G36536


Basic Information

Item Value
gene id G36536
gene name NA
gene type non-coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000005
NCBI id null
chromosome length 7630583
location 1613131 ~ 1616304 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>TU41500
TGAGCACGGTTGTTCAGGTCCAGCGCCCCTGTGGCCAGCAGTTCAGCCAGTTGCTTGCGGTTGCCGAAGTACAGAGCGAGGTCTGTAGCAATGATGGCCTTCCTGATGATCTCCAGCACCTGCTCATACTCACTGGAAGTCAGGTTGGAGAAAATATTGTGCCCTTCCTGCAGGATGGACACTGTCTGTGAAAAATGATGCTGTTCCATTGTGGATGTGGAATATAGGGCGGCCAGCGGATGGTCAAACTTCTGCAGATAACTGTTACTGTAGCCGCGGTGGTCCAGGTCATGACACAAGCAGGCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU41500 True 308 lncRNA 0.42 2 1613131 1616304

Neighbor

gene id symbol gene type direction distance location
CI01000005_01250101_01298320 MYOM2 coding downstream 314811 1248838 ~ 1298320 (-)
CI01000005_00700274_00704932 NA coding downstream 908199 699474 ~ 704932 (-)
CI01000005_00596581_00598577 NA coding downstream 1014554 596167 ~ 598577 (-)
CI01000005_00461483_00481276 NA coding downstream 1131347 460760 ~ 481784 (-)
CI01000005_00358864_00426242 NA coding downstream 1186134 358848 ~ 426997 (-)
CI01000005_01648294_01654249 OIT3 coding upstream 31687 1647991 ~ 1654249 (-)
CI01000005_01674196_01674495 NA coding upstream 57135 1673439 ~ 1674495 (-)
CI01000005_01677318_01687512 MCU coding upstream 60857 1677161 ~ 1687599 (-)
CI01000005_01723641_01729676 NA coding upstream 107034 1723338 ~ 1730336 (-)
CI01000005_01761513_01769840 NA coding upstream 144883 1761187 ~ 1769851 (-)
G36567 NA non-coding downstream 66208 1546070 ~ 1546923 (-)
G36494 NA non-coding downstream 110182 1442787 ~ 1502949 (-)
G36416 NA non-coding downstream 179254 1431829 ~ 1433877 (-)
G36486 NA non-coding downstream 182156 1430750 ~ 1430975 (-)
G36485 NA non-coding downstream 182724 1430153 ~ 1430407 (-)
G36614 NA non-coding upstream 835 1617139 ~ 1617635 (-)
G36619 NA non-coding upstream 23395 1639699 ~ 1639918 (-)
G36620 NA non-coding upstream 23906 1640210 ~ 1640515 (-)
G36626 NA non-coding upstream 45664 1661968 ~ 1662172 (-)
G36630 NA non-coding upstream 48574 1664878 ~ 1665146 (-)
G36049 NA other downstream 569459 1021295 ~ 1043672 (-)
G36628 NA other upstream 46963 1663267 ~ 1664279 (-)
CI01000005_01883894_01899867 NA other upstream 266950 1883222 ~ 1899867 (-)
G38510 NA other upstream 2588541 4204845 ~ 4206208 (-)
G38415 NA other upstream 2764934 4381238 ~ 4401110 (-)
G39515 NA other upstream 4217488 5833792 ~ 5834539 (-)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
striped catfish (Pangasianodon hypophthalmus) G54271 pde10a,LOC107754764 non-coding NC_047597.1 CM018543.1 28295936 ~ 28297769 (-)
bowfin (Amia calva) G51209 NA non-coding CM030126.1 CM030126.1 10558639 ~ 10563099 (+)