CI01000005_01648294_01654249 (OIT3)


Basic Information

Item Value
gene id CI01000005_01648294_01654249
gene name OIT3
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 1647991 ~ 1654249 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000005_01648294_01654249.mRNA
CCCTAGATCCCTGCTCAGCGTATATCAGTCTGAATGAACCATGGCGGAATACTGACTACCATGTCAACAACTCTGCGGGAGTCCCTCTGTGCGACCGGCATGTGGCGGGGGAATGGTATCGCTTTACAGGGATGGCTGGGGATGCTATGCCAACCTTCTGCATCGATGAGAACCACTGTGGTACCCATGCCCCCATCTGGCTGAATGGCAGTCACCCTCGGCCTAGTGATGGCGTTGTCACCCTACCTGCTTGTGCTAGCTTCAATAATAACTGCTGTCACTGGACAGCTAGTGTGGACGTAAAGGCCTGTGCTAAGGGTTACTACGTCTACCGCCTACCCCGACCCTCTGTCTGCTTCCACGTCTACTGTGGCCATTTCTATGACATATGCGATGAGGTTGAGTGTAATGGAGCAGACTGCCCTGTTGAGCCAGAATGCCGCTGTTCAGAGGGAACGGTTCTAGGACCTGATGCACAGACATGTCTGGATGTAAACGAATGTGAGAAAGGGAATGGAGGATGTGCAGAAGTATGCATCAACACCAAGGGCTCTCGTCGATGTGAGTGTGGACGAGGTAAAGTACTGGACGTAGACGGGAAGAGCTGTAAAGAGACTGAAGGATGTGACAATGTGAATGGAGGCTGTAGCCATGGATGCTCCTCAGAGGACGACTCATATAACTGTCACTGTCCCCGGGGTCTGACGTTGGGAGATGACAAACGGACCTGTCAGGTCCCTGTGCAGTGTGATCCTAGTTCCATAGAGGTTTCAGTTCCCAAAGACCTGGTGGGAGGACTTGAACTCTTCCTGTCTAACACTTCCTGCCGTGGCATTTCCAACGGCACTCACATTAACCTCCACTTTAGTCTGAAGACCTGTGGCACTGTGGTCCAGGTCATTGATGACAAAATCGTTGGCACCAACTTGGTGACAGGTTTGCCACGGTCTAGTCCCAGCAGCAATGGTGATTTGATCGTGCGCACCAGTAAACTACTGCTGCCAATTACGTGCGAGTTTCCACGGCAGTATGAAGTGTCAGATGGCTACCTGCCGAGTCTGCGCAACACAGCGCTGGAGTTAGCGGGCCACAGCGAAGGAATATTCCCCTTCAGTTTGGAGCTGTTTAAGAGCGCAGAATTTTCTGAACCGTACAACCAACCTCCTCAACTGCGGTTGCGTGATTCATTGTACTTCGGCGTTGAGCCTCGAGAGCGGGTGGATGGCCTTGCTGCTTTTGTAGAAAGCTGTTTTGCTACACCTGGCCCCAAGGCTGACCAGGCCTTAAAATATTACCTCATCAAAGATGGCTGCATTTCAGACGAAACAGTGCGTCAGCTTTCGGCTAAAGACCAGCTCTCCAAACACTACCAGGTCCCCGTCTTCAAGTTCATTGGCAAGGACAACCGAGAGGTGTTCCTGCATTGCCGTGTGCTGGTGTGTGGGCAGGCACAAGGGGAATCTCGCTGTACGCAAGGCTGCAGAAAGCGCTTGAGGCGACATCTCTGGACCGACCAGCACCAAGAGAAAGACGTTCTGTCTAGTGGACCCATTCGTATACTGCCAGACCCATGAGACCACACACATCTCTTACCTACATAAAGAAAACAACGCCATCTACAGGCTGCTTTACTTTATTTAAACACATCCAAACTGTATATCTACAGTAATCTTACATTTATGAGTAATATAAGGAGCATTTGTTAAAGTCTGTCTCATCTCACTTGCTTCCTTCCACTGCTTCTGACACAATATTAATATAAACCTCATCTACATGACCAAAAATATGCATCTACTGTAAGTGATGTTAACAGTATAAGCCTGAGCATTTTTTTAATATAGCTTAGAACATGAAACTGAGTAGCATTTTTTAATAAA

Function

symbol description
oit3 Predicted to enable calcium ion binding activity. Orthologous to human OIT3 (oncoprotein induced transcript 3).

GO:

id name namespace
GO:0005509 calcium ion binding molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000005_01648294_01654249.mRNA True 1877 mRNA 0.49 8 1647991 1654249

Neighbor

gene id symbol gene type direction distance location
CI01000005_01250101_01298320 MYOM2 coding downstream 349671 1248838 ~ 1298320 (-)
CI01000005_00700274_00704932 NA coding downstream 943059 699474 ~ 704932 (-)
CI01000005_00596581_00598577 NA coding downstream 1049414 596167 ~ 598577 (-)
CI01000005_00461483_00481276 NA coding downstream 1166207 460760 ~ 481784 (-)
CI01000005_00358864_00426242 NA coding downstream 1220994 358848 ~ 426997 (-)
CI01000005_01674196_01674495 NA coding upstream 19190 1673439 ~ 1674495 (-)
CI01000005_01677318_01687512 MCU coding upstream 22912 1677161 ~ 1687599 (-)
CI01000005_01723641_01729676 NA coding upstream 69089 1723338 ~ 1730336 (-)
CI01000005_01761513_01769840 NA coding upstream 106938 1761187 ~ 1769851 (-)
CI01000005_01883894_01899867 NA coding upstream 228973 1883222 ~ 1899867 (-)
G36620 NA non-coding downstream 7476 1640210 ~ 1640515 (-)
G36619 NA non-coding downstream 8073 1639699 ~ 1639918 (-)
G36614 NA non-coding downstream 30356 1617139 ~ 1617635 (-)
G36536 NA non-coding downstream 31687 1613131 ~ 1616304 (-)
G36567 NA non-coding downstream 101068 1546070 ~ 1546923 (-)
G36626 NA non-coding upstream 7719 1661968 ~ 1662172 (-)
G36630 NA non-coding upstream 10629 1664878 ~ 1665146 (-)
G36535 NA non-coding upstream 50969 1705218 ~ 1720596 (-)
G36631 NA non-coding upstream 113674 1767923 ~ 1768347 (-)
G36640 NA non-coding upstream 124624 1778873 ~ 1779086 (-)
G36049 NA other downstream 604319 1021295 ~ 1043672 (-)
G36628 NA other upstream 9018 1663267 ~ 1664279 (-)
G38510 NA other upstream 2550596 4204845 ~ 4206208 (-)
G38415 NA other upstream 2726989 4381238 ~ 4401110 (-)
G39515 NA other upstream 4179543 5833792 ~ 5834539 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location