mrps27 (mrps27)


Basic Information

Item Value
gene id mrps27
gene name mrps27
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 652589 ~ 658219 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246125.1
GATTCTTCGTGAACCTCCCCCCCTCCTCCCGCGCCGGATGGTTCAGTCTCAAGATGGCCGCCTCCATCCTGCGGCGCTGTCTGTCTCCCGTTCAAACCTTCAACAAACGCGTTAATTACAGAGCCGTCGCCAGGAGATGTCTGCTGTCTTCGGCGTACACAGACCCTGCTGTTTGGGAGCAGAGACCCAAAGATGCACAGGACCTAAGTCAGCTGGCGTCTCTGATGGACAGAACGTATGAGAGGAAGTTTCCCGTCAGCTCTTTGGTCATTTCCAGGGTCAGAGAGGATTTTACATGGCGTTTTAAACATATAGTGCACTGCATTCACACGGAGGACTCTGctgctcgtTTCATAGATAATTTATCATCAAAAGAGGAGGTGGATCAAGCCCAATATTACCTGTATAAGTTTCGTCACAGTCCAAACTGCTGGTATCTTCGGGACTGGACCGTTCACAGCTGGATCCGACATTGTCTTAAATACAGCGCCAGAGATAAAGCCCTCTACACGCTGAAGAACAAGGTTCAGTTCGGCATGTTTCCCGATGACTTCACCTTCAATCTTCTGATCGACTCCTTCATAAAAGACCAGGACTTTAAAGGAGCCTGTTCGGTGGTGGAGGAAGTGATGCTTCAGGAGTCGTTTGAGCGAATCTCCACGCAGATCCTGTCGCTTCACGCCCTCAGCAGGTACCTGGCGACCGAGCCCCACCTCgggTGGGAGGAGGAGAGGAACCTGGGAGCGTGTCTGATGCTGGCCGGACTCAAGCAGGAGAACTCCGTCGGCTTCAGCGCTCGTCTGCTGGGATTGGCTCTCATCGGTAAAGTGGAGCTGTCCCGAGGGATTCACGCCGTGTTTCACAAGATGCCCCTGATCTGGACCTCGGGTTATCTCGGGCGAGCCCTGGCCGTCATGAGCGCCGCGTGCGACTTCAGAGACGTCAAGATATCTGAGGAAGTCCTGGCCCGCGTGGAGAAGATCTTGCAGGATCTCTCAGAGAACGTCTCCGACTCGCCGCCGGAGGAAGACGACGCGCTGGAGGCACGCAAGCTACCGGAGTACGTCAGCCGCTTCGAGGAGCTGAAGGAGCGCCTGGTGTCTCGGGACCGGACCGACTCGAGGAGTCTGGAGTCCCTGGCGTCGTCTCTGACGGGGAAGGCGCTGGCGGCGTGTGAAGACGCAGACCTGGCCGAGTACCAGCGGACGCTGAAGGACTGGGAGTCCGAGCGGCAGCAGCTCATTCTCAGGGAAAGAGAGACGAGGGAGAAGAACCAGAAGAGCGTCTGAGCAGACCGCGTCCTGCAGACAGAGCATTGTTTGTCGTGTTTATTGTCTTTGGTTGGGTCGGTCGAGATAGAGGTTTGTGTGTTAATATTATTGGGATTCTTTTTCAACGCCCTGTAAGTCCGAGcggtataaataaacaatgaaaatactCTTTTA
>XM_043246126.1
