Gene
RNA
| Item | Value |
|---|---|
| gene id | G42934 |
| gene name | NA |
| gene type | misc |
| species | grasscarp (Ctenopharyngodon idella) |
| category of species | economic fish |
| Item | Value |
|---|---|
| chromosome id | CI01000006 |
| NCBI id | null |
| chromosome length | 13024002 |
| location | 2523776 ~ 2582206 (-) |
| genome version | v1_2015/06_NatureGenetics_grasscarp_Genome |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| TU48752 | False | 775 | lncRNA | 0.44 | 4 | 2523776 | 2557977 |
| TU48754 | False | 988 | lncRNA | 0.44 | 6 | 2523776 | 2580144 |
| TU48753 | True | 891 | TUCP | 0.38 | 3 | 2568913 | 2582206 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| CI01000006_02481958_02482821 | PURA, PURAB, PURAA, PURA.L | coding | downstream | 40648 | 2481395 ~ 2483128 (-) |
| CI01000006_02448953_02467739 | NA | coding | downstream | 56037 | 2447950 ~ 2467739 (-) |
| CI01000006_02297635_02343401 | PPP3CA, PPP3CB | coding | downstream | 180375 | 2297082 ~ 2343401 (-) |
| CI01000006_02285649_02294759 | NA | coding | downstream | 227282 | 2284994 ~ 2296494 (-) |
| CI01000006_02262424_02271592 | DNAJC18 | coding | downstream | 252184 | 2261937 ~ 2271592 (-) |
| CI01000006_02617160_02621622 | OTUB1, OTUB1A, OTUB1B | coding | upstream | 36986 | 2617130 ~ 2621622 (-) |
| CI01000006_02624725_02626124 | COX8A | coding | upstream | 44311 | 2624436 ~ 2626776 (-) |
| CI01000006_02634636_02643446 | SLC22A6L | coding | upstream | 54144 | 2634288 ~ 2643446 (-) |
| CI01000006_02648355_02660501 | PYGMB, PYGM, PYGMA | coding | upstream | 66264 | 2646408 ~ 2660801 (-) |
| CI01000006_02689895_02705309 | NA | coding | upstream | 109511 | 2689655 ~ 2708567 (-) |
| G42913 | NA | non-coding | downstream | 37030 | 2486225 ~ 2486746 (-) |
| G42912 | NA | non-coding | downstream | 37662 | 2485899 ~ 2486114 (-) |
| G42910 | NA | non-coding | downstream | 38459 | 2485096 ~ 2485317 (-) |
| G42905 | NA | non-coding | downstream | 91193 | 2432033 ~ 2432583 (-) |
| G42890 | NA | non-coding | downstream | 107815 | 2415741 ~ 2415961 (-) |
| G42987 | NA | non-coding | upstream | 90139 | 2670283 ~ 2671713 (-) |
| G42986 | NA | non-coding | upstream | 97578 | 2677722 ~ 2681500 (-) |
| G43005 | NA | non-coding | upstream | 129380 | 2709524 ~ 2710052 (-) |
| G43084 | NA | non-coding | upstream | 276824 | 2856968 ~ 2859398 (-) |
| G42667 | NA | other | downstream | 633020 | 1888988 ~ 1890756 (-) |
| G42692 | NA | other | downstream | 735142 | 1785501 ~ 1788634 (-) |
| G42285 | NA | other | downstream | 2167637 | 355813 ~ 356139 (-) |
| G43102 | NA | other | upstream | 328307 | 2908451 ~ 2933984 (-) |
| G43549 | NA | other | upstream | 1772366 | 4352510 ~ 4355428 (-) |
| CI01000006_04560607_04560993 | NA | other | upstream | 1979365 | 4559509 ~ 4562068 (-) |
| CI01000006_06974359_06976736 | NA | other | upstream | 4393080 | 6973224 ~ 6976872 (-) |
| CI01000006_07500281_07507754 | NA | other | upstream | 4923001 | 7500246 ~ 7507976 (-) |
| CI01000006_02516145_02524371 | NA | coding | downstream | 43104 | 2516129 ~ 2525809 (-) |
