOC108265778,LOC107697580,LOC107726864)


Basic Information

Item Value
gene id mfsd14bb
gene name si:ch211-87m7.2,LOC108430319,LOC103035659,LOC108265778,LOC107697580,LOC107726864
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 747411 ~ 759368 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246154.1
GTGTTTCGGAATGTTAGAAAGTGGAAGAGAAGAGCTTTAGCGAGAGCTGAacgaattaaattaaaaagcggCTCGATTGATCGAATCCAACCAGGATGATTGAGATCTCGAGCAGGATGTGAGGAACGGACGGAAAACATCATGCTGATCAAACACCTCAGAcaGCGCAGCGTCGGCCAGGCGAAGGTGGCCCATGCAGTGGTGGTGATCTTCATGGAGTTTTTCGCCTGGGGTCTCCTGACCACCCCGATGCTGACGGTCCTGCACGAAACGTTTCCCCAGCACACGTTCCTCATGAACGGCCTCATTCAGGGCGTCAAGGGGTTTCTGTCGTTCATGAGCGCTCCTCTGATCGGTGCCTTGTCTGATGTTTGGGGCAGAAAGAGTTTCCTGCTGCTCACGGTGTTCTTCACCTGCGCCCCCATCCCTCTAATGAGACTCAGCCCATGGTGGTTTTTCGCTCTGATGTCCGTGTCTGGACTTTTCTCTGTTACGTTCTCTGTCATATTTGCGTATGTGGCTGATATCACAGAAGAGAATGAAAGAAGCACAGCATATGGACTGGTCTCTGCCACGTTCGCGGCGAGTTTAGTGACGAGTCCGGCCATCGGAGCGTTCCTGTCCCTGCGGTACGGAGACAGTCTGGTGGTCCTGCTGGCCACCATCATCGCCGTGGCTGACATCCTGTTCGTTCTGCTGGTGGTGCCCGAGTCTCTGCCGGATAAAATGAGGCTGTCTTCGTGGGGGTTGCCTATTTCCTGGGAGCAGGCCGACCCTTTCGCTtctctGAGGAAGGTGGGTAAAGACTCGACGGTGCTGCTGATCTGTGTCACAGTGTTCCTGTCGTATCTCCCTGAAGCCGGACAGTACTCCAGTTTTTTCCTCTATCTGGGACAGGTCATTAACTTCTCCTCAGAAGCGATTGCAGCGTTTATTGCGATGGTGGGGATCCTGTCCATCGTAGCTCAGACGCTGCTGTTAAGCGTCCTGATGAAGAAGATTGGGAATAAGAGCACCGTTCTGCTGGGTCTGGGCTTCCAGCTCTTCCAGCTGGCCTGGTACGGCTTCGGCTCTGAAGCATGGATGATGTGGGCGGCCGGGGCCGTCGCTGCCATGTCCAGCATCACTTTCCCAGCCGTGAGCGCTCTGGTGTCCCACTGCACGGATCACGACCAGCAGGgagcCGTTCAGGGCATGATCACAGGGATCCGGGGTCTGTGTAACGGACTCGGCCCAGCTATGTTTGGATTCATTTTCTTCATCTTCAACGTGGAACTGAAGGAGATGAGCCCCGTGGATCAGAATCCTGTGTCACCGGACCCTGAAGAGAAGCGTGTGATTCCCGGTCCTCCCTTCCTCTTCGGCGCCTGTACGGTTCTCCTGGCTCTGCTGGTGGCGGTTTTCATTCCAGCTCCACAGGCTCCGGCCGTGAAGACCTGCAGCACTCGTGTGATGACGGAGTCTGCGAGCGGCGTCACGGAGAACGGCTCGGTTCCTGTCAGCGACGAAGACAACGAGCCTCTTTTACAGGACAGCAATTTATAAACCCAACACACTGCAAACCAGACTCTCGTACTTGGTGTGTTTGTCCCGCTTTCTAGTattaatatctaaacattcttgAATCAAGATCAACTTACTGTACAAGTTAAATGATTTGAGATATTATtatcttgttttctttaaaaaacaaacaaacaggttttgcttaaaaacaagcaaaaatatccGTCAATGAGGCAAAAATAATCTTGATTAGACTTTGAATTGAGATTTCTTGCCccattaa
>XM_043246155.1
GTGTTTCGGAATGTTAGAAAGTGGAAGAGAAGAGCTTTAGCGAGAGCTGAacgaattaaattaaaaagcggCTCGATTGATCGAATCCAACCAGGATGATTGAGATCTCGAGCAGGATGTGAGGAACGGACGGAAAACATCATGCTGATCAAACACCTCAGACGCAGCGTCGGCCAGGCGAAGGTGGCCCATGCAGTGGTGGTGATCTTCATGGAGTTTTTCGCCTGGGGTCTCCTGACCACCCCGATGCTGACGGTCCTGCACGAAACGTTTCCCCAGCACACGTTCCTCATGAACGGCCTCATTCAGGGCGTCAAGGGGTTTCTGTCGTTCATGAGCGCTCCTCTGATCGGTGCCTTGTCTGATGTTTGGGGCAGAAAGAGTTTCCTGCTGCTCACGGTGTTCTTCACCTGCGCCCCCATCCCTCTAATGAGACTCAGCCCATGGTGGTTTTTCGCTCTGATGTCCGTGTCTGGACTTTTCTCTGTTACGTTCTCTGTCATATTTGCGTATGTGGCTGATATCACAGAAGAGAATGAAAGAAGCACAGCATATGGACTGGTCTCTGCCACGTTCGCGGCGAGTTTAGTGACGAGTCCGGCCATCGGAGCGTTCCTGTCCCTGCGGTACGGAGACAGTCTGGTGGTCCTGCTGGCCACCATCATCGCCGTGGCTGACATCCTGTTCGTTCTGCTGGTGGTGCCCGAGTCTCTGCCGGATAAAATGAGGCTGTCTTCGTGGGGGTTGCCTATTTCCTGGGAGCAGGCCGACCCTTTCGCTtctctGAGGAAGGTGGGTAAAGACTCGACGGTGCTGCTGATCTGTGTCACAGTGTTCCTGTCGTATCTCCCTGAAGCCGGACAGTACTCCAGTTTTTTCCTCTATCTGGGACAGGTCATTAACTTCTCCTCAGAAGCGATTGCAGCGTTTATTGCGATGGTGGGGATCCTGTCCATCGTAGCTCAGACGCTGCTGTTAAGCGTCCTGATGAAGAAGATTGGGAATAAGAGCACCGTTCTGCTGGGTCTGGGCTTCCAGCTCTTCCAGCTGGCCTGGTACGGCTTCGGCTCTGAAGCATGGATGATGTGGGCGGCCGGGGCCGTCGCTGCCATGTCCAGCATCACTTTCCCAGCCGTGAGCGCTCTGGTGTCCCACTGCACGGATCACGACCAGCAGGgagcCGTTCAGGGCATGATCACAGGGATCCGGGGTCTGTGTAACGGACTCGGCCCAGCTATGTTTGGATTCATTTTCTTCATCTTCAACGTGGAACTGAAGGAGATGAGCCCCGTGGATCAGAATCCTGTGTCACCGGACCCTGAAGAGAAGCGTGTGATTCCCGGTCCTCCCTTCCTCTTCGGCGCCTGTACGGTTCTCCTGGCTCTGCTGGTGGCGGTTTTCATTCCAGCTCCACAGGCTCCGGCCGTGAAGACCTGCAGCACTCGTGTGATGACGGAGTCTGCGAGCGGCGTCACGGAGAACGGCTCGGTTCCTGTCAGCGACGAAGACAACGAGCCTCTTTTACAGGACAGCAATTTATAAACCCAACACACTGCAAACCAGACTCTCGTACTTGGTGTGTTTGTCCCGCTTTCTAGTattaatatctaaacattcttgAATCAAGATCAACTTACTGTACAAGTTAAATGATTTGAGATATTATtatcttgttttctttaaaaaacaaacaaacaggttttgcttaaaaacaagcaaaaatatccGTCAATGAGGCAAAAATAATCTTGATTAGACTTTGAATTGAGATTTCTTGCCccattaac