ATTCTTCGTGAACCTCCCCCCCTCCTCCCGCGCCGGATGGTTCAGTCTCAAGATGGCCGCCTCCATCCTGCGGCGCTGTCTGTCTCCCGTTCAAACCTTCAACAAACGCGTTAATTACAGAGCCGTCGCCAGGAGATGTCTGCTGTCTTCGGCGTACACAGACCCTGCTGTTTGGGAGCAGAGACCCAAAGATGCACAGGACCTAAGTCAGCTGGCGTCTCTGATGGACAGAACGTATGAGAGGAAGTTTCCCGTCAGCTCTTTGGTCATTTCCAGGTTCATAGATAATTTATCATCAAAAGAGGAGGTGGATCAAGCCCAATATTACCTGTATAAGTTTCGTCACAGTCCAAACTGCTGGTATCTTCGGGACTGGACCGTTCACAGCTGGATCCGACATTGTCTTAAATACAGCGCCAGAGATAAAGCCCTCTACACGCTGAAGAACAAGGTTCAGTTCGGCATGTTTCCCGATGACTTCACCTTCAATCTTCTGATCGACTCCTTCATAAAAGACCAGGACTTTAAAGGAGCCTGTTCGGTGGTGGAGGAAGTGATGCTTCAGGAGTCGTTTGAGCGAATCTCCACGCAGATCCTGTCGCTTCACGCCCTCAGCAGGTACCTGGCGACCGAGCCCCACCTCgggTGGGAGGAGGAGAGGAACCTGGGAGCGTGTCTGATGCTGGCCGGACTCAAGCAGGAGAACTCCGTCGGCTTCAGCGCTCGTCTGCTGGGATTGGCTCTCATCGGTAAAGTGGAGCTGTCCCGAGGGATTCACGCCGTGTTTCACAAGATGCCCCTGATCTGGACCTCGGGTTATCTCGGGCGAGCCCTGGCCGTCATGAGCGCCGCGTGCGACTTCAGAGACGTCAAGATATCTGAGGAAGTCCTGGCCCGCGTGGAGAAGATCTTGCAGGATCTCTCAGAGAACGTCTCCGACTCGCCGCCGGAGGAAGACGACGCGCTGGAGGCACGCAAGCTACCGGAGTACGTCAGCCGCTTCGAGGAGCTGAAGGAGCGCCTGGTGTCTCGGGACCGGACCGACTCGAGGAGTCTGGAGTCCCTGGCGTCGTCTCTGACGGGGAAGGCGCTGGCGGCGTGTGAAGACGCAGACCTGGCCGAGTACCAGCGGACGCTGAAGGACTGGGAGTCCGAGCGGCAGCAGCTCATTCTCAGGGAAAGAGAGACGAGGGAGAAGAACCAGAAGAGCGTCTGAGCAGACCGCGTCCTGCAGACAGAGCATTGTTTGTCGTGTTTATTGTCTTTGGTTGGGTCGGTCGAGATAGAGGTTTGTGTGTTAATATTATTGGGATTCTTTTTCAACGCCCTGTAAGTCCGAGcggtataaataaacaatgaaaatactCTTTTA
>XM_043246127.1
CAGGGTGAGCGTAGAAGCGCGAGGCTTTGGTTTGCACTTTAGCCGCGCGAGGAGGTGAAGGAAAGCCAGGAGATGTCTGCTGTCTTCGGCGTACACAGACCCTGCTGTTTGGGAGCAGAGACCCAAAGATGCACAGGACCTAAGTCAGCTGGCGTCTCTGATGGACAGAACGTATGAGAGGAAGTTTCCCGTCAGCTCTTTGGTCATTTCCAGGGTCAGAGAGGATTTTACATGGCGTTTTAAACATATAGTGCACTGCATTCACACGGAGGACTCTGctgctcgtTTCATAGATAATTTATCATCAAAAGAGGAGGTGGATCAAGCCCAATATTACCTGTATAAGTTTCGTCACAGTCCAAACTGCTGGTATCTTCGGGACTGGACCGTTCACAGCTGGATCCGACATTGTCTTAAATACAGCGCCAGAGATAAAGCCCTCTACACGCTGAAGAACAAGGTTCAGTTCGGCATGTTTCCCGATGACTTCACCTTCAATCTTCTGATCGACTCCTTCATAAAAGACCAGGACTTTAAAGGAGCCTGTTCGGTGGTGGAGGAAGTGATGCTTCAGGAGTCGTTTGAGCGAATCTCCACGCAGATCCTGTCGCTTCACGCCCTCAGCAGGTACCTGGCGACCGAGCCCCACCTCgggTGGGAGGAGGAGAGGAACCTGGGAGCGTGTCTGATGCTGGCCGGACTCAAGCAGGAGAACTCCGTCGGCTTCAGCGCTCGTCTGCTGGGATTGGCTCTCATCGGTAAAGTGGAGCTGTCCCGAGGGATTCACGCCGTGTTTCACAAGATGCCCCTGATCTGGACCTCGGGTTATCTCGGGCGAGCCCTGGCCGTCATGAGCGCCGCGTGCGACTTCAGAGACGTCAAGATATCTGAGGAAGTCCTGGCCCGCGTGGAGAAGATCTTGCAGGATCTCTCAGAGAACGTCTCCGACTCGCCGCCGGAGGAAGACGACGCGCTGGAGGCACGCAAGCTACCGGAGTACGTCAGCCGCTTCGAGGAGCTGAAGGAGCGCCTGGTGTCTCGGGACCGGACCGACTCGAGGAGTCTGGAGTCCCTGGCGTCGTCTCTGACGGGGAAGGCGCTGGCGGCGTGTGAAGACGCAGACCTGGCCGAGTACCAGCGGACGCTGAAGGACTGGGAGTCCGAGCGGCAGCAGCTCATTCTCAGGGAAAGAGAGACGAGGGAGAAGAACCAGAAGAGCGTCTGAGCAGACCGCGTCCTGCAGACAGAGCATTGTTTGTCGTGTTTATTGTCTTTGGTTGGGTCGGTCGAGATAGAGGTTTGTGTGTTAATATTATTGGGATTCTTTTTCAACGCCCTGTAAGTCCGAGcggtataaataaacaatgaaaatactCTTTTA
>XM_043246128.1
GAACGGCGTCATCACGTCTCCAGGAGATGTCTGCTGTCTTCGGCGTACACAGACCCTGCTGTTTGGGAGCAGAGACCCAAAGATGCACAGGACCTAAGTCAGCTGGCGTCTCTGATGGACAGAACGTATGAGAGGAAGTTTCCCGTCAGCTCTTTGGTCATTTCCAGGGTCAGAGAGGATTTTACATGGCGTTTTAAACATATAGTGCACTGCATTCACACGGAGGACTCTGctgctcgtTTCATAGATAATTTATCATCAAAAGAGGAGGTGGATCAAGCCCAATATTACCTGTATAAGTTTCGTCACAGTCCAAACTGCTGGTATCTTCGGGACTGGACCGTTCACAGCTGGATCCGACATTGTCTTAAATACAGCGCCAGAGATAAAGCCCTCTACACGCTGAAGAACAAGGTTCAGTTCGGCATGTTTCCCGATGACTTCACCTTCAATCTTCTGATCGACTCCTTCATAAAAGACCAGGACTTTAAAGGAGCCTGTTCGGTGGTGGAGGAAGTGATGCTTCAGGAGTCGTTTGAGCGAATCTCCACGCAGATCCTGTCGCTTCACGCCCTCAGCAGGTACCTGGCGACCGAGCCCCACCTCgggTGGGAGGAGGAGAGGAACCTGGGAGCGTGTCTGATGCTGGCCGGACTCAAGCAGGAGAACTCCGTCGGCTTCAGCGCTCGTCTGCTGGGATTGGCTCTCATCGGTAAAGTGGAGCTGTCCCGAGGGATTCACGCCGTGTTTCACAAGATGCCCCTGATCTGGACCTCGGGTTATCTCGGGCGAGCCCTGGCCGTCATGAGCGCCGCGTGCGACTTCAGAGACGTCAAGATATCTGAGGAAGTCCTGGCCCGCGTGGAGAAGATCTTGCAGGATCTCTCAGAGAACGTCTCCGACTCGCCGCCGGAGGAAGACGACGCGCTGGAGGCACGCAAGCTACCGGAGTACGTCAGCCGCTTCGAGGAGCTGAAGGAGCGCCTGGTGTCTCGGGACCGGACCGACTCGAGGAGTCTGGAGTCCCTGGCGTCGTCTCTGACGGGGAAGGCGCTGGCGGCGTGTGAAGACGCAGACCTGGCCGAGTACCAGCGGACGCTGAAGGACTGGGAGTCCGAGCGGCAGCAGCTCATTCTCAGGGAAAGAGAGACGAGGGAGAAGAACCAGAAGAGCGTCTGAGCAGACCGCGTCCTGCAGACAGAGCATTGTTTGTCGTGTTTATTGTCTTTGGTTGGGTCGGTCGAGATAGAGGTTTGTGTGTTAATATTATTGGGATTCTTTTTCAACGCCCTGTAAGTCCGAGcggtataaataaacaatgaaaatactCTTTTA

