CI01000005_00700274_00704932


Basic Information

Item Value
gene id CI01000005_00700274_00704932
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 699474 ~ 704932 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_00700274_00704932.mRNA
ATGGATCTGCTGCAAGCTAAATGCCGTCTGGAGCGGACCTTCAGAGATGCATGTATCATCGCCCTGACAGAAACCTGGCTCGATGGGACCACCCCTGATTCAGAGGTCAGTCTCGATCACTTTACCATACTACGAGCTGACAGGACACGCAAGTCTGGAAAGAATAAGGGTGGTGGTGTCTGCATCTTCGTTAACAAGCGATGGTGTGTTAACATCAAAAAACACCTTTCAATCTGTACACCTGATGTAGAGCTATTGACTCTGTCTCTGCGGCGGTATTATCTCCCGAGGGAATTCCCATGCGTGGTGATCAGCTGTGTTTACATCCCCCCTAGTGCTAACACCAGGATAGCAGCAGATCTATTAGCCGAGGATGCTAGCTCTATGATGGCTAAATATCCTGATGCCCTGCTGTTTATTTTGGGGGATTTTAACAACTGTAAACTGGGCAGTGTTATGCCATCGCTGCACCAGTATGTGAATATTCATACGAGGAGGCATAACACCTTGGATTTATGTTATGGGAACATTTCCGATGCATTTACCGCTCAGGCACAGCCTCCACTCGGCTACTCTGACCACAATGTTGTCGTTCTGTTGCCGCACTACAGATCAGAGCTGAAACGCGCTAAGCCAACCATACATAGCGCCTCCATCTGGTCGGAGGATGCCATGGCACAGCTGCAAGGTTCACTAGCGTGTACAGACTGGGAGATTTTTCAGGGAGACTTGGAGCATAAGGACAAGATCGAGCAAGAATTCAGCAGTATGAATACTAAACAAGCGTTTCAGAAAATCAAGATTCTTACTGGTCAAGCATCTAGCACAGGGCATTATGCAACATCTGACCCGGCTACCTTTGCTGACTCTCTGAATTCCTTTTATACCTGTTTTGACAGACATGACCATTCTGCCCTCTGTGAAGAGGTGCTCAGTGCCCTGTCACCAGTTGTTCCATCCGAGCCCCCATTTACAGTGGAGGATGTACGCCAGCAATTGAGCAGGTGTAAAGTGGGCAAGGCACCAGGTCCAGATGGCATTCCGGCCAGGGGAAGCACACATTGTTACAATCTGAAAAACAATCATTCTGGTTCCCAAGAAGCCCCGTCCATCCGAGCTAAACCATTATCGACCCGTCGCACTTACTTCAATAATAATGAAGTGCATGGAAAAGCTAATTCTTTACACCATCCTTCCAGCAGTCAGACCTCTGCTGGACCCCTACCCGTTCGCCTACAGGGCCAGGCGGGGAACAGAGGATGCCGTGGCATGTCTCTCCACCCCCTTCTACAACATCTGGAATCACCTGGCACCTTTGCATCCATCCTGTTCATCGATTTCAGCTCAGCTTTTAATACAATACAACAGCATCAACTGATTAAAAAGCTCCAATTTCTTAACCTATCTCCACTTCTCATCCACTGGATTTACAACTTTCTCAGTAATAGACTACAGGCCGTTAGAGTGGGCTCAGTCACCTCCTCAATTATAACAATAACTCCATTACGGCTTACCATCAGTCTGTCATTCACTTTACTAAGTGGTGCTCCGAAAATAGTCATTAGTACAGAGTTATTAATTTACACCCACTCACATATTCTAGATTTGGCCCCCATCATCATATATGACAAAACAGTGGAACATGTCAATCATTTTAAATATCTTGGACTCACATTAGATAATAAACTCACCTTCGAACAACATGTCACAGATATATATAAACGTTCCCAACAAAGACTCCACATTCTCTGCAAGCTTCATGCCCTTTCTGTCACTCCACATCTTCTGTTACTGTTGTACACTAGCATCATCCAATCCACTCTCCTCTACTGTTCCCTTTGTTACTTCAGCATGCTCTCCATCACCAATAGAAATAAGCTCATTACGGTCACATGCACAGCATCCAAAATTATCAGTTTACCCATTACGGATCTATTTCTTCTCAACAGCAAAGCTGTCACACGCATGGCTCGGACAAGTGTGGCCAAAGAATTCATGGATGCTTTTTCTTGTAAGGCACTACCAACTCAAACACTGGCACATGACCAGACCTACCAGTCATCTACATATACAGTGTGTGTACTTTCAAGACTAAAGAGAGGAGATAATGTGGAGTGGCAGACCAGTGGGGTACATGTTGGTCTCCACGAGGCGATGTTTGAAGCTGGAGGCCTGGATTCAATGGTGGATTTGGCTGTAGTGATGGAGGAAGAAGTTCTCAAACAACCTTGCAGACCTTCTATCTTTGGTGTGCTTTACGAACTGCTTAATTTTCTTTATATTGAGTATCCCAAACAACGGTAGTAACTTTTTGAAGTTGTGTCACAATGCCAAATAATATATAGTTGTTGTTTTTTAATACTTATAAAATAGCCGTGACACCATTTTGTCACTACCCAACATGATTCTTCGTTCTTGTTTTTACTGTACTTGAGTATGGCCTGTATGATATCAAATGGAATTTTTGTGTTGTTTTTACTATTTAAAATGTGCTTTATTGCTTTCAGTTCATGGAAATATTAATAAATGTTTAGAGAAATGTACGGAGCCCCGCACATGACATGCAAGAAAACAAATTAAATCGTGCGCACGATTTACTAATCCGTTCCCTCGATTTACTAAATCGTGCGCACGATTTGCTATTTCGTTCCCTCTATTTATAAATCATGAGCATGATTTATAAATCGAGGGAATGAAATAGTAAATCATGCGCACGTTTTAGTAAATCGAGGGAACGAAATATAAATTGTGCGCACGTTTTAGTAAATCGAGGGAACAAATTAATAAATCGTGCGCACGATTTAGCCTACTATTTTTTTCCTGCATGTCATGTCCGGGGCTCCATAGAAATGTCATGAAATTCAGTACATTTAAATTTCTTAGTATAAAAAAAAAAACTGTAACACCTGATTTATTTTTGCTGACTTTAAGATGAGAGAGAAACAAGTCCAAACAAAAATAACCAGCTGTTACAGTACTAAAAAATCCACTGATATCATTTGTGGCATTTTAAATGAAATGTTTTCCATGAAATGTCTCTATATATTTACAAATATTACTACAACCAATTGTAGTGATTGTTCACAAATTAATTACAAATTAAA

