CI01000006_05765933_05767517


Basic Information

Item Value
gene id CI01000006_05765933_05767517
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 5765770 ~ 5767955 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_05765933_05767517.mRNA
ACAACCTCTCTTGTTTCCGTTTGAAGTTGTGAGAATCAGCATCACATGCTGGGTCGTAATGATTTAAGCTTTTATTCTCTGTTCTTATAAAAAAGAGTTGGCAGAACATGGAAATAGTGGCAAGAATTATGAAGCAAGGAAGTGTGGTTTAACCTCAGCGAGAGAAGAAGAAAGAGAAAAAAAAAAAAAAAGAAAAAAAAACACCAATGGAAAACCATTTGGAGGTTGAGAATCGCAAAAGAGACTGCAGAAAATAAACAAAAGAGGGGGGTGAGAGAAAACTTGCAATGCATCCAAAATCCTGATGGCTGTCTTCTAGATGGGGATTGTGGAGACCCAACAAACAAAGAGAAGAATGAAGAAGCAAAGCCCTTTGGCAAGCTGCAAGTAATTAAAAAGGCCTGTAAACGCCTTCCAGGATAAAGGGCACTTCAAAAGATGGGCGGGCGAGTGAGCGCGCGAGAGGGAGCTGGGAAAAGCCAGGGGTGCTTTGGAAGCGAGGGCGACCCTGGATATGACATGCTCAAACCTGCTTCTAGCATGGAGTGCGGCAGCAGTCCTATCGTAAAGGCAAAGTTGCTGGGTCACCTGCCCCTGCAATTACTACAAGTTCTATTTTCTGGACAACCAGAAGCCTCCCAACCAGCTGTGCTCTGGTCTCAGAAACTGTAGATGGTGAGTGTGTGAAAGCAGAAGAGAAAAGGGAGGGGTGGCACTCCGTGTGCCTGAAACAGACTGACTGTAGTCATTAAGGAAGCAGGCATAAAACTCTCAAGCCATTTACTCAGTTAATAAGCGACTTTGTCTAACAGTCAGTTTTGACAACGGCAATAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_05765933_05767517.mRNA True 835 mRNA 0.45 3 5765770 5767955

Neighbor

gene id symbol gene type direction distance location
CI01000006_05511463_05544650 NA coding downstream 221068 5511164 ~ 5544702 (-)
CI01000006_05448821_05457372 NA coding downstream 307061 5448626 ~ 5458709 (-)
CI01000006_05319715_05320035 NA coding downstream 445495 5319069 ~ 5320275 (-)
CI01000006_05264663_05267612 NA coding downstream 497897 5264119 ~ 5267873 (-)
CI01000006_05096922_05124527 CADM1A, CADM1B, CADM1 coding downstream 641243 5096922 ~ 5124527 (-)
CI01000006_05779467_05807100 NA coding upstream 11259 5779011 ~ 5807580 (-)
CI01000006_05850448_05859387 HTR3A coding upstream 82272 5850227 ~ 5860193 (-)
CI01000006_05862907_05869344 HTR3B coding upstream 94622 5862577 ~ 5869344 (-)
CI01000006_05926154_05927110 NA coding upstream 158199 5926154 ~ 5928105 (-)
CI01000006_05931700_05932761 LPAR6B coding upstream 163165 5931120 ~ 5932779 (-)
G44232 NA non-coding downstream 41131 5699752 ~ 5724639 (-)
G44347 NA non-coding downstream 70484 5695003 ~ 5695286 (-)
G44237 NA non-coding downstream 71668 5692911 ~ 5694102 (-)
G44346 NA non-coding downstream 72985 5692462 ~ 5692785 (-)
G44345 NA non-coding downstream 73786 5690881 ~ 5691984 (-)
G44451 NA non-coding upstream 6491 5774446 ~ 5775325 (-)
G44452 NA non-coding upstream 7711 5775666 ~ 5776117 (-)
G44353 NA non-coding upstream 9744 5777699 ~ 5778599 (-)
G44453 NA non-coding upstream 16340 5784295 ~ 5784762 (-)
CI01000006_04560607_04560993 NA other downstream 1203702 4559509 ~ 4562068 (-)
G43549 NA other downstream 1410342 4352510 ~ 4355428 (-)
G43102 NA other downstream 2831786 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 3139584 2624436 ~ 2626776 (-)
G42934 NA other downstream 3183564 2523776 ~ 2582206 (-)
CI01000006_06974359_06976736 NA other upstream 1205269 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 1735190 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 4714901 10453613 ~ 10484006 (-)
G47658 NA other upstream 5262956 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 5882408 11650363 ~ 11654424 (-)

Expression


Co-expression Network