CI01000006_00363989_00372189


Basic Information

Item Value
gene id CI01000006_00363989_00372189
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 363989 ~ 372264 (+)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_00363989_00372189.mRNA
ATGAAACTGTTAAACTACTTACTGAAAGATGTCACGCACAAAATCGAATATTATTCAAGGTTTTCGCCCTCACCGATGTCAATCAAGCAATTCCTGGATTTTGGCAGGGAAAATGCATGTGAAAAAACCTCCTTCATGTTTCTGCGGAAAGAACTGGCAGTAAGGTTGGCCAATACGATGAGGGAAGTCAACCTGTTGCCCGTCAATCTTCAGAGCCAGCCATCCGTCAAACTGGTGGAGTCCTGGTACAGCCAGAGCTTTGAAGAGCTGTTAGACTATGAGAAAAGAAGTCCAGAGGATCCCCACACCCTTAATGATAGTAAAGAACTTGTTATTGCGGGCTTCAGCTTCTTAGAGATCCTGATTAAGATTCGGAACAGGCACAATGACGTGGTGCCCACCATGGCCCAGGGTGTCATCGAATATAAAGAGAAGTTTGGTTTCGACCCCTTCATCAGCAGCAATGTGCAGTACTTCCTTGACCGCTTCTACACCAATCGCATTTCTTTCCGAATGCTCATCAACCAGCACACTCTTCTGTTTGGCGATGCCACTTGTCTTGCACAACCAAAACACATCGGAAGCATCGACCCAGCCTGCAATGTGGCTGAGGTGGTGAGAGATGCATATGAGACAGCAAAGATGCTTTGTGAGCAGTACTACATGACAGCACCTGAACTGAAGATCGGGGAATTCAACTGTGAGAATAATTCCATGCGGGCAACGGTGGAGCTCTATGAAAACAACAGTGAGGGGCTTCCTCCAGTGAAAGCAATGGTTACTCTGGGAAAAGAAGACCTCTCCATAAAGATTAGTGACAACGGTGGGGGTGTCCCCTTACGAAAGATTGATCGTCTCTTCAATTATATGTATTCCACTGCCCCAACACCACGTCTGGACTCCTCTCAAGCTGCTGTCCCACTGGCTGGTTTTGGCTATGGACTGCCAATCTCTAGACTCTATGCACGCTACTTTCAGGGAGACTTGAACCTGTACTCGGTTGAAGGGTTCGGGACAGATGCAGTAATTCATCTTAAGGCTGTTTCCAGTGAATCTTTTGAGCGTCTTCCAGTCTTCAATAAGTCAGCATGGCGACATTACCAGACGGGTCCTGAGGCTGATGACTGGAGTAACCCGAGTAGTGACCCACGAGATGCATCCACATATAAAGCCAACAGATGACTTTATTATACCTGCTACAGTAACTAGTGATGAGCTGCTTACAGCTGCCAAGCTAATACTGAACACTGCCAGATA

Function

NR:

description
Pyruvate dehydrogenase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_00363989_00372189.mRNA True 1257 mRNA 0.47 10 363989 372264

Neighbor

gene id symbol gene type direction distance location
CI01000006_00315992_00319208 NA coding upstream 44603 315062 ~ 319386 (+)
CI01000006_00297085_00312816 CORO6 coding upstream 50934 297085 ~ 313055 (+)
CI01000006_00278488_00290221 SSH2B coding upstream 72285 278488 ~ 291704 (+)
CI01000006_00158417_00184263 OR115-7, OR115-2, OR115-9 coding upstream 179653 158357 ~ 184336 (+)
CI01000006_00143205_00144149 NA coding upstream 219447 142765 ~ 144542 (+)
CI01000006_00418370_00420217 SPAG16 coding downstream 46106 418370 ~ 420317 (+)
CI01000006_00423835_00428157 NA coding downstream 50829 423093 ~ 428369 (+)
CI01000006_00502041_00503898 NA coding downstream 129777 502041 ~ 504306 (+)
CI01000006_00537552_00548276 NA coding downstream 165188 537452 ~ 548591 (+)
CI01000006_00586425_00608567 NA coding downstream 213704 585968 ~ 609091 (+)
G40811 NA non-coding upstream 10026 353720 ~ 353963 (+)
G40800 NA non-coding upstream 58723 305007 ~ 305266 (+)
G40799 NA non-coding upstream 60762 303015 ~ 303227 (+)
G40797 NA non-coding upstream 64797 298960 ~ 299192 (+)
G40796 NA non-coding upstream 65263 298411 ~ 298726 (+)
G40768 NA non-coding downstream 116143 488407 ~ 493026 (+)
G40852 NA non-coding downstream 156864 529128 ~ 551356 (+)
G40904 NA non-coding downstream 254469 626733 ~ 630432 (+)
CI01000006_00666971_00667988 NA non-coding downstream 285438 666793 ~ 668405 (+)
G40935 NA non-coding downstream 342640 714904 ~ 715650 (+)
G40772 NA other downstream 103201 475465 ~ 479194 (+)
G40767 NA other downstream 108368 360009 ~ 484185 (+)
G41170 NA other downstream 1319801 1692065 ~ 1695821 (+)
G41424 NA other downstream 2273398 2645662 ~ 2660570 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location