tmem9 (tmem9,LOC107707676,LOC107669678,LOC107711977,LOC107679355)


Basic Information

Item Value
gene id tmem9
gene name tmem9,LOC107707676,LOC107669678,LOC107711977,LOC107679355
gene type coding
species tiger barb (Puntius tetrazona)
category of species ornamental fish

Chromosome Information

Item Value
chromosome id NC_056706.1
NCBI id CM032075.1
chromosome length 24299999
location 12518002 ~ 12522583 (+)
genome version ASM1883169v1_2021_tiger_barb_Genome

Sequence

>XM_043246574.1
tataaaataataataataacgctTTTAATTTGCCTTTTACCGTGGAGTTCATCCATCGTCACGTGACGCAGTAATACTCCAGAACTTCCGGAGAAAGTCAACATATGTTTGATGGGCGTTTATAAACATCACAGGTATGTCGTCCAGCGTCGCACGAAATCTCCGGATAGCAGCTGTCCTTCTggtgtttcttgtttttatagATGTGATTTCACTCGCATATGCAGATAAGAGTTATGAAGATGTGCGTTGCAAGTGCATCTGTCCCCCCTACAGAAACATCAGCGGACACATCTACAAAAAGAATGTGTCCCAGAAAGACTGTAATTGTCTTCACGTGGTGGAGCCCATGCCAGTGCCTGGCCATGATGTGGAGGCCTACTGTCTGCTTTGTGAGTGCAAGTATGAAGAACGGAGCAGCAACACCATTAAGGTGACCATTATAATCTACTTGTCTGTGGTTGGAGCTCTTCTGCTGTATATGCTGTTCCTACTTCTAGTTGATCCTCTAATCCGCAAACACGATCCTTACACCATGCCACTGCAGAACGAGGAGGATTCTGagGATGTGAGGCCTCGTGTTGATGGTTCACAAGGTCGTGGGAACACTGTCTTGGAGAGGGTAGAGGGAGCTCAGCAGCGCTGGAAGAAACAGGTCCAGGAGCAGCGCAAGACTGTTTTTGACCGCCACAAACTCCTCAGCTAAGATCTCAGATGGGCTTCAGCTGGGAAAAAAATCTACTGGGCTCCACTGACTGAGACAACTTGCATGGTGGTCTTATAGTTTCAGCTTTTGACAATATGTTTTATCAGTGGGCCTGCATTATCGTTAGTATTATAATCTTACCAAGACTGACTTGGTTAATTCCAGCTTTCAAACTAAAACTGTGAATACATAAAGCAACATATTAAAGTTGTTTGCGGTTAACATAGACATAAATGAAGAGAATCCGTCTGCTCCAGTTGGTCTCACAAACGCAGTCACCTTTACATTTCTCACACAATACTTGGAATATATATATCGGTGCTGTGCTTTGAAATAGATGAGATTACATGGATGTATGCTGTGTGATCTGGGGGTACTGATGTGaacatgtttaataatataGATGCTCTTATCAAGATGTCGTTGCACTGTTGTAGTTTCACTTTGAAttgccaaaaaatatattgaacagttcttatttatttatttatttgcaagcTGATAATATCATTCAGGATAGCACATGTCACAATCATATGTTTTAAATGGCAGATTATAATGGATAATTAGAAACAAATtaatgttgtcaaatgattaagcatgattaaaagcatttctttttttaatgtatgtgtatattcatgtatatataaatacaaacacatacttgtataaattaaatatacattatatatatatatatatattataaaatttaagaatgtgaatataaaagtaaatattttcaaaatatatactgtatgtgtgtgtatttatatataaatatgtattcataAAACCTCTTTTTTTCATCACTATTAAGTGATCAGCACTGTTGAATAGTATATCACAAGCTCACAAGCTTCCTCTAATATGCTGGACACTTTTCTGATTCATAGACATTCAGAAATATTGATTTTGCACTTGAAAATGTGAAGGAATTTGAAGGACTTTGCTTGACGATCGTATTTGCTGCTGTAATCATTTTCCTGTATGTATCCAAACAACTTGCAGCTGTTTTACAGCTGAAATATTCTTGCTTatgtgaaaatgcattaaaatattaaatatataaagaatgtCGGCAA

Function

symbol description
tmem9 Predicted to be located in lysosomal membrane. Predicted to be integral component of membrane. Orthologous to human TMEM9 (transmembrane protein 9).

