Gene
RNA
| Item | Value |
|---|---|
| gene id | G31758 |
| gene name | NA |
| gene type | non-coding |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000004 |
| NCBI id | null |
| chromosome length | 17451736 |
| location | 11900321 ~ 11931138 (+) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU35998 | False | 1268 | lncRNA | 0.39 | 3 | 11900321 | 11931138 |
| TU35999 | True | 1149 | lncRNA | 0.41 | 2 | 11900321 | 11931138 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000004_11897082_11898506 | MYCB | coding | upstream | 1106 | 11896232 ~ 11899215 (+) |
| CI01000004_11863724_11890961 | NA | coding | upstream | 9207 | 11863724 ~ 11891114 (+) |
| CI01000004_11776595_11786233 | STARD3NL | coding | upstream | 113404 | 11776419 ~ 11786917 (+) |
| CI01000004_11771176_11773391 | EPDR1 | coding | upstream | 126805 | 11771089 ~ 11773516 (+) |
| CI01000004_11750356_11765031 | RANBP9 | coding | upstream | 134217 | 11749765 ~ 11766104 (+) |
| CI01000004_12033980_12034384 | NA | coding | downstream | 102518 | 12033656 ~ 12034402 (+) |
| CI01000004_12222833_12223126 | NA | coding | downstream | 290788 | 12221926 ~ 12223244 (+) |
| CI01000004_12331486_12332789 | NA | coding | downstream | 399702 | 12330840 ~ 12332997 (+) |
| CI01000004_12353073_12362622 | KLHL18 | coding | downstream | 421822 | 12352960 ~ 12362716 (+) |
| CI01000004_12362858_12363136 | NA | coding | downstream | 431669 | 12362807 ~ 12363136 (+) |
| G31785 | NA | non-coding | upstream | 4192 | 11895853 ~ 11896129 (+) |
| G31625 | NA | non-coding | upstream | 96594 | 11790997 ~ 11803727 (+) |
| G31737 | NA | non-coding | upstream | 151560 | 11748525 ~ 11748761 (+) |
| G31727 | NA | non-coding | upstream | 193351 | 11706584 ~ 11706970 (+) |
| G31723 | NA | non-coding | upstream | 204041 | 11694387 ~ 11696280 (+) |
| G31764 | NA | non-coding | downstream | 221 | 11931359 ~ 11932195 (+) |
| G31762 | NA | non-coding | downstream | 1249 | 11932387 ~ 11934446 (+) |
| G31778 | NA | non-coding | downstream | 19855 | 11950993 ~ 11951357 (+) |
| G31769 | NA | non-coding | downstream | 22233 | 11953371 ~ 11954914 (+) |
| G31773 | NA | non-coding | downstream | 63758 | 11994896 ~ 12000711 (+) |
| CI01000004_11666900_11667179 | NA | other | upstream | 232662 | 11666900 ~ 11667659 (+) |
| G31710 | NA | other | upstream | 257921 | 11637251 ~ 11642400 (+) |
| G30797 | NA | other | upstream | 1402533 | 10497376 ~ 10497788 (+) |
| CI01000004_08976512_08980033 | TTPA | other | upstream | 2919337 | 8976254 ~ 8980984 (+) |
| G28859 | NA | other | upstream | 3300718 | 8599235 ~ 8599603 (+) |
| G31865 | NA | other | downstream | 260992 | 12192130 ~ 12197418 (+) |
| CI01000004_12646972_12652534 | NA | other | downstream | 711616 | 12646838 ~ 12652570 (+) |
| CI01000004_14036114_14036449 | KIAA0040 | other | downstream | 2092409 | 14035393 ~ 14039142 (+) |
| CI01000004_15091390_15096502 | GA45B, GADD45B, GADD45BB | other | downstream | 3160106 | 15091200 ~ 15097173 (+) |
| G34220 | NA | other | downstream | 4008219 | 15939357 ~ 15939950 (+) |