Function

NR:

description
PREDICTED: hippocampus abundant transcript-like protein 1 isoform X1

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246154.1 True 1789 mRNA 0.52 12 747411 759367
XM_043246155.1 False 1787 mRNA 0.52 12 747411 759368

Neighbor

gene id symbol gene type direction distance location
loxhd1b loxhd1,loxhd1b,LOC108430301,LOC108265797 coding upstream 36073 672870 ~ 711338 (+)
ptger4a ptger4a,LOC107661536,LOC107569669,LOC107704591,LOC107726867,LOC107661538 coding upstream 77880 664631 ~ 669531 (+)
mrps27 mrps27 coding upstream 89192 652589 ~ 658219 (+)
znf366 znf366,LOC107726882,LOC107573350,LOC107704577,LOC108430334 coding upstream 99108 635423 ~ 648303 (+)
smyd1b smyd1b,LOC107712675,LOC107569675,LOC107661523,LOC108430330 coding upstream 118894 613544 ~ 628517 (+)
LOC122350985 NA coding downstream 22456 781824 ~ 784101 (+)
zgc:101664 NA coding downstream 27071 786439 ~ 788658 (+)
LOC122350088 NA coding downstream 29813 789181 ~ 801745 (+)
LOC122350422 NA coding downstream 50671 810039 ~ 820685 (+)
LOC122350421 slc12a2,LOC107697601,LOC107712558,LOC108442001,LOC108265961,LOC107573338,LOC105890695,LOC107726215 coding downstream 62991 822359 ~ 841932 (+)
G59762 NA non-coding upstream 20406 626849 ~ 727005 (+)
G59756 NA non-coding upstream 102843 567295 ~ 644568 (+)
G59761 NA non-coding upstream 116065 629672 ~ 631346 (+)
LOC122350371 NA non-coding upstream 139404 599711 ~ 608007 (+)
G59735 NA non-coding upstream 181581 562860 ~ 565830 (+)
G59815 NA non-coding downstream 114520 873888 ~ 874199 (+)
G59811 NA non-coding downstream 188309 947677 ~ 950973 (+)
G59825 NA non-coding downstream 197855 957223 ~ 958231 (+)
G59824 NA non-coding downstream 199311 958679 ~ 960171 (+)
G59814 NA non-coding downstream 214118 973486 ~ 976706 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 196724 537775 ~ 550687 (+)
G59807 NA other downstream 44285 803653 ~ 804839 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other downstream 82709 842077 ~ 852004 (+)
pggt1b pggt1b other downstream 451447 1210815 ~ 1218804 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 1156092 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 1255491 2014859 ~ 2020034 (+)

Expression


Co-expression Network