CI01000005_00278622_00282152


Basic Information

Item Value
gene id CI01000005_00278622_00282152
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 278439 ~ 282469 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_00278622_00282152.mRNA
AGATTCCTCTTTTTAAGCTGGTTGGAACACTTGAAATTCTGCATCAGGCATATTTGTAAAACAGAGCAGATTGTCCCTTTCAACTGAGCCATGACAGTCATGGAGCACTCTCCAGAGTTTCCCCCCAGTGTGCTATGAATGTGTGCTGTGCCAACAATCTGTCTGTTGTCATGCACTATTGAGAGCGCTCGGGCACAGAGAATAGCCTGAAATAAGGCACAGAACAAGCTATTATCTCTAATCTTTAATGTTTTACCCCAATTAACTGAATACTGTGAGTGCCACAAGACCTTTGTCATGCACATGTACCCAGCGCAATGAAGTTGAAGACATTTGTGCGCTGGAGGAGGCCTGTCGCAGTGTTGAGATATAAGATATGCCGACTGCAGCAACATCTCTCTGCTGGGGAACATCAGCAGGACCTGTTCCAGAAGGAGCTGCCCATGTTTGTTTCCCCACACTCCCAGCCCCCCTGCAGCAGCCTAACAGAACTCATTCAGCTGTGTGGAGGAACTGTGTGTCGGAGTGTGCGGCAGGCCGGAATCTGTATTGGGGAGTATAATGGCAAGAAACCAGAGGGGAGCCTCAGTCTTTCTGAACAGTGGATTTTAGGTAAGATGGCCTATTGATGATAAAGATGACCAAGGAGTGATGTATTATCACCATAACGCACCCTAACCAAAATCCATGTGTGCAACACTTTGACAAGGGCTGAATAGGACTATTAGCTTTGTTTAGAATGAAATACTAGCACACTGCTTTGCTACAATAGTAATGTTTTTTAATAGTGCTGTATGTGAAACAATATTAAA

Function

NR:

description
Zgc:136403

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_00278622_00282152.mRNA True 812 mRNA 0.45 2 278439 282469

Neighbor

gene id symbol gene type direction distance location
CI01000005_00134161_00235512 AGPAT5 coding downstream 42927 134161 ~ 235512 (-)
CI01000005_00006610_00010194 NA coding downstream 268245 6610 ~ 10194 (-)
CI01000005_00000944_00006561 NA coding downstream 271878 944 ~ 6561 (-)
CI01000005_00358864_00426242 NA coding upstream 76379 358848 ~ 426997 (-)
CI01000005_00461483_00481276 NA coding upstream 178291 460760 ~ 481784 (-)
CI01000005_00596581_00598577 NA coding upstream 313698 596167 ~ 598577 (-)
CI01000005_00700274_00704932 NA coding upstream 417005 699474 ~ 704932 (-)
CI01000005_01250101_01298320 MYOM2 coding upstream 966369 1248838 ~ 1298320 (-)
G35735 NA non-coding downstream 21952 256277 ~ 256487 (-)
G35733 NA non-coding downstream 23210 254999 ~ 255229 (-)
G35699 NA non-coding downstream 28879 223127 ~ 249560 (-)
G35697 NA non-coding downstream 44873 230744 ~ 233566 (-)
G35694 NA non-coding downstream 162506 114384 ~ 115933 (-)
G35829 NA non-coding upstream 273780 556249 ~ 572411 (-)
G36012 NA non-coding upstream 646207 928676 ~ 929490 (-)
G36021 NA non-coding upstream 661699 944168 ~ 946077 (-)
G36049 NA other upstream 738826 1021295 ~ 1043672 (-)
G36628 NA other upstream 1380798 1663267 ~ 1664279 (-)
CI01000005_01883894_01899867 NA other upstream 1600785 1883222 ~ 1899867 (-)
G38510 NA other upstream 3922376 4204845 ~ 4206208 (-)
G38415 NA other upstream 4098769 4381238 ~ 4401110 (-)

Expression


Co-expression Network