Function

NR:

description
ReO_6

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_00700274_00704932.mRNA True 3104 mRNA 0.42 6 699474 704932

Neighbor

gene id symbol gene type direction distance location
CI01000005_00596581_00598577 NA coding downstream 100897 596167 ~ 598577 (-)
CI01000005_00461483_00481276 NA coding downstream 217690 460760 ~ 481784 (-)
CI01000005_00358864_00426242 NA coding downstream 272477 358848 ~ 426997 (-)
CI01000005_00278622_00282152 NA coding downstream 417005 278439 ~ 282469 (-)
CI01000005_00134161_00235512 AGPAT5 coding downstream 463962 134161 ~ 235512 (-)
CI01000005_01250101_01298320 MYOM2 coding upstream 543906 1248838 ~ 1298320 (-)
CI01000005_01648294_01654249 OIT3 coding upstream 943059 1647991 ~ 1654249 (-)
CI01000005_01674196_01674495 NA coding upstream 968507 1673439 ~ 1674495 (-)
CI01000005_01677318_01687512 MCU coding upstream 972229 1677161 ~ 1687599 (-)
CI01000005_01723641_01729676 NA coding upstream 1018406 1723338 ~ 1730336 (-)
G35829 NA non-coding downstream 127063 556249 ~ 572411 (-)
G35735 NA non-coding downstream 442987 256277 ~ 256487 (-)
G35733 NA non-coding downstream 444245 254999 ~ 255229 (-)
G35697 NA non-coding downstream 465908 230744 ~ 233566 (-)
G36012 NA non-coding upstream 223744 928676 ~ 929490 (-)
G36021 NA non-coding upstream 239236 944168 ~ 946077 (-)
G36023 NA non-coding upstream 247245 952177 ~ 968609 (-)
G36033 NA non-coding upstream 268153 973085 ~ 994565 (-)
G36072 NA non-coding upstream 361941 1066873 ~ 1067248 (-)
G36049 NA other upstream 316363 1021295 ~ 1043672 (-)
G36628 NA other upstream 958335 1663267 ~ 1664279 (-)
CI01000005_01883894_01899867 NA other upstream 1178322 1883222 ~ 1899867 (-)
G38510 NA other upstream 3499913 4204845 ~ 4206208 (-)
G38415 NA other upstream 3676306 4381238 ~ 4401110 (-)

Expression


Co-expression Network