CI01000006_05319715_05320035


Basic Information

Item Value
gene id CI01000006_05319715_05320035
gene name NA
gene type coding
species grasscarp (Ctenopharyngodon idella)
category of species economic fish

Chromosome Information

Item Value
chromosome id CI01000006
NCBI id null
chromosome length 13024002
location 5319069 ~ 5320275 (-)
genome version v1_2015/06_NatureGenetics_grasscarp_Genome

Sequence

>CI01000006_05319715_05320035.mRNA
AGAATTTCTTCGCATTTTGCCTCATCAGATATTCTTGCTGTTGTTACTGTGTATATTTCTGAGTCTCCTCTTGCATGAAAAGCAAGTTGCGTCATTAGTGATAAAACGTTACAGACAGGCCATTTTGTCTCGAAAAGCTGCTCATTAAATAAAGGTTGTGGACAATTAAAGTCTTTGTTACTGTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTTGCTTTGCAGCCCTGATTTTCAGACATGGATGGAAATAATGAGACACACCGGTGGCTGCTGTCTTCCTCAGTCTTGCTTTCAACTAAACAATTCCTTTTTGCTGAAGAGGGCACATATGCGGGCACACTGAATACCAAGTGGTTGATATTTACCAATGAACATGACATACAACACTGGCCCACTTTGTCATTAGCCCCCTGTCATTCCCAGGGAGTCTGGGCAGGTGCTAATCAGCATGCTAATTGTAATATTGTGTCGTTGGCACTGTGGCTGAGGAGCCAGGGGCCGGGTTCGGAACCCCGCTGGATCGAGTGCATTGTGACGTCTTGCATTCTCACTCATTAACGCGATTGTTTTCCAGGTTTCGGCATTTAACGAGGCACTTACAGTAATTCTGTGGCTGAACATCGCCAACGAAGCCTTCTGGGGGCCTGGCTCTCCCGTCTGGCGCACCCAACATCCGCGCTGGGAGTCTGAGGGATTGTTGTTGGCTTTATTTCTGCTTTAACCCCCTCTTATCTGAGCATGAGGAGCTCTGCTCTGATCCACCCTGTCAGGGAACAAGATGTCGAGCTTGGAGTGTTTTCCTAGCCTTATCTGTGATGTTGGAAAAGCATTTCAGTGGAAAATGAGCTTAGTGAAGATATAAGCCTCACAGTAATTTGCTTATGCTATCCTAGTGTTTTTCTTTCTTTTTTTTTTTTGGTCGCTATCAGATAAAAGCTACAGTATGCAAGTGAAATTGTGCTATCTGTCATCTCGTATACCTAATGGTTAAATTTGAATAGGTGGAAAAGAAGGCTGCTTATATTTTCAAGCTGTCTCTCAGCATGGTCAGAGGATTGTTGCTGTATCCTATCGCTCTGTCCCTGAAGCGCTTGACATTTCTTTAAGTGTTTGTCACAATTTCAGAATGTCATTCTTGATGTGCTTATCATGTGCTTAAGTGTTTGGCACAGCTTCATAATGTCATACATTCTCAGATATTAAA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
CI01000006_05319715_05320035.mRNA True 1207 mRNA 0.42 1 5319069 5320275

Neighbor

gene id symbol gene type direction distance location
CI01000006_05264663_05267612 NA coding downstream 51196 5264119 ~ 5267873 (-)
CI01000006_05096922_05124527 CADM1A, CADM1B, CADM1 coding downstream 194542 5096922 ~ 5124527 (-)
CI01000006_05050241_05081653 NA coding downstream 237167 5049642 ~ 5081902 (-)
CI01000006_04987990_04988532 ANC13, ANAPC13.2.L, ANAPC13, ANAPC13.1 coding downstream 330537 4987819 ~ 4988879 (-)
CI01000006_04883687_04890017 NA coding downstream 428512 4883376 ~ 4890557 (-)
CI01000006_05448821_05457372 NA coding upstream 128351 5448626 ~ 5458709 (-)
CI01000006_05511463_05544650 NA coding upstream 190889 5511164 ~ 5544702 (-)
CI01000006_05765933_05767517 NA coding upstream 445495 5765770 ~ 5767955 (-)
CI01000006_05779467_05807100 NA coding upstream 458939 5779011 ~ 5807580 (-)
CI01000006_05850448_05859387 HTR3A coding upstream 529952 5850227 ~ 5860193 (-)
G43773 NA non-coding downstream 293171 5023211 ~ 5025898 (-)
G43769 NA non-coding downstream 326231 4990468 ~ 4992838 (-)
G43738 NA non-coding downstream 356315 4962234 ~ 4962754 (-)
G43860 NA non-coding upstream 52821 5373096 ~ 5373322 (-)
G44223 NA non-coding upstream 113157 5433432 ~ 5433829 (-)
G44229 NA non-coding upstream 123132 5443407 ~ 5443774 (-)
G44292 NA non-coding upstream 233798 5554073 ~ 5557029 (-)
G44234 NA non-coding upstream 324159 5644434 ~ 5677023 (-)
CI01000006_04560607_04560993 NA other downstream 757001 4559509 ~ 4562068 (-)
G43549 NA other downstream 963641 4352510 ~ 4355428 (-)
G43102 NA other downstream 2385085 2908451 ~ 2933984 (-)
CI01000006_02624725_02626124 COX8A other downstream 2692883 2624436 ~ 2626776 (-)
G42934 NA other downstream 2736863 2523776 ~ 2582206 (-)
CI01000006_06974359_06976736 NA other upstream 1652949 6973224 ~ 6976872 (-)
CI01000006_07500281_07507754 NA other upstream 2182870 7500246 ~ 7507976 (-)
CI01000006_10453630_10483241 NA other upstream 5162581 10453613 ~ 10484006 (-)
G47658 NA other upstream 5710636 11030911 ~ 11033127 (-)
CI01000006_11651067_11653761 SMD3, SNRPD3, SNRPD3L, MGC52856 other upstream 6330088 11650363 ~ 11654424 (-)

Expression


Co-expression Network