NR:

description
PREDICTED: transmembrane protein 9

GO:

id name namespace
GO:0016021 integral component of membrane cellular_component

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
XM_043246574.1 True 1794 mRNA 0.37 6 12518002 12522583

Neighbor

gene id symbol gene type direction distance location
si:ch211-167b20.8 LOC107669633 coding upstream 6247 12503114 ~ 12511755 (+)
wasa LOC107669662,LOC107731143,LOC107711966,LOC107680068 coding upstream 54950 12455870 ~ 12463052 (+)
slc38a5a LOC107711969,LOC107679283,LOC107591803,LOC107669663,LOC107550502,LOC107731258 coding upstream 66052 12440518 ~ 12451950 (+)
tmem81 tmem81 coding upstream 88160 12427930 ~ 12429842 (+)
si:dkey-183p4.10 NA coding upstream 175539 12337773 ~ 12342463 (+)
cacna1sb cacna1sb,LOC107669632,LOC107707674,LOC107679379,LOC107591792,LOC107550462 coding downstream 270 12522853 ~ 12541148 (+)
tmem115 tmem115,LOC107711974,LOC107679556,LOC107669665,LOC107550514,LOC107591784 coding downstream 60367 12582950 ~ 12586586 (+)
rhoab rhoab,LOC107591788,LOC107679616,LOC107556503,LOC108265880,LOC108425062 coding downstream 65687 12588270 ~ 12592390 (+)
sema3h sema3h,LOC107669646,LOC107591773,LOC107717498 coding downstream 73366 12595949 ~ 12612593 (+)
borcs6 LOC107717508,LOC107669648,LOC107556497,LOC107711970,LOC107679501,LOC107591781 coding downstream 91395 12613978 ~ 12619607 (+)
G63218 NA non-coding upstream 190064 12240641 ~ 12327938 (+)
G63204 NA non-coding upstream 328523 12180187 ~ 12189479 (+)
G63207 NA non-coding upstream 378592 12131897 ~ 12139410 (+)
G63195 NA non-coding upstream 462755 12055042 ~ 12055247 (+)
LOC122350249 NA non-coding upstream 463650 12052582 ~ 12054352 (+)
LOC122350247 NA non-coding downstream 25161 12547744 ~ 12570426 (+)
G63534 NA non-coding downstream 117493 12640076 ~ 12640617 (+)
G63538 NA non-coding downstream 208472 12731055 ~ 12732041 (+)
G63552 LOC107556489,LOC107717529,LOC107591772,LOC107711952 non-coding downstream 292382 12814965 ~ 12892529 (+)
G63665 kazna,LOC107711950,LOC107591771,LOC107669642,LOC107680131,LOC107717500,LOC107556484 non-coding downstream 430005 12952588 ~ 12953461 (+)
G63453 NA other upstream 26078 12490260 ~ 12491924 (+)
lamtor5 lamtor5,xip,LOC107668015,LOC106566397 other upstream 457805 12057657 ~ 12060197 (+)
LOC122350223 NA other upstream 467034 12047509 ~ 12050968 (+)
si:ch211-163l21.10 LOC107731153,LOC107549947,LOC107668018,LOC107745734 other upstream 660581 11853594 ~ 11857421 (+)
fance LOC107731142,LOC107668098,LOC107549969,LOC107678824,LOC107745739,LOC107591838,LOC107577385 other upstream 697343 11817057 ~ 11820659 (+)
G63533 NA other downstream 115647 12638230 ~ 12638565 (+)
LOC122350405 LOC107556500,LOC107717521,LOC107669623,LOC107679608,LOC107591846 other downstream 221595 12744178 ~ 12747558 (+)
zgc:136971 zgc:136971,LOC107717528,LOC107669673,LOC107556470 other downstream 299451 12822034 ~ 12833000 (+)
G63676 NA other downstream 484839 13007422 ~ 13008830 (+)
kcnd3 kcnd3,LOC107711847,LOC107556323,LOC107594524,LOC107679777,LOC107669639 other downstream 917692 13440275 ~ 13522536 (+)

Expression


Co-expression Network