Function

symbol description
mrps27 Predicted to be active in mitochondrion. Is expressed in several structures, including head; immature eye; neural plate; pectoral fin bud; and segmental plate. Orthologous to human MRPS27 (mitochondrial ribosomal protein S27).

NR:

description
28S ribosomal protein S27, mitochondrial-like

GO: NA

KEGG:

id description
K17406 MRPS27; small subunit ribosomal protein S27

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246125.1 True 1445 mRNA 0.55 11 652589 658219
XM_043246126.1 False 1372 mRNA 0.55 11 652590 658219
XM_043246127.1 False 1381 mRNA 0.54 11 652770 658219
XM_043246128.1 False 1335 mRNA 0.54 11 652837 658219

Neighbor

gene id symbol gene type direction distance location
znf366 znf366,LOC107726882,LOC107573350,LOC107704577,LOC108430334 coding upstream 4286 635423 ~ 648303 (+)
smyd1b smyd1b,LOC107712675,LOC107569675,LOC107661523,LOC108430330 coding upstream 24072 613544 ~ 628517 (+)
znf367 znf367,LOC107726881,LOC107704585,LOC107568105 coding upstream 95209 553073 ~ 557380 (+)
prxl2c aaed1 coding upstream 115439 534683 ~ 537150 (+)
ptger4a ptger4a,LOC107661536,LOC107569669,LOC107704591,LOC107726867,LOC107661538 coding downstream 6412 664631 ~ 669531 (+)
loxhd1b loxhd1,loxhd1b,LOC108430301,LOC108265797 coding downstream 14651 672870 ~ 711338 (+)
mfsd14bb si:ch211-87m7.2,LOC108430319,LOC103035659,LOC108265778,LOC107697580,LOC107726864 coding downstream 89192 747411 ~ 759368 (+)
LOC122350985 NA coding downstream 123605 781824 ~ 784101 (+)
zgc:101664 NA coding downstream 128220 786439 ~ 788658 (+)
G59756 NA non-coding upstream 8021 567295 ~ 644568 (+)
G59761 NA non-coding upstream 21243 629672 ~ 631346 (+)
LOC122350371 NA non-coding upstream 44582 599711 ~ 608007 (+)
G59735 NA non-coding upstream 86759 562860 ~ 565830 (+)
G59656 NA non-coding upstream 390009 159691 ~ 262580 (+)
G59801 NA non-coding downstream 97116 755335 ~ 766628 (+)
G59815 NA non-coding downstream 215669 873888 ~ 874199 (+)
G59811 NA non-coding downstream 289458 947677 ~ 950973 (+)
G59825 NA non-coding downstream 299004 957223 ~ 958231 (+)
G59824 NA non-coding downstream 300460 958679 ~ 960171 (+)
cdc14b cdc14b,LOC107661524,LOC107704583,LOC107568104,LOC107726879,LOC107570987 other upstream 101902 537775 ~ 550687 (+)
G59807 NA other downstream 145434 803653 ~ 804839 (+)
znf608 znf608,LOC107574328,LOC107697597,LOC107712568,LOC107704598,LOC107573349,LOC107726216 other downstream 183858 842077 ~ 852004 (+)
pggt1b pggt1b other downstream 552596 1210815 ~ 1218804 (+)
G60259 LOC107560031,LOC107559593,LOC108412499,LOC107754396 other downstream 1257241 1915460 ~ 1918371 (+)
polb polb,LOC107670984,LOC107722860 other downstream 1356640 2014859 ~ 2020034 (+)

Expression


Co-expression Network